For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3746 | - | - | 100% (328) | iron-sulfur cluster-binding protein, Rieske family protein |
| M. thermoresistible (build 8) | TH_3046 | - | e-163 | 78.59% (327) | PUTATIVE iron-sulfur cluster-binding protein, Rieske family |
| M. thermoresistible (build 8) | TH_2615 | - | 7e-69 | 42.90% (331) | PUTATIVE Rieske [2Fe-2S] domain protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3556 | - | 2e-22 | 27.95% (347) | oxidoreductase |
| M. gilvum PYR-GCK | Mflv_2753 | - | 3e-71 | 42.68% (328) | Rieske (2Fe-2S) region |
| M. tuberculosis H37Rv | Rv3526 | - | 2e-22 | 27.95% (347) | oxidoreductase |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0726 | - | 1e-76 | 46.99% (332) | hypothetical protein MAB_0726 |
| M. marinum M | MMAR_1935 | - | 7e-68 | 42.77% (332) | oxidoreductase |
| M. avium 104 | MAV_2544 | - | 1e-145 | 71.78% (326) | iron-sulfur cluster-binding protein, Rieske family protein |
| M. smegmatis MC2 155 | MSMEG_0734 | - | 2e-69 | 43.20% (331) | Rieske (2Fe-2S) domain-containing protein |
| M. ulcerans Agy99 | MUL_2161 | - | 2e-68 | 42.94% (326) | oxidoreductase |
| M. vanbaalenii PYR-1 | Mvan_3784 | - | 2e-70 | 43.67% (332) | Rieske (2Fe-2S) domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment
TH_3746|M.thermoresistible__bu ---------MTRLP-SSVPT----GWFQVAWSAEITDRAVAPLRYFGRDL
MAV_2544|M.avium_104 ---------MQTLP-SMLPT----GWFQVAWSADLAVAEVIPMHYFGRDL
Mflv_2753|M.gilvum_PYR-GCK ---------MAPPPLSMKPT----GWFQVAWSDEIAIGDVHTMKYFGQEM
Mvan_3784|M.vanbaalenii_PYR-1 ---------MAKPPLSMKPT----GWFQVAWSDEIGIGDVHTMKYFDQEM
MMAR_1935|M.marinum_M ---------MAKPPLSMKPT----GWFQVAWSDEIGVGDVRTMKYFDQEL
MUL_2161|M.ulcerans_Agy99 ---------MAKPPLSTKPT----GWFQVAWSDEIGVGDVRTMKYFDQEL
MSMEG_0734|M.smegmatis_MC2_155 ---MGGTATMAKPPLSMKPT----GWFQVAWSDEVGVGDVRAMKYFGQEM
MAB_0726|M.abscessus_ATCC_1997 ---------MPKPPLSMRPT----GWFQVAWSAQITVGAVHRMSYFGREM
Mb3556|M.bovis_AF2122/97 MSTDTSGVGVREIDAGALPTRYARGWHCLGVAKDYLEGKPHGVEAFGTKL
Rv3526|M.tuberculosis_H37Rv MSTDTSGVGVREIDAGALPTRYARGWHCLGVAKDYLEGKPHGVEAFGTKL
: . ** **. :. : : : *. .:
TH_3746|M.thermoresistible__bu VAFRQADGTVSVLDAHCEHLGASLAHGGCVVDDGIQCPFHGWVWDGQGRN
MAV_2544|M.avium_104 VAFRQLDGVVKVLDAHCQHLGASLAHGGCVVEEGIQCPFHGWVWNGAGRN
Mflv_2753|M.gilvum_PYR-GCK VAWRAGSGQLTVMNAYCEHLGAHLGFGGSVQGEVLQCPFHGWQWNQQGRN
Mvan_3784|M.vanbaalenii_PYR-1 VAWRAESGQLTVMNAYCEHLGAHLGFGGTVHGEVLQCPFHGWQWNQQGRN
MMAR_1935|M.marinum_M IAWRAESGQLTVMNAYCEHLGAHLGYGGKVVGEVLQCPFHGWQWNQLGRN
MUL_2161|M.ulcerans_Agy99 IAWRAESGQLTVMNAYCEHLGAHLGYGGKVVGEVLQCPFHGWQWNQLGRN
MSMEG_0734|M.smegmatis_MC2_155 VAWRSESGQVTVMNAYCEHLGAHLGFGGTVVGEVIQCPFHGWQWNAEGRN
MAB_0726|M.abscessus_ATCC_1997 VAWRAQSGELAVMDAHCEHLGAHLGHGGHVEGDRIVCPFHGWEWNRDGRN
Mb3556|M.bovis_AF2122/97 VVFADSHGDLKVLDGYCRHMGGDLSEG-TVKGDEVACPFHDWRWGGDGRC
Rv3526|M.tuberculosis_H37Rv VVFADSHGDLKVLDGYCRHMGGDLSEG-TVKGDEVACPFHDWRWGGDGRC
:.: * : *::.:*.*:*. *. * * : : ****.* *. **
TH_3746|M.thermoresistible__bu VRIPYEKRPNRGRRIRSYPVVEAHDTIYIWHDVSGA--EPRWRLPDTFDV
MAV_2544|M.avium_104 VHIPYQDRPNKARRVRSYPVAELNDSILIWHDSAGR--EPLWDAPDAFAV
Mflv_2753|M.gilvum_PYR-GCK VCIPYEDRPNRGRRIKTYPVIERNESVYIWHDIENR--EPFFDAPDVFAS
Mvan_3784|M.vanbaalenii_PYR-1 VCIPYEDRPNRGRRIKTYPVAERNASIYIWHDIENR--EPFFDAPDVFAS
MMAR_1935|M.marinum_M VCIPYQDRPNRGRRIRTYPVVERNASVYLWHDVEGR--APFFDAPDVFAG
MUL_2161|M.ulcerans_Agy99 VCIPYQDRPNRGRRIRTYPVVERNASVYLWHDVEGR--APFFDAPDVFAG
MSMEG_0734|M.smegmatis_MC2_155 VCIPYQDRPNRGRRMPTYPVAERNEAIYIWHDVLGR--EPFFDAPDVFAS
MAB_0726|M.abscessus_ATCC_1997 VCIPYERRPNPLRRIRSYPVVERNEAVYIWHDTAGR--PPYFDVPDVFTG
Mb3556|M.bovis_AF2122/97 KLVPYARRTPRMARTRSWTTDVRSGLLFVWHDHEGNPPDPAVRIPEIPEA
Rv3526|M.tuberculosis_H37Rv KLVPYARRTPRMARTRSWTTDVRSGLLFVWHDHEGNPPDPAVRIPEIPEA
:** *. * ::.. : :*** . * *:
TH_3746|M.thermoresistible__bu LGDHVSSRSYYEFTPDCRTRFERVKVHPQVIAENAVDPHHFRFVHGTPIS
MAV_2544|M.avium_104 LGDHVRSRRFHPFGADCRTRHERVKVHPQVIAENAVDPHHFQFVHRTPIS
Mflv_2753|M.gilvum_PYR-GCK FGTDATADDYYP---QQRLFEQGHEMHPQYVLENGVDFAHFKYVHGTPIN
Mvan_3784|M.vanbaalenii_PYR-1 FGDGSSADDYYP---PQRLFEQSLEMHPQYVLENGVDFAHFKYVHGTPIN
MMAR_1935|M.marinum_M FNDGSSVADYYP---QQRLYRHTLELHPQYVLENGVDFAHFKYVHNTPIV
MUL_2161|M.ulcerans_Agy99 FNDGSSVADYYP---QQRLYRHTLELHPQYVLENGVDFAHFKYVHNTPIV
MSMEG_0734|M.smegmatis_MC2_155 FADGSSADGYYP---QQRLYRQALELHPQYVLENGVDFAHFKYVHQTPIV
MAB_0726|M.abscessus_ATCC_1997 FGDGGSARDYYPGYPHSTLYRERLQLHPQYVLENGVDFAHFKYVHKTPFI
Mb3556|M.bovis_AF2122/97 ASDEWTDWRWNR------ILIEGSNCR--DIIDNVTDMAHFFYIHFG--L
Rv3526|M.tuberculosis_H37Rv ASDEWTDWRWNR------ILIEGSNCR--DIIDNVTDMAHFFYIHFG--L
: . : : : :* .* ** ::*
TH_3746|M.thermoresistible__bu PRVLRETRDEATWAAKVGFGRRWADGLDRPEDTLNTIEIYWSGIGVSFTA
MAV_2544|M.avium_104 PVVLRESTDSSTWSAKVGFGRRWSDGLDRTGDTMNTIEIYWSGIGLSYNG
Mflv_2753|M.gilvum_PYR-GCK PIFTRHDFDDAISYVDFTITFEGDDGQ-SIDDVRSGVEAINGGLGIAVTK
Mvan_3784|M.vanbaalenii_PYR-1 PIFTRHDFDEPISYVDFTITFEGDDGQ-RIEEVNSGVEAINGGLGIAVTK
MMAR_1935|M.marinum_M PVFTRHDFDGPVSFVDFTITFEGDDGQ-QIEDINSGVEAINGGLGVAVTK
MUL_2161|M.ulcerans_Agy99 PVFTRHDFDGPVSFVDFTITFEGDDGQ-QIEDINSGVEAINGGLGVAVTK
MSMEG_0734|M.smegmatis_MC2_155 PVFTRHDFAEPWSYVDFTITFEGDENQ-TIDDVNSGVQAINGGLGIAVTK
MAB_0726|M.abscessus_ATCC_1997 PRFTRQEFGTPISYVDFTIAFDEIPGM-SAEDIKSGVQAINGGLGVAVTK
Mb3556|M.bovis_AF2122/97 PTYFKNVFEGHIASQYLHNVGRPDVDDLGTSYGEAHLDSEASYFGPSFMI
Rv3526|M.tuberculosis_H37Rv PTYFKNVFEGHIASQYLHNVGRPDVDDLGTSYGEAHLDSEASYFGPSFMI
* :. . . :: . :* :
TH_3746|M.thermoresistible__bu EHLREGV------RVISINATPVDDTTSDIFASYWISDE---GADNFVER
MAV_2544|M.avium_104 EHVRDGI------RVISICATPVDDTRSDIFAGYWISEETSEGPGDFEAR
Mflv_2753|M.gilvum_PYR-GCK SWGMIDN------RTIS-AITPVDDSTSDVRFMVYIGRPKGEVRNPERAR
Mvan_3784|M.vanbaalenii_PYR-1 SWGMIDN------RTIS-AITPVDESTSDVRFMVYIGRPKGQVRDPERAR
MMAR_1935|M.marinum_M SWGMVDN------RTIS-AITPVDESTSDVRFMVYIGRTPG--KDPARAE
MUL_2161|M.ulcerans_Agy99 SWGMVDN------RTIS-AITPVDESTSDVRFMVYIGRTPG--KDPARAE
MSMEG_0734|M.smegmatis_MC2_155 SWGMIDN------RTIS-AVTPVDESTCDVRFMVYIGRTPG--RDDERSA
MAB_0726|M.abscessus_ATCC_1997 SWGMVDN------RTVS-AVTPVDDETCDVRFTVFIGRQPG--DDSAEPP
Mb3556|M.bovis_AF2122/97 NWLHNRYGNYKSESILINCHYPVTQNSFVLQWGVIVEKPKG--MSEEMTD
Rv3526|M.tuberculosis_H37Rv NWLHNRYGNYKSESILINCHYPVTQNSFVLQWGVIVEKPKG--MSEEMTD
. : ** : : : .
TH_3746|M.thermoresistible__bu LDSAKL------ALPDDIRIWEHQRYTDKPALAPSEADGFKELRAWARGF
MAV_2544|M.avium_104 LAAAKL------ALPDDIRIWEHQKYLEPPGLATSEAAGFRALRRWASGF
Mflv_2753|M.gilvum_PYR-GCK VKAEEFGAEVIRQFRQDIHIWAHQRYSDPPALASSELKGFTAIREWAKKF
Mvan_3784|M.vanbaalenii_PYR-1 TKAEEFGAEVIRQFRQDIHIWAHQRYSDPPALASSELAGFTAIREWAKKF
MMAR_1935|M.marinum_M HKAAEFGREVIRQFEQDIQIWAHQRYCDPPALTTDELAGFTAIRRWAKQF
MUL_2161|M.ulcerans_Agy99 LKAAEFGREVIRQFEPDIQIWAHQRYCDPPTLTTDELAGFTAIRRWAKQF
MSMEG_0734|M.smegmatis_MC2_155 TKAAEFGEEVIRQFTQDIHIWSHQRYSDPPALATAEYEGFTAIRKWAMQF
MAB_0726|M.abscessus_ATCC_1997 QSAKTFAQAIIDQFLADIHIWSHQRYSDPPALVRAEYEGFIALRKWATQF
Mb3556|M.bovis_AF2122/97 KLSRVFTEGVSKGFLQDVEIWKHKTRIDNP-LLVEEDGAVYQLRRWYEQF
Rv3526|M.tuberculosis_H37Rv KLSRVFTEGVSKGFLQDVEIWKHKTRIDNP-LLVEEDGAVYQLRRWYEQF
: : : *:.** *: : * * * .. :* * *
TH_3746|M.thermoresistible__bu YPEPV--HAG----------------------------------------
MAV_2544|M.avium_104 YPEPE--AAAEPVAHGV---------------------------------
Mflv_2753|M.gilvum_PYR-GCK YPDGLGGSAAELAARTAN--------------------------------
Mvan_3784|M.vanbaalenii_PYR-1 YPDGKGGSAAELAARSAH--------------------------------
MMAR_1935|M.marinum_M YPDGIGGSAAEVYAALQKG-------------------------------
MUL_2161|M.ulcerans_Agy99 YPDGISGSAAEVYAALQKG-------------------------------
MSMEG_0734|M.smegmatis_MC2_155 YPDGRGGSAADLNRRGSAADLASIDQKGTTT-------------------
MAB_0726|M.abscessus_ATCC_1997 YPEE---STA----------------------------------------
Mb3556|M.bovis_AF2122/97 YVDVADIKPEMVERFEIEVDTKRANEFWNAEVEKNLKSREVSDDVPAEQH
Rv3526|M.tuberculosis_H37Rv YVDVADIKPEMVERFEIEVDTKRANEFWNAEVEKNLKSREVSDDVPAEQH
* : .