For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MPSAAGRRHQTRSVTTDEDLIRAALTVATTAGSRDVPIGAVVLGADGNELARAVNAREAIGDPTAHAEIL AMRAAAGTLGNGWRLEGTTLAVTVEPCTMCAGALVLARIERLVFGAWQPKTGAVGSLWDVVRDHRLNHRP AVRGGVLAQECTAPLEAFFAHQRLSKGPPVR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. leprae Br4923 | MLBr_02474 | - | - | 100% (171) | putative cytidine/deoxycytidylate deaminase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3778c | - | 3e-74 | 88.08% (151) | cytidine/deoxycytidylate deaminase |
| M. gilvum PYR-GCK | Mflv_1214 | - | 8e-64 | 79.05% (148) | CMP/dCMP deaminase, zinc-binding |
| M. tuberculosis H37Rv | Rv3752c | - | 3e-74 | 88.08% (151) | cytidine/deoxycytidylate deaminase |
| M. abscessus ATCC 19977 | MAB_0268 | - | 9e-61 | 76.19% (147) | cytidine/deoxycytidylate deaminase family protein |
| M. marinum M | MMAR_5295 | - | 2e-69 | 82.78% (151) | cytidine/deoxycytidylate deaminase |
| M. avium 104 | MAV_0324 | - | 1e-69 | 84.11% (151) | cytidine and deoxycytidylate deaminase family protein |
| M. smegmatis MC2 155 | MSMEG_6327 | - | 5e-63 | 79.73% (148) | cytidine and deoxycytidylate deaminase family protein |
| M. thermoresistible (build 8) | TH_1653 | - | 5e-68 | 80.39% (153) | POSSIBLE CYTIDINE/DEOXYCYTIDYLATE DEAMINASE |
| M. ulcerans Agy99 | MUL_4370 | - | 4e-69 | 82.12% (151) | cytidine/deoxycytidylate deaminase |
| M. vanbaalenii PYR-1 | Mvan_5594 | - | 2e-64 | 74.53% (161) | CMP/dCMP deaminase, zinc-binding |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_1214|M.gilvum_PYR-GCK -----------------MTDEDLIRAALDAARGAGPRDVPIGAVVFDAEG
Mvan_5594|M.vanbaalenii_PYR-1 MNRQFSSAGEPAIQSKQVTDEELIRAALDAARLAGPRDVPIGAVVFAPDG
MAB_0268|M.abscessus_ATCC_1997 --------------MTFPDDEALIRAALVAAREAGSQDVPIGAVIYAADG
TH_1653|M.thermoresistible__bu -------------MIGSVTDEDMIRAALTAAREAGPRDVPIGAVVFGPDG
MSMEG_6327|M.smegmatis_MC2_155 -----------------MTPESQIRAALEAARTAGPRDVPIGAVVYAADG
MMAR_5295|M.marinum_M ----------------MIADEDLVRAALAAAATAGPRDVPIGAVVISADG
MUL_4370|M.ulcerans_Agy99 ----------------MIADEDLVRAALAAAATAGPRDVPIGAVMISADG
MAV_0324|M.avium_104 ----------------MISDEDLIRSALAVAATAGPRDVPIGAVVVGADG
Mb3778c|M.bovis_AF2122/97 ----------------MTTDEDLIRAALAVAATAGPRDVPVGAVVVGADG
Rv3752c|M.tuberculosis_H37Rv ----------------MTTDEDLIRAALAVAATAGPRDVPVGAVVVGADG
MLBr_02474|M.leprae_Br4923 ---MPSAAGRRHQTRSVTTDEDLIRAALTVATTAGSRDVPIGAVVLGADG
* :*:** .* **.:***:***: .:*
Mflv_1214|M.gilvum_PYR-GCK TELARAANAREELGDPTAHAEILALRAAALVHGDGWRLEGATLAVTVEPC
Mvan_5594|M.vanbaalenii_PYR-1 RELARAANAREEFGDPTAHAEILALRAAARELGDGWRLEGATLAVTVEPC
MAB_0268|M.abscessus_ATCC_1997 TELARAANARERLGDPTAHAEVLALRAAAAKHGDGWRLEGATLAVTVEPC
TH_1653|M.thermoresistible__bu GELARAANAREQLGDPTAHAEVLALRAAARRLGDGWRLEGATLAVTVEPC
MSMEG_6327|M.smegmatis_MC2_155 TELARAVNVREAYGDPAGHAEIVAMRAAAKVLGDGWRLEGATLAVTVEPC
MMAR_5295|M.marinum_M TELARAVNAREELGDPTAHAEILALRAAARVLGDGWRLEGATLAVTVEPC
MUL_4370|M.ulcerans_Agy99 TELARAVNAREELGDPTAHAEILALRAAARVLGDGWRLEGATLAVTVEPC
MAV_0324|M.avium_104 TELARAVNAREALGDPTAHAEILALRAAAAALGDGWRLEGATLAVTVEPC
Mb3778c|M.bovis_AF2122/97 TELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTVEPC
Rv3752c|M.tuberculosis_H37Rv TELARAVNAREALGDPTAHAEILAMRLAAGVLGDGWRLEGTTLAVTVEPC
MLBr_02474|M.leprae_Br4923 NELARAVNAREAIGDPTAHAEILAMRAAAGTLGNGWRLEGTTLAVTVEPC
*****.*.** ***:.***::*:* ** *:******:*********
Mflv_1214|M.gilvum_PYR-GCK TMCAGALVMARVARVVFGAWEPKTGAVGSLWDVVRDRRLTHRPQVRGGVL
Mvan_5594|M.vanbaalenii_PYR-1 TMCAGALVMARVARVVFGAWEPKTGAVGSLWDVVRDRRLTHRPQVRGGVL
MAB_0268|M.abscessus_ATCC_1997 TMCAGALVLARVGRVVFGAWEPKTGAVGSLWDVVRDRRQAHRPEVRGGVL
TH_1653|M.thermoresistible__bu TMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVL
MSMEG_6327|M.smegmatis_MC2_155 TMCAGALVLARVSRLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVIGGVL
MMAR_5295|M.marinum_M TMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPQVRGGVL
MUL_4370|M.ulcerans_Agy99 TMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPQVRGGVL
MAV_0324|M.avium_104 TMCAGALVLARIARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVL
Mb3778c|M.bovis_AF2122/97 TMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVL
Rv3752c|M.tuberculosis_H37Rv TMCAGALVLARVARLVFGAWEPKTGAVGSLWDVVRDRRLNHRPEVRGGVL
MLBr_02474|M.leprae_Br4923 TMCAGALVLARIERLVFGAWQPKTGAVGSLWDVVRDHRLNHRPAVRGGVL
********:**: *:*****:***************:* *** * ****
Mflv_1214|M.gilvum_PYR-GCK EAECAAPLEEFFARQR---------
Mvan_5594|M.vanbaalenii_PYR-1 EAECAAPLEEFFAGQR---------
MAB_0268|M.abscessus_ATCC_1997 EHECAALLERFFAAKR---------
TH_1653|M.thermoresistible__bu AAECAAPLEEFFARQRDPDSPRGLG
MSMEG_6327|M.smegmatis_MC2_155 ADECAALLEEFFARQR---------
MMAR_5295|M.marinum_M AQECAAPLEEFFGRQRLG-------
MUL_4370|M.ulcerans_Agy99 AQECAAPLEEFFGRQRLG-------
MAV_0324|M.avium_104 ERECAALLEGFFARQRLG-------
Mb3778c|M.bovis_AF2122/97 ARECAAPLEAFFARQRLG-------
Rv3752c|M.tuberculosis_H37Rv ARECAAPLEAFFARQRLG-------
MLBr_02474|M.leprae_Br4923 AQECTAPLEAFFAHQRLSKGPPVR-
**:* ** **. :*