For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_4518 | - | - | 100% (141) | - |
| M. thermoresistible (build 8) | TH_3582 | - | 2e-22 | 41.67% (132) | PUTATIVE protein of unknown function DUF35 |
| M. thermoresistible (build 8) | TH_4228 | - | 2e-13 | 36.50% (137) | PUTATIVE putative protein of unknown function DUF35 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3572c | - | 1e-09 | 36.11% (108) | hypothetical protein Mb3572c |
| M. gilvum PYR-GCK | Mflv_2483 | - | 2e-22 | 41.22% (131) | hypothetical protein Mflv_2483 |
| M. tuberculosis H37Rv | Rv3542c | - | 1e-09 | 36.11% (108) | hypothetical protein Rv3542c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2052 | - | 8e-11 | 33.87% (124) | hypothetical protein MAB_2052 |
| M. marinum M | MMAR_4731 | - | 1e-23 | 42.14% (140) | 3-ketoacyl-CoA thiolase |
| M. avium 104 | MAV_0919 | - | 4e-24 | 43.70% (135) | hypothetical protein MAV_0919 |
| M. smegmatis MC2 155 | MSMEG_4814 | - | 1e-25 | 43.70% (135) | hypothetical protein MSMEG_4814 |
| M. ulcerans Agy99 | MUL_3408 | - | 8e-18 | 40.74% (108) | hypothetical protein MUL_3408 |
| M. vanbaalenii PYR-1 | Mvan_4171 | - | 3e-21 | 39.69% (131) | hypothetical protein Mvan_4171 |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_2483|M.gilvum_PYR-GCK -------MSRL----PLPLLTFDNEFFWTSGADGVLRIQECGDCKSLIHP
Mvan_4171|M.vanbaalenii_PYR-1 -------MSRL----PLPQLTFDNEFFWKSGADGVLRIQECGDCKALIHP
MMAR_4731|M.marinum_M -------MSAAP-GRPLPLITDENEFFWTSGADGKLRLQECAACASLIHP
MAV_0919|M.avium_104 -------MSAS--GRPLPLVTEENEFFWTSGADGKLRLQECRSCASLIHP
MSMEG_4814|M.smegmatis_MC2_155 -------MSQIP-GRPLPTVTALNEYFWTAGRDGVLRIQECRSCDALIHP
MUL_3408|M.ulcerans_Agy99 -------MSVS----AEPIFS--------------LLIEHCDTCARWVHP
TH_4518|M.thermoresistible__bu -------MSAATDQRPVPLLTELNRPYWTGGAAGTWQLQRCDDCERLVHP
Mb3572c|M.bovis_AF2122/97 ------MTGVSDIQEAVAQIKAAGPSKPRLARDPVNQPMINNWVEAIGDR
Rv3542c|M.tuberculosis_H37Rv ------MTGVSDIQEAVAQIKAAGPSKPRLARDPVNQPMINNWVEAIGDR
MAB_2052|M.abscessus_ATCC_1997 MTAASSSLDGLHDPEALPPLTDVNRPYFAAAARGVLVFQRCANGHPFLYP
. . . ..
Mflv_2483|M.gilvum_PYR-GCK PQPVCRYCHSHNMGPREVSGRAVLSAFTVNHRFSIPGLE--APYVVAQVA
Mvan_4171|M.vanbaalenii_PYR-1 PQPVCRYCHSHNMGPREVSGRAVLSAFTVNHRFSIPGLQ--APYVVAQVA
MMAR_4731|M.marinum_M PAPVCRYCRSRDMGVRTVSGAATLTGFTVNHRFSLPGLP--APYVIAQVA
MAV_0919|M.avium_104 PAPVCRYCRSRDIGVRAVSGKATLAGFTVNHRFSLPGMP--APYVIAQVA
MSMEG_4814|M.smegmatis_MC2_155 PQPICRYCRSHDLGVRDVSGRATLAGFTVNERFGFPDMP--PPYVVAEVA
MUL_3408|M.ulcerans_Agy99 ATGRCDDCDA-ALVPRPVSGRGTVFTYTVNHHRYHPDIP--TPYIIALVE
TH_4518|M.thermoresistible__bu PALRCPHDHG-VLRYVALRGRATVETWTVNEHPFFPGFP--PPYVVAFVN
Mb3572c|M.bovis_AF2122/97 NPIYVDDAAARAAGHPGIVAPPAMIQVWTMMGLGGVRPK--DDPLGPIIK
Rv3542c|M.tuberculosis_H37Rv NPIYVDDAAARAAGHPGIVAPPAMIQVWTMMGLGGVRPK--DDPLGPIIK
MAB_2052|M.abscessus_ATCC_1997 -RLVCPVCHDGELAWETAAGTGEIVSFAPVYRPPWDSFPRSEPYVVVLVR
. : : :
Mflv_2483|M.gilvum_PYR-GCK IEEDPRVR--LTTNIVDCDPDELELGRVVEVVFEQNEDVWLPLFRPTAEP
Mvan_4171|M.vanbaalenii_PYR-1 IEEDPRVR--LTTNIIDCDPDELELGRVVEVVFEENDDVWLPLFRPTAET
MMAR_4731|M.marinum_M IAEDPRVR--LTTNIVECDPDRLELGQTVEVVFERIEDVWLPLFRPRTDA
MAV_0919|M.avium_104 IAEDPRVR--LTTNIVECDPDRLELGQAVEVVFEQADDVWFPLFRPSAVG
MSMEG_4814|M.smegmatis_MC2_155 IVEDPRVR--LTTNIVDCDPQSLELGQPVEVSFQHIDDVWLPVFTPSADT
MUL_3408|M.ulcerans_Agy99 LSEQAGLR--VAANIVDCEPDSVTCG------------------------
TH_4518|M.thermoresistible__bu PVEDERVR--VLTNLVNVRPEEVTAKMPVRVTFER---------------
Mb3572c|M.bovis_AF2122/97 LFDDAGYIGVVATNCEQTYHRYLLPGEQVSISAELG--------------
Rv3542c|M.tuberculosis_H37Rv LFDDAGYIGVVATNCEQTYHRYLLPGEQVSISAELG--------------
MAB_2052|M.abscessus_ATCC_1997 LDEGPQLL----ASLEGVAPDEVAIGARVRAVFER---------------
: :. :
Mflv_2483|M.gilvum_PYR-GCK ETAALPDDEIAPQEFPKFVRPMLTTEKFEDAAAITGIGASKMGRRLMVSP
Mvan_4171|M.vanbaalenii_PYR-1 ETAPLPEDEIAPQDFGKFVRPMLTTEKFEDAAAITGIGASRMGRRLMVSP
MMAR_4731|M.marinum_M QPRPLPVDEIAPQRFGEHVRPMLTTQKFEDKVALTGIGMSTIGRRLMVAP
MAV_0919|M.avium_104 EPGPLPADEIAPERFGDHVRPMLTTAKFEDKVALTGIGMSPIGRRLMQLP
MSMEG_4814|M.smegmatis_MC2_155 TPTPAPVEDIAPQDIGKFVRPMLTEDKFEDHSAITGIGMSRIGRRLMVPP
MUL_3408|M.ulcerans_Agy99 ----MPVT------------------------------------------
TH_4518|M.thermoresistible__bu --------------------------------------------------
Mb3572c|M.bovis_AF2122/97 --------------------------------------------------
Rv3542c|M.tuberculosis_H37Rv --------------------------------------------------
MAB_2052|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_2483|M.gilvum_PYR-GCK LSLTVEACEKAIADAGLTLADIDGLSTYP-AMDAMGMGEGGCTVLEGALG
Mvan_4171|M.vanbaalenii_PYR-1 LSLTVEACEAAIADAGLTLADIDGLSTYP-AMDAMGMGEGGVTALEGALG
MMAR_4731|M.marinum_M LSLTVDACEAAVADAGLTFDDIDGLSTYPGGGNLGGFGEGGVTALEAALG
MAV_0919|M.avium_104 LALTVQACEAAIADAGLTYADIDGLSTYPGAINVAGMGEGGVTALEAALG
MSMEG_4814|M.smegmatis_MC2_155 LSLTIEAAEQAVADAGLTFDDIDGLSTYP-GLDIAGMGEGGVSVLEGALG
MUL_3408|M.ulcerans_Agy99 --------------------------------------------------
TH_4518|M.thermoresistible__bu --------------------------------------------------
Mb3572c|M.bovis_AF2122/97 ------------------------------------------------DV
Rv3542c|M.tuberculosis_H37Rv ------------------------------------------------DV
MAB_2052|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_2483|M.gilvum_PYR-GCK IRPTWINGGMDTFGPGGSLIAAVMAVATGMARHVLCFRTLWEATFNQLMK
Mvan_4171|M.vanbaalenii_PYR-1 IRPTWINGGMDTFGPGGSVIAAVMAVATGMARHVLCFRTLWEATFNQLMK
MMAR_4731|M.marinum_M IRPVWHNGGIETFGPGGSVIAAMLAVAGGLARHVLCFRTLWEATYNELMK
MAV_0919|M.avium_104 IRPTWHNGAMETFGPGGSVIAAMLAVAGGLARHVLCFRTLWEATHTELMK
MSMEG_4814|M.smegmatis_MC2_155 LRPTWINGGMDTFGPGGSVIAAMMAISAGLARHVLCFRTLWEATFGQLVK
MUL_3408|M.ulcerans_Agy99 IRPERGTGGAPLFAPAGR--------------------------------
TH_4518|M.thermoresistible__bu ----YTDGDDEVYVP------------------------LFEPDL-----
Mb3572c|M.bovis_AF2122/97 VGPKQTALGEGWFINQHIVWQVGDEDVAEMNWRILKFKPAGSPSS-----
Rv3542c|M.tuberculosis_H37Rv VGPKQTALGEGWFINQHIVWQVGDEDVAEMNWRILKFKPAGSPSS-----
MAB_2052|M.abscessus_ATCC_1997 ---VNEDLGLVRFRPAAS--------------------------------
:
Mflv_2483|M.gilvum_PYR-GCK EGKASPPGGARVNSWQAPFGATSAAHTLALNAQRHFHRYGTTKETLGWIA
Mvan_4171|M.vanbaalenii_PYR-1 EGRVSPPGGTRVNSWQAPFGATSAAHTLALNAQRHFHRYGTTKETLGWIA
MMAR_4731|M.marinum_M RGKIAPPGG-RTTSWQYPFGATSAAHTLAINAQRHFHRYGTTKETLGWIA
MAV_0919|M.avium_104 QGKITPSMG-RMQGWQMPFGATSAAHTLAMNAQRHFHRYGTTKETLGWIA
MSMEG_4814|M.smegmatis_MC2_155 EGKMSPPMSARTNSWQQPYGATSAAHTLAQNAGRHFHRYGTTRETLGWIA
MUL_3408|M.ulcerans_Agy99 --------------------------------------------------
TH_4518|M.thermoresistible__bu --------------------------------------------------
Mb3572c|M.bovis_AF2122/97 ---------------VPDDLDPDAMMRPSSSRDTAFFWDGVKAHELRIQR
Rv3542c|M.tuberculosis_H37Rv ---------------VPDDLDPDAMMRPSSSRDTAFFWDGVKAHELRIQR
MAB_2052|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_2483|M.gilvum_PYR-GCK LNQRANAALNPTAIYRDPMTMQDYLNARPITTPFGLYDCDVPCDGAVAVI
Mvan_4171|M.vanbaalenii_PYR-1 LNQRANAALNPTAIYRDPMTMDDYLNARPITTPFGLYDCDVPCDGAVAVV
MMAR_4731|M.marinum_M LNQRANAELNPTAVYRSPMTMDDYLNARPITTPFGLFDCDVPCDAAIAVI
MAV_0919|M.avium_104 LNQRANAELNPTAIYRSPMTMEDYLGARPITTPFGLYDCDVPCDGAIAVI
MSMEG_4814|M.smegmatis_MC2_155 LNQRANAALNPTAIYREPLTMEDYLSARTITTPFGLYDCDVPCDGAVAVI
MUL_3408|M.ulcerans_Agy99 --------------------------------------------------
TH_4518|M.thermoresistible__bu --------------------------------------------------
Mb3572c|M.bovis_AF2122/97 LADGSLRHPPVPAVWQDKSVPINYVVSSGRGTVFSFVVHHAP--KVPGRT
Rv3542c|M.tuberculosis_H37Rv LADGSLRHPPVPAVWQDKSVPINYVVSSGRGTVFSFVVHHAP--KVPGRT
MAB_2052|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_2483|M.gilvum_PYR-GCK VSAVDAAADAPKPPVFFEAVGTQIIERTDWDQTTLTHEPQVLGQAAHLWT
Mvan_4171|M.vanbaalenii_PYR-1 VSAVDAAVDLPKPPVYFEAVGTQIIERTDWDQTTLTHEPQVLGQAAHLWT
MMAR_4731|M.marinum_M VSAVDAARDLAKPPVLVEAVGTQIIERIDWDQSTLTHEPQVLGQAAHVWT
MAV_0919|M.avium_104 VSAVDAARDLAKPPVLVEAVGTQIIERTDWDQSTLTHEPQVLGQAAHVWT
MSMEG_4814|M.smegmatis_MC2_155 VSAVDAARDLPRPPIRFEAVGTQIIERLDWDQTTLTHEPQVLGQSAHMWS
MUL_3408|M.ulcerans_Agy99 --------------------------------------------------
TH_4518|M.thermoresistible__bu --------------------------------------------------
Mb3572c|M.bovis_AF2122/97 VPFVIALVELEEGVRMLGELRGADPARVAIGMPVRATYIDFPDWSLYAWE
Rv3542c|M.tuberculosis_H37Rv VPFVIALVELEEGVRMLGELRGADPARVAIGMPVRATYIDFPDWSLYAWE
MAB_2052|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_2483|M.gilvum_PYR-GCK RTSLRPDDVDVAELYDGFTFNCLSWLEALGFCGIGESKDFLDGGHAIARD
Mvan_4171|M.vanbaalenii_PYR-1 RTSLRPADVDVAELYDGFTFNCLSWLEALGFCGIGEAKDFLDGGKAIARD
MMAR_4731|M.marinum_M RTTLRPADVDVAELYDGFTMNCLSWIEALGFCGIGEAKEFLDGGKNIARD
MAV_0919|M.avium_104 RTSLRPSDVDVAELYDGFSFNCLSWIEALGFCGIGEAKEFLDGGKNIARD
MSMEG_4814|M.smegmatis_MC2_155 RTSLRPSDVDVAELYDGFTFNCLSWLEGLGFCGIGEAKDFLDGGRNIARD
MUL_3408|M.ulcerans_Agy99 --------------------------------------------------
TH_4518|M.thermoresistible__bu --------------------------------------------------
Mb3572c|M.bovis_AF2122/97 PDE-----------------------------------------------
Rv3542c|M.tuberculosis_H37Rv PDE-----------------------------------------------
MAB_2052|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_2483|M.gilvum_PYR-GCK GVIPLNTHGGQLSHGRTHGMGLVHEAVSQLRGEAGERQVADARVAVVSSG
Mvan_4171|M.vanbaalenii_PYR-1 GVIPLNTHGGQLSHGRTHGMGLIHEAVSQLRGEAGERQVDGARVAVVSSG
MMAR_4731|M.marinum_M GLIPLNTHGGQLSHGRTHGMGLLHEAVTQLRGEADARQVAGARVGVVSSG
MAV_0919|M.avium_104 GQLPLNTHGGQLSHGRTHGMGLLHEAITQLRGEAGDRQVADARVGVVSSG
MSMEG_4814|M.smegmatis_MC2_155 GIIPLNTHGGQLSHGRTHGMGLIHEAVTQLRGEAGERQVEDARVAVASSG
MUL_3408|M.ulcerans_Agy99 --------------------------------------------------
TH_4518|M.thermoresistible__bu --------------------------------------------------
Mb3572c|M.bovis_AF2122/97 --------------------------------------------------
Rv3542c|M.tuberculosis_H37Rv --------------------------------------------------
MAB_2052|M.abscessus_ATCC_1997 --------------------------------------------------
Mflv_2483|M.gilvum_PYR-GCK GLTPSGVMLLRTGA
Mvan_4171|M.vanbaalenii_PYR-1 GLTPSGALLLRTAT
MMAR_4731|M.marinum_M GLTPSGVILLRADT
MAV_0919|M.avium_104 GLTPSGVILLRADR
MSMEG_4814|M.smegmatis_MC2_155 GLTPSGVLLLRRDD
MUL_3408|M.ulcerans_Agy99 --------------
TH_4518|M.thermoresistible__bu --------------
Mb3572c|M.bovis_AF2122/97 --------------
Rv3542c|M.tuberculosis_H37Rv --------------
MAB_2052|M.abscessus_ATCC_1997 --------------