For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
DFAQRTIDLARRNVEEGGRPFATIIVKDGAVLAESPNRVAQTNDPTAHAEILAIREACTRLGTEHLAGST IFILALPCPMCLGALYYCSPDEVVFLTTREAYQPHYVDDRKYFEFNTFYGEFAKPWDRRRLPMHYQARDD AVDVYRLWQERNGGNRHVAGAPTAT*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. abscessus ATCC 19977 | MAB_0053c | - | - | 100% (166) | cytidine/deoxycytidylate deaminase |
| M. abscessus ATCC 19977 | MAB_0268 | - | 3e-10 | 42.67% (75) | cytidine/deoxycytidylate deaminase family protein |
| M. abscessus ATCC 19977 | MAB_3459 | - | 8e-09 | 33.33% (96) | putative cytidine/deoxycytidylate deaminase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0851c | - | 2e-49 | 70.00% (130) | deaminase |
| M. gilvum PYR-GCK | Mflv_1214 | - | 4e-09 | 38.00% (100) | CMP/dCMP deaminase, zinc-binding |
| M. tuberculosis H37Rv | Rv0828c | - | 2e-49 | 70.00% (130) | deaminase |
| M. leprae Br4923 | MLBr_02474 | - | 3e-10 | 41.67% (84) | putative cytidine/deoxycytidylate deaminase |
| M. marinum M | MMAR_4851 | - | 4e-69 | 74.39% (164) | deaminase |
| M. avium 104 | MAV_0777 | - | 9e-72 | 74.85% (163) | cytidine/deoxycytidylate deaminase |
| M. smegmatis MC2 155 | MSMEG_3575 | - | 9e-10 | 32.00% (100) | cytidine/deoxycytidylate deaminase, zinc-binding region |
| M. thermoresistible (build 8) | TH_1653 | - | 6e-11 | 44.00% (75) | POSSIBLE CYTIDINE/DEOXYCYTIDYLATE DEAMINASE |
| M. ulcerans Agy99 | MUL_0449 | - | 2e-34 | 78.57% (84) | hypothetical protein MUL_0449 |
| M. vanbaalenii PYR-1 | Mvan_5594 | - | 2e-10 | 44.00% (75) | CMP/dCMP deaminase, zinc-binding |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_1214|M.gilvum_PYR-GCK -----------------MTDEDLIRAALDAARGAGPRDVPIGAVVFDAEG
Mvan_5594|M.vanbaalenii_PYR-1 MNRQFSSAGEPAIQSKQVTDEELIRAALDAARLAGPRDVPIGAVVFAPDG
TH_1653|M.thermoresistible__bu -------------MIGSVTDEDMIRAALTAAREAGPRDVPIGAVVFGPDG
MLBr_02474|M.leprae_Br4923 ---MPSAAGRRHQTRSVTTDEDLIRAALTVATTAGSRDVPIGAVVLGADG
Mb0851c|M.bovis_AF2122/97 ----------------------------------MPAGMAGFR-------
Rv0828c|M.tuberculosis_H37Rv ----------------------------------MPAGMAGFR-------
MMAR_4851|M.marinum_M -------------------MTDFAQRAIDLARQNVAEGGRPFATVIVKDG
MUL_0449|M.ulcerans_Agy99 -------------------MTDFAQRAIDFARLNVAEGGRPFATVIVKDG
MAV_0777|M.avium_104 -------------------MTDFARRTIDLARQNVAEGGRPFATVIVQDG
MAB_0053c|M.abscessus_ATCC_199 --------------------MDFAQRTIDLARRNVEEGGRPFATIIVKDG
MSMEG_3575|M.smegmatis_MC2_155 -------------MAISDADLKYLRRCVDLAREALDDGDEPFGSVLVDHT
.
Mflv_1214|M.gilvum_PYR-GCK TELARAANAREELGDPTAHAEILALRAAALVHGDGWRLEGATLAVTVEPC
Mvan_5594|M.vanbaalenii_PYR-1 RELARAANAREEFGDPTAHAEILALRAAARELGDGWRLEGATLAVTVEPC
TH_1653|M.thermoresistible__bu GELARAANAREQLGDPTAHAEVLALRAAARRLGDGWRLEGATLAVTVEPC
MLBr_02474|M.leprae_Br4923 NELARAVNAREAIGDPTAHAEILAMRAAAGTLGNGWRLEGTTLAVTVEPC
Mb0851c|M.bovis_AF2122/97 --------RWAQTNDPTAHAESLAIRAACTKLGT-EHLVGTTLNVLAHPC
Rv0828c|M.tuberculosis_H37Rv --------RWAQTNDPTAHAESLAIRAACTKLGT-EHLVGTTLNVLAHPC
MMAR_4851|M.marinum_M QVLAESANKVAQTNDPTAHAEILAIRAACTKLGT-EQLFGTTFYVLAHPC
MUL_0449|M.ulcerans_Agy99 QVLAESANKVAQTNDPTAHAEILAIRAACTKLGT-EQLFGTTFYVLAHPC
MAV_0777|M.avium_104 EVLAESANKAAQTNDPTAHAEILAIRAACLKLGT-EHLVDATIYVLAHPC
MAB_0053c|M.abscessus_ATCC_199 AVLAESPNRVAQTNDPTAHAEILAIREACTRLGT-EHLAGSTIFILALPC
MSMEG_3575|M.smegmatis_MC2_155 GTTLFEDRNRVKDGDATAHPEFAIARWAARHLTP-DRRARATVYTSGEHC
.*.***.* * *. : :*. *
Mflv_1214|M.gilvum_PYR-GCK TMCAGALVMARVARVVFG--------------AWEPKTGAVGSLWDVVRD
Mvan_5594|M.vanbaalenii_PYR-1 TMCAGALVMARVARVVFG--------------AWEPKTGAVGSLWDVVRD
TH_1653|M.thermoresistible__bu TMCAGALVLARVARLVFG--------------AWEPKTGAVGSLWDVVRD
MLBr_02474|M.leprae_Br4923 TMCAGALVLARIERLVFG--------------AWQPKTGAVGSLWDVVRD
Mb0851c|M.bovis_AF2122/97 PMCYGSLYYCSPDEVVFLTSRDAYEPHYVDDRRYFEPATFYDEFAKEWQD
Rv0828c|M.tuberculosis_H37Rv PMCYGSLYYCSPDEVVFLTSRDAYEPHYVDDRRYFEPATFYDEFAKEWQD
MMAR_4851|M.marinum_M PMCLGSLYYCSPDEVIFLTTRDIYEQYYVDDRKYFELATFYDEFAKAWQD
MUL_0449|M.ulcerans_Agy99 PMCLGS--------------------------------------------
MAV_0777|M.avium_104 PMCLGALYYCSPREVIFLTTRESYEPYYVDDRKYFELSNFYAEFAKPFDE
MAB_0053c|M.abscessus_ATCC_199 PMCLGALYYCSPDEVVFLTTREAYQPHYVDDRKYFEFNTFYGEFAKPWDR
MSMEG_3575|M.smegmatis_MC2_155 PMCAAAHAWVGLGRIVYAT-----------------SSAQLGGWLTEWGA
.** .:
Mflv_1214|M.gilvum_PYR-GCK RRLTHRPQVRGGVL--EAECAAPLEEFFARQR---------
Mvan_5594|M.vanbaalenii_PYR-1 RRLTHRPQVRGGVL--EAECAAPLEEFFAGQR---------
TH_1653|M.thermoresistible__bu RRLNHRPEVRGGVL--AAECAAPLEEFFARQRDPDSPRGLG
MLBr_02474|M.leprae_Br4923 HRLNHRPAVRGGVL--AQECTAPLEAFFAHQRLSKGPPVR-
Mb0851c|M.bovis_AF2122/97 RRLPMRQEHRPDIRAGAVDVYRFRQEPNGGERSAIAAPTG-
Rv0828c|M.tuberculosis_H37Rv RRLPMRQEHRPDIRAGAVDVYRFRQEPNGGERSAIAAPTG-
MMAR_4851|M.marinum_M RRLPMRYDPRPSA----VNVYRFWQELNGGKRAAAPDAAG-
MUL_0449|M.ulcerans_Agy99 ------------------------QELNGGKRAAAPNSAD-
MAV_0777|M.avium_104 RRLPMRYQPHPDA----VDVYRLWNERNGGRRRSTVVPSD-
MAB_0053c|M.abscessus_ATCC_199 RRLPMHYQARDDA----VDVYRLWQERNGGNRHVAGAPTAT
MSMEG_3575|M.smegmatis_MC2_155 QAPPVATLPINTVAP-GVVVDGPAEELAETMHNLYRAKFGR
: :