For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3884 | - | - | 100% (386) | acyl-CoA dehydrogenase protein |
| M. thermoresistible (build 8) | TH_4597 | - | 0.0 | 81.43% (377) | PUTATIVE acyl-CoA dehydrogenase protein |
| M. thermoresistible (build 8) | TH_4247 | - | 2e-89 | 46.58% (380) | PUTATIVE putative putative acyl-CoA dehydrogenase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3590c | fadE30 | 4e-73 | 42.34% (385) | acyl-CoA dehydrogenase FADE30 |
| M. gilvum PYR-GCK | Mflv_1481 | - | 1e-67 | 40.36% (389) | acyl-CoA dehydrogenase domain-containing protein |
| M. tuberculosis H37Rv | Rv3560c | fadE30 | 5e-73 | 42.34% (385) | acyl-CoA dehydrogenase FADE30 |
| M. leprae Br4923 | MLBr_00737 | fadE25 | 3e-25 | 33.82% (207) | putative acyl-CoA dehydrogenase |
| M. abscessus ATCC 19977 | MAB_0597 | - | 1e-71 | 41.18% (391) | acyl-CoA dehydrogenase FadE |
| M. marinum M | MMAR_5049 | fadE30 | 3e-70 | 41.71% (386) | acyl-CoA dehydrogenase FadE30 |
| M. avium 104 | MAV_1835 | - | 1e-171 | 76.36% (385) | acyl-CoA dehydrogenase protein |
| M. smegmatis MC2 155 | MSMEG_6012 | - | 1e-68 | 41.16% (396) | putative acyl-CoA dehydrogenase |
| M. ulcerans Agy99 | MUL_4125 | fadE30 | 1e-69 | 41.45% (386) | acyl-CoA dehydrogenase FadE30 |
| M. vanbaalenii PYR-1 | Mvan_5285 | - | 8e-68 | 40.77% (390) | acyl-CoA dehydrogenase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment
TH_3884|M.thermoresistible__bu -------VVTTSDVAEDI--EELRAQFREFLAN--APKPQGLRNYG-PTP
MAV_1835|M.avium_104 -------MPVASERTEDT--AALRSRIQTFLEN--APKPAGLRNYG-PTP
Mflv_1481|M.gilvum_PYR-GCK --------------MIEV--QKFRAEVRDWLAENLVGDFAALKGLGGPGR
Mvan_5285|M.vanbaalenii_PYR-1 --------------MIEV--QEFRAEVRDWLAENLVGEYAALKGLGGPGR
MSMEG_6012|M.smegmatis_MC2_155 --------------MIEV--QEFRAEVRQWLADNLVGDFAALKGLGGPGR
Mb3590c|M.bovis_AF2122/97 --------------MQDV--EEFRAQVRGWLADNLAGEFAALKGLGGPGR
Rv3560c|M.tuberculosis_H37Rv --------------MQDV--EEFRAQVRGWLADNLAGEFAALKGLGGPGR
MMAR_5049|M.marinum_M --------------MQDV--EEFRAEVRGWLAANLVGEFATLKGLGGPGR
MUL_4125|M.ulcerans_Agy99 --------------MQDV--EEFRAEVRGWLAANLVGEFATLKGLGGPGR
MAB_0597|M.abscessus_ATCC_1997 MVESQVSPAPAGEPMSEMSDDQVRTEIREWLAENLVGEFAELKGLGGPGS
MLBr_00737|M.leprae_Br4923 ------MVGWSGNPLFDL--FKLPEEHNELRATIRALAEKEIAPHAADVD
: . . . . : .
TH_3884|M.thermoresistible__bu TADDIAPGRAWHKFLAANGYVCLHWPVRHGGADASVAFQATFAEECARAA
MAV_1835|M.avium_104 TAADVEPGRTWHKYLAEHGYVCLHWPVEYGGADASVAFQAIFAEECARAG
Mflv_1481|M.gilvum_PYR-GCK EHEAFEERLAWNQHLAAAGLTCLGWPEEHGGRGLSVAHRVAFYEEYAKAN
Mvan_5285|M.vanbaalenii_PYR-1 EHEAFEERLAWNRHLAAAGLTCLGWPEEHGGRGLSVAHRVAFYEEYAKAN
MSMEG_6012|M.smegmatis_MC2_155 EHEAFEERRAWNQHLAAAGLTCLGWPVEHGGRGLSVAHRVAFYEEYARAN
Mb3590c|M.bovis_AF2122/97 EHEAFEERRAWNQRLAAAGLTCLGWPEEHGGRGLSTAHRVAFYEEYARAD
Rv3560c|M.tuberculosis_H37Rv EHEAFEERRAWNQRLAAAGLTCLGWPEEHGGRGLSTAHRVAFYEEYARAD
MMAR_5049|M.marinum_M EHEAFEERRAWNQHLAAAGLTCLGWPVEHGGRGLSTAHRVAFYEEYARAD
MUL_4125|M.ulcerans_Agy99 EHEAFEERRAWNQHLAAAGLTCLGWPVEHGGRGLSTAHRVAFYEEYARAD
MAB_0597|M.abscessus_ATCC_1997 EHEAFEERLAWNRHLAAAGWTCLGWPVEHGGRGATVSQRVIFYEEYARAE
MLBr_00737|M.leprae_Br4923 QRARFP--EEALAALNASGFNAIHVPEEYGGQGADSVAACIVIEEVARVD
. * * .: * .:** . . ** *:.
TH_3884|M.thermoresistible__bu VPRQLAITAIDLVGPVLIEFGTEEQKARYLEPIRLGDDIWTQLFSEPDAG
MAV_1835|M.avium_104 VPRQLGITAIDLVGPVLIKFGTDEQKARYLEPIRLGDDIWTQLFSEPGAG
Mflv_1481|M.gilvum_PYR-GCK APDKVNHLGEELLGPTLIAYGTPEQQQRFLPRILDVTELWSQGYSEPGAG
Mvan_5285|M.vanbaalenii_PYR-1 APDKVNHLGEELLGPTLIAYGTPEQQQRFLPKILDVTELWSQGYSEPGAG
MSMEG_6012|M.smegmatis_MC2_155 APDKVNHFGEELLGPTLIEYGTPEQQKRFLPKILDVTELWCQGYSEPNAG
Mb3590c|M.bovis_AF2122/97 APDKVNHFGEELLGPTLIAFGTPQQQRRFLPRIRDVTELWCQGYSEPGAG
Rv3560c|M.tuberculosis_H37Rv APDKVNHFGEELLGPTLIAFGTPQQQRRFLPRIRDVTELWCQGYSEPGAG
MMAR_5049|M.marinum_M APDKVNHFGEELLGPTLIAFGTPEQQQRFLPRILDVTELWCQGYSEPGAG
MUL_4125|M.ulcerans_Agy99 APDKVNHFGEELLGPTLIAFGTPEQQQRFLPRILDVTELWCQGYSEPGAG
MAB_0597|M.abscessus_ATCC_1997 APHKVNHLGEELLGPTLIAYGTPEQQQRFLPAIRDVTELWCQGYSEPGAG
MLBr_00737|M.leprae_Br4923 ASASLIPAVNKLGTMGLILRGSEELKKQVLPSLAAEGAMASYALSEREAG
.. .: .* ** *: : : : * : : ** **
TH_3884|M.thermoresistible__bu SDLAGIRTKAEKT----------ISGWRINGQKVWSSGANSAKFGLLLAR
MAV_1835|M.avium_104 SDLASVRTKAEKT----------ETGWRINGQKVWSSAAKSAKYGLLLAR
Mflv_1481|M.gilvum_PYR-GCK SDLANVSTTATLD----------GDEWVINGQKVWTSLAHWAQWCFVVAR
Mvan_5285|M.vanbaalenii_PYR-1 SDLANVSTTAVLDE--------EGRQWHINGQKVWTSLAHWAQWCFVVAR
MSMEG_6012|M.smegmatis_MC2_155 SDLANVSTTAELVGDAEASGATGNQYWVINGQKVWTSLAHWAQWCFVVAR
Mb3590c|M.bovis_AF2122/97 SDLASVATTAELD----------GDQWVINGQKVWTSLAHLSQWCFVLAR
Rv3560c|M.tuberculosis_H37Rv SDLASVATTAELD----------GDQWVINGQKVWTSLAHLSQWCFVLAR
MMAR_5049|M.marinum_M SDLANVATTAELD----------GDQWVINGQKVWTSLAHLSQWCFVVAR
MUL_4125|M.ulcerans_Agy99 SDLANVATTAELD----------GDQWVINGQKVWTSLAHLSQWCFVVAR
MAB_0597|M.abscessus_ATCC_1997 SDLANVSTSAVLD----------GGDWVINGQKVWTSLALQSQWCFVVAR
MLBr_00737|M.leprae_Br4923 SDAASMRTRAKAD----------GDDWILNGFKCWITNGGKSTWYTVMAV
** *.: * * * :** * * : . : : ::*
TH_3884|M.thermoresistible__bu T--GPESHGGLSMFVVPMDAEGVSVRPLQQMDGE--SKFNEVFLDNVDLP
MAV_1835|M.avium_104 T--GPHKHRDLSVFVLPMDTPGVSVRPLTQMDGE--SKFNEVFFDGVEIR
Mflv_1481|M.gilvum_PYR-GCK TEKGSKRHAGLSYLLVPLQQPGVEIRPIIQLTGD--SEFNEVFFDDARTA
Mvan_5285|M.vanbaalenii_PYR-1 TEKGSKRHAGLSYLLVPLQQPGVEIRPIIQLTGD--SEFNEVFFDDARTD
MSMEG_6012|M.smegmatis_MC2_155 TEKGSKRHAGLSYLLVPLDQPGVEIRPINQLTGD--SEFNEVFFDDARTE
Mb3590c|M.bovis_AF2122/97 TEKGSQRHAGLSYLLVPLDQPGVQIRPIVQITGT--AEFNEVFFDDARTD
Rv3560c|M.tuberculosis_H37Rv TEKGSQRHAGLSYLLVPLDQPGVQIRPIVQITGT--AEFNEVFFDDARTD
MMAR_5049|M.marinum_M TEKGSKRHAGLSYLLVPLDQPGVQIRPIVQITGT--AEFNEVFFDDARTD
MUL_4125|M.ulcerans_Agy99 TEKGSKRHAGLSYLLVPLDQPSVQIRPIVQITGT--AEFNEVFFDDARTD
MAB_0597|M.abscessus_ATCC_1997 TEPGSSRHKGLSYLLVPLDQPGVEIRPIIQLTGT--SEFNEVFFDNARTS
MLBr_00737|M.leprae_Br4923 TDPDKGANG-ISAFIVHKDDEGFSIGPKEKKLGIKGSPTTELYFDKCRIP
* . : :* ::: : ...: * : * : .*:::*
TH_3884|M.thermoresistible__bu ADALIGEPGQGWRIAMVTLGRER--LTLGSHAVVMFELHHRLVQAARARD
MAV_1835|M.avium_104 DDALIGEVGQGWTIAIMTLGRER--LTLGSQAVAMFRLHERMVEAAREHD
Mflv_1481|M.gilvum_PYR-GCK ADLVVGEPGDGWRVAMGTLTFERGVSTLGQQIRYAREHSNLVELAEKTGA
Mvan_5285|M.vanbaalenii_PYR-1 ADLVVGEPGDGWRVAMGTLTFERGVSTLGQQIRYAREHSNLVELAKRTGA
MSMEG_6012|M.smegmatis_MC2_155 AGLVVGQPGDGWRVAMGTLTFERGVSTLGQQIRYAREHSNLVELAKRTGA
Mb3590c|M.bovis_AF2122/97 ADLVVGAPGDGWRVAMATLTFERGVSTLGQQIVYARELSNLVELARRTAA
Rv3560c|M.tuberculosis_H37Rv ADLVVGAPGDGWRVAMATLTFERGVSTLGQQIVYARELSNLVELARRTAA
MMAR_5049|M.marinum_M ADLVVGAPGDGWRVAMGTLTFERGVSTLGQQIVYARELSDLAALARRTGA
MUL_4125|M.ulcerans_Agy99 ADLVVGAPGDGWRVAMGTLTFERGVSTLGQQIVYARELSDLAALARRTGA
MAB_0597|M.abscessus_ATCC_1997 ADLVVGEPGDGWRVAMGTLTFERGVSTLGNQITYARELSRLAELAKSNGA
MLBr_00737|M.leprae_Br4923 GDRIIGEPGTGFKTALATLDHTRPTIGAQAVGIAQGALDAAIVYTKDRKQ
. ::* * *: *: ** * :
TH_3884|M.thermoresistible__bu ALDPTLMRAMIRLWIRIWLLRYTWQRAID-ESDLQSSA-FSVLKLMTSET
MAV_1835|M.avium_104 LLDPVLARSMTKLWARMWLLRFTWQRAID-SGDTSSAA-FSVLKLMTSET
Mflv_1481|M.gilvum_PYR-GCK ADDPLIRERLVRSWAGLKAMRSYALATMD---VEKPGQ-DNISKLLWANW
Mvan_5285|M.vanbaalenii_PYR-1 ADDPLIRERLTRSWAGLKAMRSYALATMD---VEQPGM-DNVSKLLWANW
MSMEG_6012|M.smegmatis_MC2_155 ADDPLIRERLVQSWTGLQAMRSYALATMD---VEQPGQ-DNVSKLLWANW
Mb3590c|M.bovis_AF2122/97 ADDPLIRERLTRAWTGLRAMRSYALATMEGPAVEQPGQ-DNVSKLLWANW
Rv3560c|M.tuberculosis_H37Rv ADDPLIRERLTRAWTGLRAMRSYALATMEGPAVEQPGQ-DNVSKLLWANW
MMAR_5049|M.marinum_M ADDPFIRERLTRAWTGLRAMRSYALATMD---VEQPGQ-DNVSKLLWANW
MUL_4125|M.ulcerans_Agy99 ADDPFIREHLTRAWTGLRAMRSYALATMD---VEQPGQ-DNVSKLLWANW
MAB_0597|M.abscessus_ATCC_1997 ADDPAIRERLAQAYVGMRTMRAYALATMD---EERPGQ-DNVSKLLWANW
MLBr_00737|M.leprae_Br4923 FGESISTFQSIQFMLADMAMKVEAARLIVYAAAARAERGEPDLGFISAAS
:. : :: : . :: :
TH_3884|M.thermoresistible__bu DRDLGDLATDVLGTDACVDPSG-GSEEAELVRAMLVGRAQTILGGTSEIQ
MAV_1835|M.avium_104 DRDLGDMATEVLGTDACADP---GDE--ELVQHMLVGRAQTILGGTSEIQ
Mflv_1481|M.gilvum_PYR-GCK HRELGEIAMDIEGAAGLTLP---DGEFSEWQRLYLFSRSDTIYGGSNEIQ
Mvan_5285|M.vanbaalenii_PYR-1 HRELGEIAMDVQGMAGLTLP---GGEFDEWQRLYLFSRSDTIYGGSNEIQ
MSMEG_6012|M.smegmatis_MC2_155 HRELGEIAMDVQGMAGLTLE---NGEFDEWQRLYLFSRADTIYGGSNEIQ
Mb3590c|M.bovis_AF2122/97 HRNLGELAMDVIGKPGMTMP---DGEFDEWQRLYLFTRADTIYGGSNEIQ
Rv3560c|M.tuberculosis_H37Rv HRNLGELAMDVIGKPGMTMP---DGEFDEWQRLYLFTRADTIYGGSNEIQ
MMAR_5049|M.marinum_M HRSLGELAMDVIGKPGLTLA---DGEFDEWQRLFLFTRADTIYGGSNEIQ
MUL_4125|M.ulcerans_Agy99 HRSLGELAMDVIGKPGLTLA---DGEFDEWQRLFLFTRADTIYGGSNEIQ
MAB_0597|M.abscessus_ATCC_1997 HRDLGELAMEIIGTSTLLTN---AGEMDEWQRLFLFSRADTIYGGSNEIQ
MLBr_00737|M.leprae_Br4923 KCFASDIAMEVTTDAVQLFGGAGYTSDFPVERFMRDAKITQIYEGTNQIQ
. .::* :: . : : * *:.:**
TH_3884|M.thermoresistible__bu RNILGERVLGLPKEPR-
MAV_1835|M.avium_104 RNILGERVLGLPKEPR-
Mflv_1481|M.gilvum_PYR-GCK RNIIAERVLGLPREARH
Mvan_5285|M.vanbaalenii_PYR-1 RNIIAERVLGLPREAKG
MSMEG_6012|M.smegmatis_MC2_155 RNIIAERVLGLPREVKG
Mb3590c|M.bovis_AF2122/97 RNIIAERVLGLPREAKG
Rv3560c|M.tuberculosis_H37Rv RNIIAERVLGLPREAKG
MMAR_5049|M.marinum_M RNIIAERVLGLPREAKG
MUL_4125|M.ulcerans_Agy99 RNIIAERVLGLPREAKG
MAB_0597|M.abscessus_ATCC_1997 RNIISERVLGLPREAR-
MLBr_00737|M.leprae_Br4923 RVVMSRALLR-------
* ::.. :*