For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MARSPIGRQQLLDAAREELVCGGGVIDLSGLTRRAGLSTGALYHHFGSKAGLLVVIYDDFYDGLVHAIAD THLDLETEWRVHEFERTRRFVDYHMTDPLAPILLNRSALDPQLAELEATYLQRISHNAGKNIRRGQKLGQ LPVDIDPDSAGAFIIGGIRHGIAQQLRVGPLPDPGIVTARLWRLISAALGVA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_2593 | - | - | 100% (192) | putative transcriptional regulator, TetR |
| M. abscessus ATCC 19977 | MAB_1525c | - | 2e-06 | 24.35% (193) | TetR family transcriptional regulator |
| M. abscessus ATCC 19977 | MAB_3078 | - | 2e-05 | 33.75% (80) | TetR family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_4672 | - | 3e-05 | 28.57% (154) | TetR family transcriptional regulator |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | MAV_1141 | - | 7e-07 | 25.65% (191) | transcriptional regulator, TetR family protein |
| M. smegmatis MC2 155 | MSMEG_1565 | - | 2e-06 | 29.41% (153) | transcriptional regulator, TetR family protein |
| M. thermoresistible (build 8) | TH_2719 | - | 1e-05 | 27.44% (164) | PUTATIVE - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_5881 | - | 2e-05 | 36.67% (60) | TetR family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
MAV_1141|M.avium_104 --------------------------MARQVRSEATRQKILDSAIEVFGE
TH_2719|M.thermoresistible__bu ------------------------MASRRAQISEESRRLLIAAATELFAE
MAB_2593|M.abscessus_ATCC_1997 -----------------------------MARSPIGRQQLLDAAREELVC
Mflv_4672|M.gilvum_PYR-GCK MSELAKTAPRRGGQPANGTGSSGAARRGNRLPRDERRGQLLAAASEVFVD
MSMEG_1565|M.smegmatis_MC2_155 --------------MRQTRAARSGPGRPAGTDSVDTRQRVIDAACRCFAQ
Mvan_5881|M.vanbaalenii_PYR-1 -----------------MTSPPTKPPTTRQQGAARTRNALIDAGFRLAAS
* :: :. .
MAV_1141|M.avium_104 VGYAAAGWSTIIERTGMTKGALYHHFDSKESLASNIIEEGSDRLLSAFRN
TH_2719|M.thermoresistible__bu QGFRRTTFADIAERSGISRGSIPWHFGNKDGLLRAVIED----FIAGVIE
MAB_2593|M.abscessus_ATCC_1997 GG-GVIDLSGLTRRAGLSTGALYHHFGSKAGLLVVIYDDFYDGLVHAIAD
Mflv_4672|M.gilvum_PYR-GCK RGYHAAGMDEIADRAGVSKPVLYQHFSSKVELYLAVLQRHVDNLVSGVRQ
MSMEG_1565|M.smegmatis_MC2_155 FGYGPATNNQIAEMAGVTAGSVYYHFGTKNKLFEAVCDDVYGKILTRVML
Mvan_5881|M.vanbaalenii_PYR-1 GGLVGLSVNRIVEDAAVSKGSFFHHFGDRASYLVALHRDFHDRILTEALA
* : :.:: . **. : : ::
MAV_1141|M.avium_104 VCGSSS-PGLENLVHGTFTIVEVLRSDKMVRAAAQLATALSGFNGAASRF
TH_2719|M.thermoresistible__bu LDAS-----EQTLSEGLDRIRDYVRR-PTTRLLITLVAEAVEPDSPVHAF
MAB_2593|M.abscessus_ATCC_1997 THLDLETEWRVHEFERTRRFVDYHMTDPLAPILLNRSALDPQLAELEATY
Mflv_4672|M.gilvum_PYR-GCK ALRTTT-DNRQRVRAAVQAFFDFIEHDSQGYRLIFENDYVTEPQVAAQVK
MSMEG_1565|M.smegmatis_MC2_155 AVSGSHSVVGLLRAVLTESMRINHESPELAGFVATAPIDARRHRELAESF
Mvan_5881|M.vanbaalenii_PYR-1 IIDGSA-PGARRLAIASRAYLDSCLTNRAVRALLLEARAEPAINDAVRQR
MAV_1141|M.avium_104 YAN---LVLETAQEARRAIKEGDLRDDIDPDVLSASLMGTIFGARLIAST
TH_2719|M.thermoresistible__bu YAQ---LHDTLRKWLSDWIDDKDIPPGVSRENFVTVLIGAVIG-------
MAB_2593|M.abscessus_ATCC_1997 LQR---ISHNAGKNIRRGQKLGQLPVDIDPDSAGAFIIGGIRHG------
Mflv_4672|M.gilvum_PYR-GCK VAT---ESCTDAVFDLISHDSGLEPHRARMIAVGLVSISVDSAR------
MSMEG_1565|M.smegmatis_MC2_155 ATQGARMADALTDAVRSGQDAGDIAADLDPVRVARLISAVVDG-------
Mvan_5881|M.vanbaalenii_PYR-1 NSD-------TADLIEPDFTAMGWPHPRRAAQLWIGMTAEA---------
.
MAV_1141|M.avium_104 ISGHGRIGDIIGDPTARLHQIWSLLLPGIVSQASLPYFEQFLRREGMRHA
TH_2719|M.thermoresistible__bu -----------------VHQQWRVAPHHVDLDACFAALKQLASGD-----
MAB_2593|M.abscessus_ATCC_1997 -----------------IAQQLRVGPLPDPGIVTARLWRLISAALGVA--
Mflv_4672|M.gilvum_PYR-GCK ---------------YWLNNERPIDKDDAVEGTVQFIWGGLSHVPLTRS-
MSMEG_1565|M.smegmatis_MC2_155 ------------------FAHAAVSADPDEMDNMNELFQSLLLDTT----
Mvan_5881|M.vanbaalenii_PYR-1 -------------------ALLEFDAGHKLTDLRASLARYIDADPALLGN
. :
MAV_1141|M.avium_104 TANPGAEPEGE
TH_2719|M.thermoresistible__bu -----------
MAB_2593|M.abscessus_ATCC_1997 -----------
Mflv_4672|M.gilvum_PYR-GCK -----------
MSMEG_1565|M.smegmatis_MC2_155 -----------
Mvan_5881|M.vanbaalenii_PYR-1 -----------