For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
DAEGFITLVDRKKDMIISGGENVYPIEVEQVLFRHPAVFDAAVIGGKDAKWGERVVAVVVADPATQAPSA EEIVAWCRERLAHFKCPRDVHFVAELPRNATGKLLKTELRAQFTGIEGGVVLR*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. abscessus ATCC 19977 | MAB_2062c | - | - | 100% (124) | long-chain-fatty-acid--CoA ligase |
M. abscessus ATCC 19977 | MAB_3592c | - | 1e-30 | 56.36% (110) | putative medium-chain acyl-CoA ligase |
M. abscessus ATCC 19977 | MAB_4559 | - | 1e-25 | 48.25% (114) | putative long-chain-fatty-acid CoA ligase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3116 | fadD13 | 3e-28 | 52.17% (115) | chain-fatty-acid-CoA ligase |
M. gilvum PYR-GCK | Mflv_4616 | - | 2e-57 | 82.40% (125) | AMP-dependent synthetase and ligase |
M. tuberculosis H37Rv | Rv3089 | fadD13 | 3e-28 | 52.17% (115) | chain-fatty-acid-CoA ligase |
M. leprae Br4923 | MLBr_02546 | fadD2 | 7e-22 | 45.45% (110) | acyl-CoA synthetase |
M. marinum M | MMAR_0452 | fadD4 | 6e-28 | 50.00% (118) | fatty-acid-CoA ligase FadD4 |
M. avium 104 | MAV_3523 | - | 1e-33 | 60.53% (114) | acyl-CoA synthase |
M. smegmatis MC2 155 | MSMEG_0131 | - | 7e-29 | 52.85% (123) | acyl-CoA synthetase |
M. thermoresistible (build 8) | TH_2878 | - | 5e-28 | 54.87% (113) | PUTATIVE AMP-binding enzyme, putative |
M. ulcerans Agy99 | MUL_1191 | fadD2 | 5e-23 | 46.36% (110) | acyl-CoA synthetase |
M. vanbaalenii PYR-1 | Mvan_0943 | - | 2e-30 | 57.02% (114) | AMP-dependent synthetase and ligase |
CLUSTAL 2.0.9 multiple sequence alignment Mb3116|M.bovis_AF2122/97 -------------------------------------------------- Rv3089|M.tuberculosis_H37Rv -------------------------------------------------- MAB_2062c|M.abscessus_ATCC_199 -------------------------------------------------- Mflv_4616|M.gilvum_PYR-GCK -------------------------------------------------M MSMEG_0131|M.smegmatis_MC2_155 -------------------------------------MTAEPSQIEQPYL TH_2878|M.thermoresistible__bu --------------------------------------------LQQPYL MAV_3523|M.avium_104 -----------------------------------------------MPA Mvan_0943|M.vanbaalenii_PYR-1 -------------------------------------------------- MMAR_0452|M.marinum_M -------------------------------------------------- MLBr_02546|M.leprae_Br4923 ---------MTKLRHYLERGAAEVHYLRSIFESGALGFEPPLTYAAMAVA MUL_1191|M.ulcerans_Agy99 MPNLSDLPGVAKIQQYVDRGAAELHYVRKIIESGAFRLESPLNYAAMATE Mb3116|M.bovis_AF2122/97 ---MKNIGWMLRQRATVSPRLQAYVEPSTDVRMTYAQMNALANRCADVLT Rv3089|M.tuberculosis_H37Rv ---MKNIGWMLRQRATVSPRLQAYVEPSTDVRMTYAQMNALANRCADVLT MAB_2062c|M.abscessus_ATCC_199 -------------------------------------------------- Mflv_4616|M.gilvum_PYR-GCK DRGIGQWV---TKRAFLNGQRTALVQG--DTSFTYSDFDRRTNQVASSLL MSMEG_0131|M.smegmatis_MC2_155 ARRQ-NWVNQLTRHAMMQPDKTALRFL--GRTTTWRELDDRVTRLAGALN TH_2878|M.thermoresistible__bu ARRQ-NWVNHLARHALMQPDATALRFM--GQTTTWADLHHRVNRLAGALR MAV_3523|M.avium_104 AETRETLAGIVERHAQRRPDAIAIRYG--ERQWSWAEWSSRIRRAAGALR Mvan_0943|M.vanbaalenii_PYR-1 --MIHNLADIIRVHGRERPGAPALVVG--DRTVTYGELDDRSSRAAQAFA MMAR_0452|M.marinum_M ----------MQIRQHVGADKPAVILHPSGTVVSFDELEARANRLAHRFR MLBr_02546|M.leprae_Br4923 MRKWGDLAMLPAMPARRSPHRAALIDE--EGTLTYKELDRAAHALANGLI MUL_1191|M.ulcerans_Agy99 IAKWGEFGMLPSFNARRHPHRAACIDE--EGEFTYQQLDEAGHAVANALL Mb3116|M.bovis_AF2122/97 ALGIAKGDRVALLMPNSVEFCCLFYGAAKLGAVAVPINTRLAAPEVSFIL Rv3089|M.tuberculosis_H37Rv ALGIAKGDRVALLMPNSVEFCCLFYGAAKLGAVAVPINTRLAAPEVSFIL MAB_2062c|M.abscessus_ATCC_199 -------------------------------------------------- Mflv_4616|M.gilvum_PYR-GCK RLGVRKGDRVAILLVNSVEFLEVLLGCAKIGAITIPINVRLAGPEIGYIL MSMEG_0131|M.smegmatis_MC2_155 RRGVGFGDRVLILMLNRTEFVEAMLAANRLGAIAVPVNFRMTPPEIAYLV TH_2878|M.thermoresistible__bu RRGVEFGDRVLILMLNRTEFIETMLAANRLGAIAVPVNFRMTPPEIAFLA MAV_3523|M.avium_104 GDGIERGQCVAFLDKNHPACLEVLIGGASVGAVTTVVNWRVIGDELVHVL Mvan_0943|M.vanbaalenii_PYR-1 QAGVGVGDRVAFVDKNGAEFFEVTFGLAKVGAVGVPVNWRLAAPEMRHII MMAR_0452|M.marinum_M RAGLREGDAVAILMENNEHIHAVMWAARRSGLYYVPINTHLTAAEAAYII MLBr_02546|M.leprae_Br4923 AKGVRGGDGIAILARNHRWFVIANYGCARVGARIILLNSEFSGPQIKEVS MUL_1191|M.ulcerans_Agy99 AKGVSAGDGVAILARNHRWFLIANYGAARAGARIILLNSEFSGPQIKEVS Mb3116|M.bovis_AF2122/97 SDSGSKVVIYGAPSAPVIDAIRAQADPPGTVTDWIG---------ADSLA Rv3089|M.tuberculosis_H37Rv SDSGSKVVIYGAPSAPVIDAIRAQADPPGTVTDWIG---------ADSLA MAB_2062c|M.abscessus_ATCC_199 -------------------------------------------------- Mflv_4616|M.gilvum_PYR-GCK ADSGADVFVFHAPLAAAAVSALTEPGVRVRHTLRAGGAPADG---EIPYT MSMEG_0131|M.smegmatis_MC2_155 SDCEAHVVVTEPVLAGVAT-AVRDLDATLQTVIVAGGATEDG---VLGYD TH_2878|M.thermoresistible__bu KDCEAKVIATEPVLAGVAT-AVRDLAPSLSSVIVAGAADGSDTPDVLDYE MAV_3523|M.avium_104 ADSGARVLVVGAELRPAAEAAARRVPSLERIIEVG-----------DEYE Mvan_0943|M.vanbaalenii_PYR-1 ADSGAKIVVVGQDFAGHLEAIEDGLDADIVVIGDHPRW--------PAFD MMAR_0452|M.marinum_M ENSGAKAIVGSAALRDTCAGLGEHLRAGPPELLILAGPEG----CLTGWE MLBr_02546|M.leprae_Br4923 EREGAKVIIYDDEYTKVVSKAEPALG-KLRALGVNPDEEEPPGSTDETLA MUL_1191|M.ulcerans_Agy99 EREGAKLIIYDDEYTGAVSKAEPPLG-KLRALGVNPDSEEDSGSTDETLA Mb3116|M.bovis_AF2122/97 ERLRSAAADEPAVECGGDDNLFIMYTSGTTGHPKGVVHTHESVHSAASS- Rv3089|M.tuberculosis_H37Rv ERLRSAAADEPAVECGGDDNLFIMYTSGTTGHPKGVVHTHESVHSAASS- MAB_2062c|M.abscessus_ATCC_199 -------------------------------------------------- Mflv_4616|M.gilvum_PYR-GCK DLLSDGAPAPLDSDVEGRDPAFIMYTSGTTGRPKGAILTHDNLRWNAIN- MSMEG_0131|M.smegmatis_MC2_155 DLIAEEGEPPAPVDIPNDSPALIMYTSGTTGRPKGAVLTHTNLSAQAMM- TH_2878|M.thermoresistible__bu ALIAEPGEDPPPVDIPDDSPALIMYTSGTTGNPKGAVLTHSNLTGQAMT- MAV_3523|M.avium_104 SLLAAAEPAPSDAGVDTDETALVIYSSGTTGRPKGVLLSQRALVNHAAN- Mvan_0943|M.vanbaalenii_PYR-1 DWVASHPPVDPGVVTGPDDVVLLMYTSGTTGAPKGVMLSNTNYVYKTGG- MMAR_0452|M.marinum_M PYPQCVADQPDTAIDDELEGDLLQYSSGTTGRPKGIKRELLHVAPDAAPG MLBr_02546|M.leprae_Br4923 ELIARSSSAPAPKVR--KRASIIILTSGTTGTPKGANRNTPASLAPLGG- MUL_1191|M.ulcerans_Agy99 ELIARSSTAPAPKAG--KHASIIILTSGTTGTPKGANRSTPPTLAPVGG- Mb3116|M.bovis_AF2122/97 -WASTIDVRYR-DRLLLPLPMFHVAALTTVIFSAMR-GVTLISMPQ--FD Rv3089|M.tuberculosis_H37Rv -WASTIDVRYR-DRLLLPLPMFHVAALTTVIFSAMR-GVTLISMPQ--FD MAB_2062c|M.abscessus_ATCC_199 -------------------------------------------------- Mflv_4616|M.gilvum_PYR-GCK -VLGAEQGLTGSDVTVAVAPMFHIGGLGVHTLPLLYVGGTSVILPS--FD MSMEG_0131|M.smegmatis_MC2_155 -HLFTTGADLNSDVGFVGVPLFHIAGVAGSVLSGVTLGVPTVLYPLGAFD TH_2878|M.thermoresistible__bu -NLFTIGVDLANDVGFIGVPLFHIAGIAGNVLSGLTLGLPTVLYPLGAFD MAV_3523|M.avium_104 -LAPAFPFGDG-DANLVAMPLFHVGGIG-YALFGIRAGAPTIMTRE--PD Mvan_0943|M.vanbaalenii_PYR-1 -VAGPWQFDAD-AVSLAVMPLFHMAGSG-WALAGLWQGATTVVLRD--VE MMAR_0452|M.marinum_M MMSALVGYWMDADSIYLSPAPLYHTAPSVWSMSAQAGGITTVVLEK--FD MLBr_02546|M.leprae_Br4923 -ILSKVPFRAH-EVTLLPAPMFHALGYL-HATLAMFLGSTLVLRRR--FK MUL_1191|M.ulcerans_Agy99 -ILSHVPFKAN-EVTSLPAPMFHALGYL-HATIAMFLGSTLVLRRK--FK Mb3116|M.bovis_AF2122/97 ATKVWSLIVEERVCIGGAVPAILNFMRQVPEFAE--LDAPDFRYFITGGA Rv3089|M.tuberculosis_H37Rv ATKVWSLIVEERVCIGGAVPAILNFMRQVPEFAE--LDAPDFRYFITGGA MAB_2062c|M.abscessus_ATCC_199 -------------------------------------------------- Mflv_4616|M.gilvum_PYR-GCK PVGTLKAMAESRATVQFMVPAMWSALTQVPDFDS--YDLSALRLAMGGGA MSMEG_0131|M.smegmatis_MC2_155 PDGLLDVLESEQVTGIFLVPAQWQAVCAAQRARP--RNLKLRALSWG-AA TH_2878|M.thermoresistible__bu PGGLLDVLEAEKVTGIFLVPAQWQAVCAEQRARP--RDLRLRALSWG-AA MAV_3523|M.avium_104 AAALIGAVRAG-ATHAFFVPPVIARFLDAGEAAR--ASIAGLRYIVYGAA Mvan_0943|M.vanbaalenii_PYR-1 PAAILDAIARHRITNMLLVPAVIQFLLDTDGVAE--VDLSTLRVIVYGAS MMAR_0452|M.marinum_M PEGALEAIQRHRVTHAQFVPAMFTRMLKLPESIRNSYDVSSLKRVMHAAA MLBr_02546|M.leprae_Br4923 PATVLEDIEKHQATAMVVVPVMLSRILDTLENLETKSDLSSLRVVFVSGS MUL_1191|M.ulcerans_Agy99 PQLVLEDIEKHKVTAMVVVPVMLSRLLDAVEKIDKKPDLSSLKIVFVSGS Mb3116|M.bovis_AF2122/97 PMPEALIKIYAAKN--IEVVQGYALTESCGGGTLLLSEDA-----LRKAG Rv3089|M.tuberculosis_H37Rv PMPEALIKIYAAKN--IEVVQGYALTESCGGGTLLLSEDA-----LRKAG MAB_2062c|M.abscessus_ATCC_199 -------------------------------------------------- Mflv_4616|M.gilvum_PYR-GCK PMPLTVIDFMHQR--GVPFTEGFGMTETAPMVSVLDAANI-----TTRAG MSMEG_0131|M.smegmatis_MC2_155 PASDTLLREMNEVFPDAQIFAAFGQTEMSPVTCMLLGDDA-----IRKLG TH_2878|M.thermoresistible__bu PASDTLLQEMTEVFPGTKIFAAFGQTEMSPVTCMLLAEDA-----VRKLG MAV_3523|M.avium_104 PMPLPLLHRALSTWPGTKFVQVYGQTELCGAVTALSDDDHRDAARPQLQL Mvan_0943|M.vanbaalenii_PYR-1 PISDDVLVRGIERF-GPIFAQVYGMTETTGSITQLDGPDH----VPALLR MMAR_0452|M.marinum_M PCPVEIKKQMMDWWG--PIIDEYYASSEAIGSTLITAEDW-----LEHPG MLBr_02546|M.leprae_Br4923 QLGAELATRALEELG-PVIYNMYGSTEIAFATIAGPKDLQ------INSA MUL_1191|M.ulcerans_Agy99 QLGAELASRALKDLG-PVIYNMYGSTEIAFATIAGPEDLQ------RNAA Mb3116|M.bovis_AF2122/97 SAGRATMFTDVAVRGDDG--VIREHGEGEVVIKSDILLKEYWNRPEATRD Rv3089|M.tuberculosis_H37Rv SAGRATMFTDVAVRGDDG--VIREHGEGEVVIKSDILLKEYWNRPEATRD MAB_2062c|M.abscessus_ATCC_199 -------------------------------------------------- Mflv_4616|M.gilvum_PYR-GCK SIGRVAMHVDARIVDADD-RDVPADTVGELLVRGPNVFVGYWMKPATTAE MSMEG_0131|M.smegmatis_MC2_155 SVGRVIPTVSARVVDDNM-NDVPVGEVGEIVYRGPNLMVGYWNNPKATAE TH_2878|M.thermoresistible__bu SVGKVIPTVAARIVDDTM-NDVPVGEVGEIVYRAPTLMAGYWNNPQATAE MAV_3523|M.avium_104 SAGKAVQGCEIRIVDPNNCAELPAGRSGEVWVRSNQNMSGYLNRAEATAE Mvan_0943|M.vanbaalenii_PYR-1 SCGRPYPWVQIRIVDETG-ADAVAGTVGEVWTRSEQNMLGYWNNPDATAS MMAR_0452|M.marinum_M SVGKPMQG-GVHILGADG-VELPPGQAGEIYFEGG-YSFEYLNDPSKTAA MLBr_02546|M.leprae_Br4923 TVGPVVKGVKVKILDDSG-KEVPRGQVGRIFVGNAFPFEGYTGG----GG MUL_1191|M.ulcerans_Agy99 TVGPVVKGVKVKILDDNG-NEVSQGQVGRIFVGNAFPFEGYTGG----GH Mb3116|M.bovis_AF2122/97 AFDN-GWFRTGDIGEIDDEGYLYIKDRLKDMIISGGENVYPAEIESVIIG Rv3089|M.tuberculosis_H37Rv AFDN-GWFRTGDIGEIDDEGYLYIKDRLKDMIISGGENVYPAEIESVIIG MAB_2062c|M.abscessus_ATCC_199 ---------------MDAEGFITLVDRKKDMIISGGENVYPIEVEQVLFR Mflv_4616|M.gilvum_PYR-GCK AFRG-GWFHTGDLGRIDADGYITLVDRKKDMIISGGENVYPIEVEQVLFR MSMEG_0131|M.smegmatis_MC2_155 AFAG-GWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLAA TH_2878|M.thermoresistible__bu AFAG-GWFHSGDLVRQDEEGYIWVVDRKKDMIISGGENIYCAEVENVLAA MAV_3523|M.avium_104 TITADGWVRTGDVGRLDADGYVYIEDRLKDMIITGGENVYGPEVESVLIE Mvan_0943|M.vanbaalenii_PYR-1 TLTADGWLKTGDAGYVDDDGYLFLHDRIKDMIVSGGENVYPVEVENVLMT MMAR_0452|M.marinum_M SRDKHGWVTVGDVGYLDDQGYLFLTDRRHHMIISGGVNIYPQEAENILVT MLBr_02546|M.leprae_Br4923 KQIIDGLLSSGDVGYFDEHDLLYISGRDDEMIVSGGENVFPAEVEDLISG MUL_1191|M.ulcerans_Agy99 KQIIDGLMSSGDVGYFDEHGLLYVSGRDDEMIVSGGENVFPAEVEALISG * .. : : .* ..**::** *:: * * :: Mb3116|M.bovis_AF2122/97 VPGVSEVAVIGLPDEKWGEIAAAIVVADQ---NEVSEQ-QIVEYCGTRLA Rv3089|M.tuberculosis_H37Rv VPGVSEVAVIGLPDEKWGEIAAAIVVADQ---NEVSEQ-QIVEYCGTRLA MAB_2062c|M.abscessus_ATCC_199 HPAVFDAAVIGGKDAKWGERVVAVVVADPAT-QAPSAE-EIVAWCRERLA Mflv_4616|M.gilvum_PYR-GCK HPGVLDAAVVGGPDDKWGERVVAVVVADPAAEQEPSAD-ELIAWCRERLA MSMEG_0131|M.smegmatis_MC2_155 HPAIMEVAVIGRPHEKWGEVPVAVVALNSATAESISLG-ELDSFLTERLA TH_2878|M.thermoresistible__bu HPAVAEVAVVGRPHEKWGEVPVAVVALN--PDAELTMA-ELEEFLADRLA MAV_3523|M.avium_104 HPAVVDAAVIGVPDDFWGESVKAIVVADG----DVDAA-DVIEFCRRHLA Mvan_0943|M.vanbaalenii_PYR-1 HPAVADAAVIGVPDRRWGEAVKAVVVAARGA--QLTEA-ELIAFARDRIG MMAR_0452|M.marinum_M HPKVMDAAVFGVPDDEMGQRVMAVVQTVDPADATSQFGDELMEWLRDRLS MLBr_02546|M.leprae_Br4923 HPEVVEATAIGVDDKEWGARLRAFVVKKQ---DATIDEDAIKAYVRDHLA MUL_1191|M.ulcerans_Agy99 HPDVVEATALGVDDKEWGARLRAFVVKKP---DTDLDEETVKHYVRDHLA * : :.:..* . * *.* : : ::. Mb3116|M.bovis_AF2122/97 RYKLPKKVIFAEAIPRNPTGKILKTVLREQYSAT--VPK----------- Rv3089|M.tuberculosis_H37Rv RYKLPKKVIFAEAIPRNPTGKILKTVLREQYSAT--VPK----------- MAB_2062c|M.abscessus_ATCC_199 HFKCPRDVHFVAELPRNATGKLLKTELRAQFTG---IEGGVVLR------ Mflv_4616|M.gilvum_PYR-GCK HFKCPREVHLLPELPRNATGKLLKTELRKRFTG---VEGGVVQR------ MSMEG_0131|M.smegmatis_MC2_155 RYKHPKALEVVDALPRNPSGKVLKTELRERFGRATSLDGGESNSATTVSA TH_2878|M.thermoresistible__bu RYKHPKVLEIVDALPRNPAGKVLKTELRARFAAGPSAEKEQSSSGATTSA MAV_3523|M.avium_104 GFKCPRTVDFVAELPRNASGKILKTQLREPFWRD--RDRRV--------- Mvan_0943|M.vanbaalenii_PYR-1 GFKLPKSVDFVDVLPRNPSGKLLKRALREPYWDG--ADRHIG-------- MMAR_0452|M.marinum_M HFKCPRSVAFEAQLPRTDTGKLYKNGLIEKYSG----------------- MLBr_02546|M.leprae_Br4923 RYKVPREVIFLEELPRNPTGKVLKRELRDFEVH----------------- MUL_1191|M.ulcerans_Agy99 RYKVPREVIFLEELPRNPTGKILKRELREMEIE----------------- :* *: : . :**. :**: * * Mb3116|M.bovis_AF2122/97 --- Rv3089|M.tuberculosis_H37Rv --- MAB_2062c|M.abscessus_ATCC_199 --- Mflv_4616|M.gilvum_PYR-GCK --- MSMEG_0131|M.smegmatis_MC2_155 G-- TH_2878|M.thermoresistible__bu GSS MAV_3523|M.avium_104 --- Mvan_0943|M.vanbaalenii_PYR-1 --- MMAR_0452|M.marinum_M --- MLBr_02546|M.leprae_Br4923 --- MUL_1191|M.ulcerans_Agy99 ---