For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3751 | - | - | 100% (386) | putative acyl-CoA dehydrogenase |
| M. thermoresistible (build 8) | TH_2616 | - | e-132 | 78.64% (295) | PUTATIVE acyl-CoA dehydrogenase family protein |
| M. thermoresistible (build 8) | TH_3325 | - | 5e-74 | 42.20% (391) | PUTATIVE acyl-CoA dehydrogenase domain protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3590c | fadE30 | 8e-56 | 34.95% (392) | acyl-CoA dehydrogenase FADE30 |
| M. gilvum PYR-GCK | Mflv_2435 | - | 1e-69 | 40.56% (392) | acyl-CoA dehydrogenase domain-containing protein |
| M. tuberculosis H37Rv | Rv3560c | fadE30 | 9e-56 | 34.95% (392) | acyl-CoA dehydrogenase FADE30 |
| M. leprae Br4923 | MLBr_00737 | fadE25 | 2e-24 | 24.93% (377) | putative acyl-CoA dehydrogenase |
| M. abscessus ATCC 19977 | MAB_0597 | - | 3e-58 | 37.43% (342) | acyl-CoA dehydrogenase FadE |
| M. marinum M | MMAR_4748 | - | 1e-71 | 40.78% (385) | acyl-CoA dehydrogenase |
| M. avium 104 | MAV_2563 | - | 1e-165 | 73.51% (385) | putative acyl-CoA dehydrogenase |
| M. smegmatis MC2 155 | MSMEG_4844 | - | 1e-69 | 40.73% (383) | acyl-CoA dehydrogenase |
| M. ulcerans Agy99 | MUL_2892 | fadE17 | 2e-54 | 34.92% (378) | acyl-CoA dehydrogenase FadE17 |
| M. vanbaalenii PYR-1 | Mvan_4217 | - | 4e-73 | 40.92% (391) | acyl-CoA dehydrogenase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3590c|M.bovis_AF2122/97 --------------MQDV--EEFRAQVRGWLADNLAGEFAALKGLGGPGR
Rv3560c|M.tuberculosis_H37Rv --------------MQDV--EEFRAQVRGWLADNLAGEFAALKGLGGPGR
MAB_0597|M.abscessus_ATCC_1997 MVESQVSPAPAGEPMSEMSDDQVRTEIREWLAENLVGEFAELKGLGGPGS
MUL_2892|M.ulcerans_Agy99 ------------------------------MDEHLPCGWSGPGALAVQ--
TH_3751|M.thermoresistible__bu -------------------VSDVAQFRQDLRQYLRRLDYADVWRSAASTT
MAV_2563|M.avium_104 --MSAPVDSALHSGRHLEYLSSIAAYREDFRRYLRDLKTADEWRAAAFTS
Mflv_2435|M.gilvum_PYR-GCK -------------------MTNDLYEPANFRTALRDWLDENDLSPGDDHS
Mvan_4217|M.vanbaalenii_PYR-1 -----------------MTVAVDTSNASEFRSQLKAWLDENDLTPPADHS
MSMEG_4844|M.smegmatis_MC2_155 --------------------MTELHDPTAFRTALQDWLGRTDLTPPEDHS
MMAR_4748|M.marinum_M -------------------MTVDIG---RFRADLRTWLDDNDLTPGPDHS
MLBr_00737|M.leprae_Br4923 --------MVGWSGNPLFDLFKLPEEHNELRATIRALAEKEIAPHAADVD
Mb3590c|M.bovis_AF2122/97 EHEAFEERRAWNQRLAAAGLTCLGWPEEHGGRGLSTAHRVAFYEEYARAD
Rv3560c|M.tuberculosis_H37Rv EHEAFEERRAWNQRLAAAGLTCLGWPEEHGGRGLSTAHRVAFYEEYARAD
MAB_0597|M.abscessus_ATCC_1997 EHEAFEERLAWNRHLAAAGWTCLGWPVEHGGRGATVSQRVIFYEEYARAE
MUL_2892|M.ulcerans_Agy99 DRKAFAAR--WRQLLVAAGLIAVSWPKEYGGGGYSPVEQVVLAEEFARAG
TH_3751|M.thermoresistible__bu AEDGLAHDATVMASLYADGWNRYGWPEEAGGLGGTEIHRAVLYEELGQAM
MAV_2563|M.avium_104 AEDGLAHDATVMASLNADGWNRYGWPEAAGGLGGNEIHRAVYYEELGHAM
Mflv_2435|M.gilvum_PYR-GCK LQGHIRQFARVQRALYDAGWSRYGWPEHAGGLGGPAILRAIVGEEVVGRR
Mvan_4217|M.vanbaalenii_PYR-1 LQGHIRQFARVQRALYDAGWSRYGWPEHAGGLGGPAILRAIVGEEVVGRR
MSMEG_4844|M.smegmatis_MC2_155 LEAHMTQFRRVQRALYDADFGRYGWPETAGGLGGPDVLRAIVGEEIVGRR
MMAR_4748|M.marinum_M LRGHMQQLARVHGALYEAGWMRYGWPTEVGGLGGPALLRAIVGEEVVGRR
MLBr_00737|M.leprae_Br4923 QRARFPEEA--LAALNASGFNAIHVPEEYGGQGADSVAACIVIEEVARVD
. : * . * ** * **
Mb3590c|M.bovis_AF2122/97 APDKVNH--FGEELLGPTLIAFGTPQQQRRFLPRIRDVTELWCQGYSEPG
Rv3560c|M.tuberculosis_H37Rv APDKVNH--FGEELLGPTLIAFGTPQQQRRFLPRIRDVTELWCQGYSEPG
MAB_0597|M.abscessus_ATCC_1997 APHKVNH--LGEELLGPTLIAYGTPEQQQRFLPAIRDVTELWCQGYSEPG
MUL_2892|M.ulcerans_Agy99 APEREENDLFGVDLLCNTLIALGTEAQKRHFLPRILTGDDRWCQGFSEPE
TH_3751|M.thermoresistible__bu LPIPAQA--WTLEVIAPSVLKFAP-HLASRFLPNYLNGSEWWGQGFSEPE
MAV_2563|M.avium_104 LPIPAQH--WTLETLGPALLKFAP-GLAAAYLPGYLSGVEWWGQSFSEPE
Mflv_2435|M.gilvum_PYR-GCK LAEPGPY--SMLEVLAPTMIDYAKPELAAEMVPKLLSGEEQWCQGFSEPG
Mvan_4217|M.vanbaalenii_PYR-1 LAEPGPY--SMLEVLAPTMIDYAPAELAAEMVPKLLSGEEQWCQGFSEPG
MSMEG_4844|M.smegmatis_MC2_155 LAEPGPW--SMLEVLAPTMIDYAHPELAAEMVPKLLRGDEQWCQGFSEPG
MMAR_4748|M.marinum_M LAEPGPY--SMAEVLAPTLIDYAPKGLAADMVPRLLSGREQWCQGFSEPG
MLBr_00737|M.leprae_Br4923 ASASLIP--AVNKLGTMGLILRGSEELKKQVLPSLAAEGAMASYALSERE
. . :: . :* . **
Mb3590c|M.bovis_AF2122/97 AGSDLASVATTAELD----GDQWVINGQKVWTSLAHLSQWCFVLARTE-K
Rv3560c|M.tuberculosis_H37Rv AGSDLASVATTAELD----GDQWVINGQKVWTSLAHLSQWCFVLARTE-K
MAB_0597|M.abscessus_ATCC_1997 AGSDLANVSTSAVLD----GGDWVINGQKVWTSLALQSQWCFVVARTE-P
MUL_2892|M.ulcerans_Agy99 AGSDLASVRTRAVLD----GDQWVINGQKIWTSAGSTANWIFVLARTD-P
TH_3751|M.thermoresistible__bu SGSDLASLRTRATVD---GDG-FVVNGQKIWTSQGATAKRLLVLVRTG-T
MAV_2563|M.avium_104 SGSDLASLRTRAVDD---GAGGFVVNGQKIWTSQGPTATRLLALVRTG-T
Mflv_2435|M.gilvum_PYR-GCK SGSDLASLTTRAVLKPDSGGGTYVINGQKVWTSFAQFSHRCVLLTRTGDA
Mvan_4217|M.vanbaalenii_PYR-1 SGSDLASLTTRAVQD----GDKWIINGQKVWTSFAQYSHRCILLTRTGDA
MSMEG_4844|M.smegmatis_MC2_155 AGSDLASITTRATQK----GDKWIINGQKVWTSFAQFSQRCILLTRTGDA
MMAR_4748|M.marinum_M SGSDLASLSTRATPR----GDDWIINGQKVWTSFAQFCTRCILLTRT---
MLBr_00737|M.leprae_Br4923 AGSDAASMRTRAKAD----GDDWILNGFKCWITNGGKSTWYTVMAVTD--
:*** *.: * * . :::** * * : . . :. *
Mb3590c|M.bovis_AF2122/97 GSQRHAGLSYLLVPLDQPGVQIRPIVQITGT--AEFNEVFFDDARTDADL
Rv3560c|M.tuberculosis_H37Rv GSQRHAGLSYLLVPLDQPGVQIRPIVQITGT--AEFNEVFFDDARTDADL
MAB_0597|M.abscessus_ATCC_1997 GSSRHKGLSYLLVPLDQPGVEIRPIIQLTGT--SEFNEVFFDNARTSADL
MUL_2892|M.ulcerans_Agy99 VAPKHQGLSLLLVPMDQPAVVVRPIVNAAGH--SLFNEVFFADARTGVAN
TH_3751|M.thermoresistible__bu PESRHRGLSMLLIDTDTPGLTVRPIALASGR--RELAEVFFDDVRVPTDR
MAV_2563|M.avium_104 PESRHRGLTMIMVDADAPGVTIRPIALASGR--RELAEVFFDDVRVDGER
Mflv_2435|M.gilvum_PYR-GCK DTPNHQAITAFFVDLDTPGISVRPLRTMHDV--DEFCEVYFDDVEVDASR
Mvan_4217|M.vanbaalenii_PYR-1 DTPNHKAITAFFVDIDTPGVTVRPLRTMHDV--DEFCEVYFDDVAVDSSR
MSMEG_4844|M.smegmatis_MC2_155 GTPNHQAITAFFVDLDTPGITVRPLRTMHDV--DEFCEVYFDDVEVDAGR
MMAR_4748|M.marinum_M -APGHEGITAFFVDLDTPGITVRPLRTMHGV--DEFCEVYYDDVVIPSGR
MLBr_00737|M.leprae_Br4923 PDKGANGISAFIVHKDDEGFSIGPKEKKLGIKGSPTTELYFDKCRIPGDR
.:: ::: * .. : * . *::: .
Mb3590c|M.bovis_AF2122/97 VVGAPGDGWRVAMATLTFERGVSTLGQQIVYARELSNLVELARRTAAADD
Rv3560c|M.tuberculosis_H37Rv VVGAPGDGWRVAMATLTFERGVSTLGQQIVYARELSNLVELARRTAAADD
MAB_0597|M.abscessus_ATCC_1997 VVGEPGDGWRVAMGTLTFERGVSTLGNQITYARELSRLAELAKSNGAADD
MUL_2892|M.ulcerans_Agy99 VVGEVGSGWTAAMSLLGFERGAQATTGAIDFARDLSRLCDLARARGLDSD
TH_3751|M.thermoresistible__bu LIGEVGGGWAVTMFLMQYERGMYGYAALNKSLMELSRVREYMVERAVGQS
MAV_2563|M.avium_104 VVGDVGGGWAVAMHLMQYERGMYGYAVLNKVLTELGRLREHMVTAGATDA
Mflv_2435|M.gilvum_PYR-GCK MLGKPGDGWQLAMDLLPYERSTCFWQRIAYLYSRFDSLVDEVKRQGQSID
Mvan_4217|M.vanbaalenii_PYR-1 MLGQPGDGWQLAMDLLPYERSTCFWQRIAYLYSRFDALVDEVKRQGQSVD
MSMEG_4844|M.smegmatis_MC2_155 MLGNPGQGWQLAMALLPYERSTCFWQRIAYLYSRFDALIEAVKRQGQVVD
MMAR_4748|M.marinum_M MLGRPGDGWRLAMDLLPYERSTCFWQRIAYLYSRLDELITDTAATNSALD
MLBr_00737|M.leprae_Br4923 IIGEPGTGFKTALATLDHTRPTIGAQAVGIAQGALDAAIVYTKDRKQFGE
::* * *: :: : . * :.
Mb3590c|M.bovis_AF2122/97 PLIRERLTRAWTGLRAMR--SYALATMEGPAVEQPGQDNVSKLLWANWHR
Rv3560c|M.tuberculosis_H37Rv PLIRERLTRAWTGLRAMR--SYALATMEGPAVEQPGQDNVSKLLWANWHR
MAB_0597|M.abscessus_ATCC_1997 PAIRERLAQAYVGMRTMR--AYALATMD---EERPGQDNVSKLLWANWHR
MUL_2892|M.ulcerans_Agy99 PRIRDRLAWCYSRTQIMRYRGYCSLTWALNGVLPGAEAAISKVIWSEYFQ
TH_3751|M.thermoresistible__bu AWE--KFARVYVEVITAQARAASNVRRLAAGEAIGPESSIDKLLFSEAER
MAV_2563|M.avium_104 QRQ--RFARVYVDVAAAQARTATTVRRLAAGEAVGADSSIDKLLFGRAEK
Mflv_2435|M.gilvum_PYR-GCK S----DMGEVYLALHTLRCRSRATQHRLAEGHKLGPDTSIDKVLLAGAEQ
Mvan_4217|M.vanbaalenii_PYR-1 Q----DMGEVYLALHTLRCRSRATQHRLADGHKLGPDTSIDKVLLATAEQ
MSMEG_4844|M.smegmatis_MC2_155 S----DLGEVYLALHTVRCRSAATQRRLAEGHKLGPDTSIDKVLLANAEQ
MMAR_4748|M.marinum_M EY---DLGAAYLGLHTLRCRSRDTQHRLAGGSRLGPETSIDKVLLATAEQ
MLBr_00737|M.leprae_Br4923 SISTFQSIQFMLADMAMKVEAARLIVYAAAARAERGEPDLG-FISAASKC
: : :. .: .
Mb3590c|M.bovis_AF2122/97 NLGELAMDVIGKPGMTMP---------------DGEFDEWQRLYLFTRAD
Rv3560c|M.tuberculosis_H37Rv NLGELAMDVIGKPGMTMP---------------DGEFDEWQRLYLFTRAD
MAB_0597|M.abscessus_ATCC_1997 DLGELAMEIIGTSTLLTN---------------AGEMDEWQRLFLFSRAD
MUL_2892|M.ulcerans_Agy99 RYTELAVEILGLDALCPSGPGNGEARVVPQAGTANSPACWMDELLYARAA
TH_3751|M.thermoresistible__bu DVNDLIMDIARDHIMVDP-----------LGADPAELDTVRAEWWYSRAA
MAV_2563|M.avium_104 EVNDLILEIEREHLIAG------------TGRGGAELDTARAEWWYSRAA
Mflv_2435|M.gilvum_PYR-GCK RLYDTVRDLLPGAIELD-------------------DTPWRTEYLYSRAA
Mvan_4217|M.vanbaalenii_PYR-1 RLYDTARDLLPGVVELD-------------------DTEWRTEYLYSRAA
MSMEG_4844|M.smegmatis_MC2_155 LLYDTARNLLPGVIELE-------------------DSEWRTEYLYSRAA
MMAR_4748|M.marinum_M RLYDTVRDLLPATLELD-------------------DTPWRPEYLYSRAA
MLBr_00737|M.leprae_Br4923 FASDIAMEVTTDAVQLFG------------GAGYTSDFPVERFMRDAKIT
: :: ::
Mb3590c|M.bovis_AF2122/97 TIYGGSNEIQRNIIAERVLGLPREAKG----
Rv3560c|M.tuberculosis_H37Rv TIYGGSNEIQRNIIAERVLGLPREAKG----
MAB_0597|M.abscessus_ATCC_1997 TIYGGSNEIQRNIISERVLGLPREAR-----
MUL_2892|M.ulcerans_Agy99 TIYAGSSQIQRNVIGEQLLGLPKEPRREAVH
TH_3751|M.thermoresistible__bu TIMGGTAEVQRGIIADHLLGLPKEKRA----
MAV_2563|M.avium_104 TVMGGTAEVQRGIIADHLLGLPKEKR-----
Mflv_2435|M.gilvum_PYR-GCK TIYGGTAEVQRNIIARRLLDLGKE-------
Mvan_4217|M.vanbaalenii_PYR-1 TIYGGTAEVQRNIIARRLLDLGKE-------
MSMEG_4844|M.smegmatis_MC2_155 TIYGGTAEVQRNIIAHRLLDLPKG-------
MMAR_4748|M.marinum_M TIYGGTAEIQRNIIARRLLGLGSEK------
MLBr_00737|M.leprae_Br4923 QIYEGTNQIQRVVMSRALLR-----------
: *: ::** ::. :*