For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VIEVQKFRAEVRDWLAENLVGDFAALKGLGGPGREHEAFEERLAWNQHLAAAGLTCLGWPEEHGGRGLSV AHRVAFYEEYAKANAPDKVNHLGEELLGPTLIAYGTPEQQQRFLPRILDVTELWSQGYSEPGAGSDLANV STTATLDGDEWVINGQKVWTSLAHWAQWCFVVARTEKGSKRHAGLSYLLVPLQQPGVEIRPIIQLTGDSE FNEVFFDDARTAADLVVGEPGDGWRVAMGTLTFERGVSTLGQQIRYAREHSNLVELAEKTGAADDPLIRE RLVRSWAGLKAMRSYALATMDVEKPGQDNISKLLWANWHRELGEIAMDIEGAAGLTLPDGEFSEWQRLYL FSRSDTIYGGSNEIQRNIIAERVLGLPREARH
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_1481 | - | - | 100% (382) | acyl-CoA dehydrogenase domain-containing protein |
M. gilvum PYR-GCK | Mflv_1479 | - | 2e-68 | 38.48% (382) | acyl-CoA dehydrogenase domain-containing protein |
M. gilvum PYR-GCK | Mflv_1794 | - | 6e-62 | 38.44% (398) | acyl-CoA dehydrogenase domain-containing protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3590c | fadE30 | 0.0 | 83.51% (382) | acyl-CoA dehydrogenase FADE30 |
M. tuberculosis H37Rv | Rv3560c | fadE30 | 0.0 | 83.51% (382) | acyl-CoA dehydrogenase FADE30 |
M. leprae Br4923 | MLBr_00737 | fadE25 | 5e-24 | 27.89% (355) | putative acyl-CoA dehydrogenase |
M. abscessus ATCC 19977 | MAB_0597 | - | 0.0 | 81.02% (374) | acyl-CoA dehydrogenase FadE |
M. marinum M | MMAR_5049 | fadE30 | 0.0 | 85.75% (379) | acyl-CoA dehydrogenase FadE30 |
M. avium 104 | MAV_0601 | - | 0.0 | 85.49% (379) | putative acyl-CoA dehydrogenase |
M. smegmatis MC2 155 | MSMEG_6012 | - | 0.0 | 88.24% (391) | putative acyl-CoA dehydrogenase |
M. thermoresistible (build 8) | TH_4263 | - | 0.0 | 87.66% (381) | PUTATIVE acyl-CoA dehydrogenase domain protein |
M. ulcerans Agy99 | MUL_4125 | fadE30 | 0.0 | 85.22% (379) | acyl-CoA dehydrogenase FadE30 |
M. vanbaalenii PYR-1 | Mvan_5285 | - | 0.0 | 93.73% (383) | acyl-CoA dehydrogenase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb3590c|M.bovis_AF2122/97 --------------MQDV--EEFRAQVRGWLADNLAGEFAALKGLGGPGR Rv3560c|M.tuberculosis_H37Rv --------------MQDV--EEFRAQVRGWLADNLAGEFAALKGLGGPGR MMAR_5049|M.marinum_M --------------MQDV--EEFRAEVRGWLAANLVGEFATLKGLGGPGR MUL_4125|M.ulcerans_Agy99 --------------MQDV--EEFRAEVRGWLAANLVGEFATLKGLGGPGR MAV_0601|M.avium_104 --------------MQDV--EEFRAEVRSWLADNLVGEFAALKGLGGPGR Mflv_1481|M.gilvum_PYR-GCK --------------MIEV--QKFRAEVRDWLAENLVGDFAALKGLGGPGR Mvan_5285|M.vanbaalenii_PYR-1 --------------MIEV--QEFRAEVRDWLAENLVGEYAALKGLGGPGR MSMEG_6012|M.smegmatis_MC2_155 --------------MIEV--QEFRAEVRQWLADNLVGDFAALKGLGGPGR TH_4263|M.thermoresistible__bu --------------VIEV--HEFRAEVRQWLADNLVGEYAALKGLGGPGR MAB_0597|M.abscessus_ATCC_1997 MVESQVSPAPAGEPMSEMSDDQVRTEIREWLAENLVGEFAELKGLGGPGS MLBr_00737|M.leprae_Br4923 ----------MVGWSGNPLFDLFKLPEEHNELRATIRALAEKEIAPHAAD : . .: . * : .. Mb3590c|M.bovis_AF2122/97 EHEAFEERRAWNQRLAAAGLTCLGWPEEHGGRGLSTAHRVAFYEEYARAD Rv3560c|M.tuberculosis_H37Rv EHEAFEERRAWNQRLAAAGLTCLGWPEEHGGRGLSTAHRVAFYEEYARAD MMAR_5049|M.marinum_M EHEAFEERRAWNQHLAAAGLTCLGWPVEHGGRGLSTAHRVAFYEEYARAD MUL_4125|M.ulcerans_Agy99 EHEAFEERRAWNQHLAAAGLTCLGWPVEHGGRGLSTAHRVAFYEEYARAD MAV_0601|M.avium_104 EHEAFEERRAWNQHLAKAGLTCLGWPVEHGGRGLSTAHRVAFYEEYARAD Mflv_1481|M.gilvum_PYR-GCK EHEAFEERLAWNQHLAAAGLTCLGWPEEHGGRGLSVAHRVAFYEEYAKAN Mvan_5285|M.vanbaalenii_PYR-1 EHEAFEERLAWNRHLAAAGLTCLGWPEEHGGRGLSVAHRVAFYEEYAKAN MSMEG_6012|M.smegmatis_MC2_155 EHEAFEERRAWNQHLAAAGLTCLGWPVEHGGRGLSVAHRVAFYEEYARAN TH_4263|M.thermoresistible__bu EHEAFEERLEWNRKLAAAGLTCLGWPVEHGGRGLSVAHRVAFYEEYALAN MAB_0597|M.abscessus_ATCC_1997 EHEAFEERLAWNRHLAAAGWTCLGWPVEHGGRGATVSQRVIFYEEYARAE MLBr_00737|M.leprae_Br4923 VDQRARFPEEALAALNASGFNAIHVPEEYGGQGADSVAACIVIEEVARVD .: . * :* ..: * *:**:* . ** * .: Mb3590c|M.bovis_AF2122/97 APDKVNHFGEELLGPTLIAFGTPQQQRRFLPRIRDVTELWCQGYSEPGAG Rv3560c|M.tuberculosis_H37Rv APDKVNHFGEELLGPTLIAFGTPQQQRRFLPRIRDVTELWCQGYSEPGAG MMAR_5049|M.marinum_M APDKVNHFGEELLGPTLIAFGTPEQQQRFLPRILDVTELWCQGYSEPGAG MUL_4125|M.ulcerans_Agy99 APDKVNHFGEELLGPTLIAFGTPEQQQRFLPRILDVTELWCQGYSEPGAG MAV_0601|M.avium_104 APDKVNHFGEELLGPTLIAFGTPEQQQRFLPRILDVTELWCQGYSEPGAG Mflv_1481|M.gilvum_PYR-GCK APDKVNHLGEELLGPTLIAYGTPEQQQRFLPRILDVTELWSQGYSEPGAG Mvan_5285|M.vanbaalenii_PYR-1 APDKVNHLGEELLGPTLIAYGTPEQQQRFLPKILDVTELWSQGYSEPGAG MSMEG_6012|M.smegmatis_MC2_155 APDKVNHFGEELLGPTLIEYGTPEQQKRFLPKILDVTELWCQGYSEPNAG TH_4263|M.thermoresistible__bu APAKVNHLGEELLGPTLIEYGTPEQQQRFLPRILDVTELWAQGYSEPGAG MAB_0597|M.abscessus_ATCC_1997 APHKVNHLGEELLGPTLIAYGTPEQQQRFLPAIRDVTELWCQGYSEPGAG MLBr_00737|M.leprae_Br4923 ASASLIPAVNKLGTMGLILRGSEELKKQVLPSLAAEGAMASYALSEREAG *. .: ::* ** *: : :::.** : : . . ** ** Mb3590c|M.bovis_AF2122/97 SDLASVATTAELD----------GDQWVINGQKVWTSLAHLSQWCFVLAR Rv3560c|M.tuberculosis_H37Rv SDLASVATTAELD----------GDQWVINGQKVWTSLAHLSQWCFVLAR MMAR_5049|M.marinum_M SDLANVATTAELD----------GDQWVINGQKVWTSLAHLSQWCFVVAR MUL_4125|M.ulcerans_Agy99 SDLANVATTAELD----------GDQWVINGQKVWTSLAHLSQWCFVVAR MAV_0601|M.avium_104 SDLANVSTTAELD----------GDQWVINGQKVWTSLAHLSQWCFVVAR Mflv_1481|M.gilvum_PYR-GCK SDLANVSTTATLD----------GDEWVINGQKVWTSLAHWAQWCFVVAR Mvan_5285|M.vanbaalenii_PYR-1 SDLANVSTTAVLDE--------EGRQWHINGQKVWTSLAHWAQWCFVVAR MSMEG_6012|M.smegmatis_MC2_155 SDLANVSTTAELVGDAEASGATGNQYWVINGQKVWTSLAHWAQWCFVVAR TH_4263|M.thermoresistible__bu SDLANVSTTAVLD----------GDQWVINGQKVWTSLAHWAQWCFVVAR MAB_0597|M.abscessus_ATCC_1997 SDLANVSTSAVLD----------GGDWVINGQKVWTSLALQSQWCFVVAR MLBr_00737|M.leprae_Br4923 SDAASMRTRAKAD----------GDDWILNGFKCWITNGGKSTWYTVMAV ** *.: * * . * :** * * : . : * *:* Mb3590c|M.bovis_AF2122/97 TEKGSQRHAGLSYLLVPLDQPGVQIRPIVQITGT--AEFNEVFFDDARTD Rv3560c|M.tuberculosis_H37Rv TEKGSQRHAGLSYLLVPLDQPGVQIRPIVQITGT--AEFNEVFFDDARTD MMAR_5049|M.marinum_M TEKGSKRHAGLSYLLVPLDQPGVQIRPIVQITGT--AEFNEVFFDDARTD MUL_4125|M.ulcerans_Agy99 TEKGSKRHAGLSYLLVPLDQPSVQIRPIVQITGT--AEFNEVFFDDARTD MAV_0601|M.avium_104 TEKGSKRHAGLSYLLVPLDQPGVQIRPIVQITGT--AEFNEVFFDDARTD Mflv_1481|M.gilvum_PYR-GCK TEKGSKRHAGLSYLLVPLQQPGVEIRPIIQLTGD--SEFNEVFFDDARTA Mvan_5285|M.vanbaalenii_PYR-1 TEKGSKRHAGLSYLLVPLQQPGVEIRPIIQLTGD--SEFNEVFFDDARTD MSMEG_6012|M.smegmatis_MC2_155 TEKGSKRHAGLSYLLVPLDQPGVEIRPINQLTGD--SEFNEVFFDDARTE TH_4263|M.thermoresistible__bu TERGSKRHHGLSYLLVPLDQPGVEIRPIVQLTGD--SEFNEVFFDNARTD MAB_0597|M.abscessus_ATCC_1997 TEPGSSRHKGLSYLLVPLDQPGVEIRPIIQLTGT--SEFNEVFFDNARTS MLBr_00737|M.leprae_Br4923 TDP-DKGANGISAFIVHKDDEGFSIGPKEKKLGIKGSPTTELYFDKCRIP *: .. *:* ::* :: ...* * : * : .*::**..* Mb3590c|M.bovis_AF2122/97 ADLVVGAPGDGWRVAMATLTFER---GVSTLGQQIVYARELSNLVELARR Rv3560c|M.tuberculosis_H37Rv ADLVVGAPGDGWRVAMATLTFER---GVSTLGQQIVYARELSNLVELARR MMAR_5049|M.marinum_M ADLVVGAPGDGWRVAMGTLTFER---GVSTLGQQIVYARELSDLAALARR MUL_4125|M.ulcerans_Agy99 ADLVVGAPGDGWRVAMGTLTFER---GVSTLGQQIVYARELSDLAALARR MAV_0601|M.avium_104 ASMVVGQPGDGWRVAMGTLTFER---GVSTLGQQIRYARELSNLAELARR Mflv_1481|M.gilvum_PYR-GCK ADLVVGEPGDGWRVAMGTLTFER---GVSTLGQQIRYAREHSNLVELAEK Mvan_5285|M.vanbaalenii_PYR-1 ADLVVGEPGDGWRVAMGTLTFER---GVSTLGQQIRYAREHSNLVELAKR MSMEG_6012|M.smegmatis_MC2_155 AGLVVGQPGDGWRVAMGTLTFER---GVSTLGQQIRYAREHSNLVELAKR TH_4263|M.thermoresistible__bu ASMVVGEPGDGWRVAMGTLTFER---GVSTLGQQIQYRRELEGVVELAKR MAB_0597|M.abscessus_ATCC_1997 ADLVVGEPGDGWRVAMGTLTFER---GVSTLGNQITYARELSRLAELAKS MLBr_00737|M.leprae_Br4923 GDRIIGEPGTGFKTALATLDHTRPTIGAQAVGIAQGALDAAIVYTKDRKQ .. ::* ** *::.*:.** . * *..::* . . Mb3590c|M.bovis_AF2122/97 TAAADDPLIRERLTRAWTGLRAMRSYALATMEGPAVEQPGQDNVSKLLWA Rv3560c|M.tuberculosis_H37Rv TAAADDPLIRERLTRAWTGLRAMRSYALATMEGPAVEQPGQDNVSKLLWA MMAR_5049|M.marinum_M TGAADDPFIRERLTRAWTGLRAMRSYALATMD---VEQPGQDNVSKLLWA MUL_4125|M.ulcerans_Agy99 TGAADDPFIREHLTRAWTGLRAMRSYALATMD---VEQPGQDNVSKLLWA MAV_0601|M.avium_104 NGAADDPFIRERLTRAWTGLRAMRSYALATMD---VEQPGQDNVSKLLWA Mflv_1481|M.gilvum_PYR-GCK TGAADDPLIRERLVRSWAGLKAMRSYALATMD---VEKPGQDNISKLLWA Mvan_5285|M.vanbaalenii_PYR-1 TGAADDPLIRERLTRSWAGLKAMRSYALATMD---VEQPGMDNVSKLLWA MSMEG_6012|M.smegmatis_MC2_155 TGAADDPLIRERLVQSWTGLQAMRSYALATMD---VEQPGQDNVSKLLWA TH_4263|M.thermoresistible__bu TGAIDDPLIRERLTRSWVGLRTMRSYALATMD---DERPGQDNISKLLWA MAB_0597|M.abscessus_ATCC_1997 NGAADDPAIRERLAQAYVGMRTMRAYALATMD---EERPGQDNVSKLLWA MLBr_00737|M.leprae_Br4923 FGESISTFQSIQFMLADMAMKVEAARLIVYAAAARAERGEPD--LGFISA . .. :: : .::. : :. *: * :: * Mb3590c|M.bovis_AF2122/97 NWHRNLGELAMDVIGKPGMTMPDGEFD---EWQRLYLFTRADTIYGGSNE Rv3560c|M.tuberculosis_H37Rv NWHRNLGELAMDVIGKPGMTMPDGEFD---EWQRLYLFTRADTIYGGSNE MMAR_5049|M.marinum_M NWHRSLGELAMDVIGKPGLTLADGEFD---EWQRLFLFTRADTIYGGSNE MUL_4125|M.ulcerans_Agy99 NWHRSLGELAMDVIGKPGLTLADGEFD---EWQRLFLFTRADTIYGGSNE MAV_0601|M.avium_104 NWHRALGELAMDVIGKPGMTMPDGEFD---EWQRLFLFTRADTIYGGSNE Mflv_1481|M.gilvum_PYR-GCK NWHRELGEIAMDIEGAAGLTLPDGEFS---EWQRLYLFSRSDTIYGGSNE Mvan_5285|M.vanbaalenii_PYR-1 NWHRELGEIAMDVQGMAGLTLPGGEFD---EWQRLYLFSRSDTIYGGSNE MSMEG_6012|M.smegmatis_MC2_155 NWHRELGEIAMDVQGMAGLTLENGEFD---EWQRLYLFSRADTIYGGSNE TH_4263|M.thermoresistible__bu NWHRELGEIAMDVVGMAGLTLTDGDFD---EWQRLYLFSRSDTIYGGSNE MAB_0597|M.abscessus_ATCC_1997 NWHRDLGELAMEIIGTSTLLTNAGEMD---EWQRLFLFSRADTIYGGSNE MLBr_00737|M.leprae_Br4923 ASKCFASDIAMEVTTDAVQLFGGAGYTSDFPVERFMRDAKITQIYEGTNQ : .::**:: . . :*: :: ** *:*: Mb3590c|M.bovis_AF2122/97 IQRNIIAERVLGLPREAKG Rv3560c|M.tuberculosis_H37Rv IQRNIIAERVLGLPREAKG MMAR_5049|M.marinum_M IQRNIIAERVLGLPREAKG MUL_4125|M.ulcerans_Agy99 IQRNIIAERVLGLPREAKG MAV_0601|M.avium_104 IQRNIIAERVLGLPREVKG Mflv_1481|M.gilvum_PYR-GCK IQRNIIAERVLGLPREARH Mvan_5285|M.vanbaalenii_PYR-1 IQRNIIAERVLGLPREAKG MSMEG_6012|M.smegmatis_MC2_155 IQRNIIAERVLGLPREVKG TH_4263|M.thermoresistible__bu IQRNIIAERVLGLPREPKG MAB_0597|M.abscessus_ATCC_1997 IQRNIISERVLGLPREAR- MLBr_00737|M.leprae_Br4923 IQRVVMSRALLR------- *** :::. :*