For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MQTLPSMLPTGWFQVAWSADLAVAEVIPMHYFGRDLVAFRQLDGVVKVLDAHCQHLGASLAHGGCVVEEG IQCPFHGWVWNGAGRNVHIPYQDRPNKARRVRSYPVAELNDSILIWHDSAGREPLWDAPDAFAVLGDHVR SRRFHPFGADCRTRHERVKVHPQVIAENAVDPHHFQFVHRTPISPVVLRESTDSSTWSAKVGFGRRWSDG LDRTGDTMNTIEIYWSGIGLSYNGEHVRDGIRVISICATPVDDTRSDIFAGYWISEETSEGPGDFEARLA AAKLALPDDIRIWEHQKYLEPPGLATSEAAGFRALRRWASGFYPEPEAAAEPVAHGV
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. avium 104 | MAV_2544 | - | - | 100% (337) | iron-sulfur cluster-binding protein, Rieske family protein |
M. avium 104 | MAV_1859 | - | e-136 | 66.47% (331) | iron-sulfur cluster-binding protein, Rieske family protein |
M. avium 104 | MAV_3666 | - | 1e-69 | 42.02% (326) | Rieske (2Fe-2S) domain-containing protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3556 | - | 7e-22 | 26.87% (335) | oxidoreductase |
M. gilvum PYR-GCK | Mflv_2753 | - | 2e-72 | 42.64% (326) | Rieske (2Fe-2S) region |
M. tuberculosis H37Rv | Rv3526 | - | 7e-22 | 26.87% (335) | oxidoreductase |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_0726 | - | 3e-72 | 43.03% (330) | hypothetical protein MAB_0726 |
M. marinum M | MMAR_1935 | - | 6e-72 | 42.90% (324) | oxidoreductase |
M. smegmatis MC2 155 | MSMEG_0734 | - | 4e-73 | 44.34% (327) | Rieske (2Fe-2S) domain-containing protein |
M. thermoresistible (build 8) | TH_3046 | - | 1e-150 | 73.01% (326) | PUTATIVE iron-sulfur cluster-binding protein, Rieske family |
M. ulcerans Agy99 | MUL_2161 | - | 2e-71 | 42.94% (326) | oxidoreductase |
M. vanbaalenii PYR-1 | Mvan_3784 | - | 2e-71 | 42.14% (337) | Rieske (2Fe-2S) domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment MAV_2544|M.avium_104 ---------MQTLP-SMLPT----GWFQVAWSADLAVAEVIPMHYFGRDL TH_3046|M.thermoresistible__bu ---------MAELP-SMSPT----GWFQIAWSADITERAVVPLHYFGRDL Mflv_2753|M.gilvum_PYR-GCK ---------MAPPPLSMKPT----GWFQVAWSDEIAIGDVHTMKYFGQEM Mvan_3784|M.vanbaalenii_PYR-1 ---------MAKPPLSMKPT----GWFQVAWSDEIGIGDVHTMKYFDQEM MMAR_1935|M.marinum_M ---------MAKPPLSMKPT----GWFQVAWSDEIGVGDVRTMKYFDQEL MUL_2161|M.ulcerans_Agy99 ---------MAKPPLSTKPT----GWFQVAWSDEIGVGDVRTMKYFDQEL MSMEG_0734|M.smegmatis_MC2_155 ---MGGTATMAKPPLSMKPT----GWFQVAWSDEVGVGDVRAMKYFGQEM MAB_0726|M.abscessus_ATCC_1997 ---------MPKPPLSMRPT----GWFQVAWSAQITVGAVHRMSYFGREM Mb3556|M.bovis_AF2122/97 MSTDTSGVGVREIDAGALPTRYARGWHCLGVAKDYLEGKPHGVEAFGTKL Rv3526|M.tuberculosis_H37Rv MSTDTSGVGVREIDAGALPTRYARGWHCLGVAKDYLEGKPHGVEAFGTKL : . ** **. :. : : : *. .: MAV_2544|M.avium_104 VAFRQLDGVVKVLDAHCQHLGASLAHGGCVVEEGIQCPFHGWVWNGAGRN TH_3046|M.thermoresistible__bu VAFRKADGSVSVLDAHCQHLGANLAHGGCVVEDGIQCPFHGWVWDGEGRN Mflv_2753|M.gilvum_PYR-GCK VAWRAGSGQLTVMNAYCEHLGAHLGFGGSVQGEVLQCPFHGWQWNQQGRN Mvan_3784|M.vanbaalenii_PYR-1 VAWRAESGQLTVMNAYCEHLGAHLGFGGTVHGEVLQCPFHGWQWNQQGRN MMAR_1935|M.marinum_M IAWRAESGQLTVMNAYCEHLGAHLGYGGKVVGEVLQCPFHGWQWNQLGRN MUL_2161|M.ulcerans_Agy99 IAWRAESGQLTVMNAYCEHLGAHLGYGGKVVGEVLQCPFHGWQWNQLGRN MSMEG_0734|M.smegmatis_MC2_155 VAWRSESGQVTVMNAYCEHLGAHLGFGGTVVGEVIQCPFHGWQWNAEGRN MAB_0726|M.abscessus_ATCC_1997 VAWRAQSGELAVMDAHCEHLGAHLGHGGHVEGDRIVCPFHGWEWNRDGRN Mb3556|M.bovis_AF2122/97 VVFADSHGDLKVLDGYCRHMGGDLSEG-TVKGDEVACPFHDWRWGGDGRC Rv3526|M.tuberculosis_H37Rv VVFADSHGDLKVLDGYCRHMGGDLSEG-TVKGDEVACPFHDWRWGGDGRC :.: * : *::.:*.*:*. *. * * : : ****.* *. ** MAV_2544|M.avium_104 VHIPYQDRPNKARRVRSYPVAELNDSILIWHDSAGR--EPLWDAPDAFAV TH_3046|M.thermoresistible__bu VRIPYEKRPNRGRRVRSYPVTEANDSIYIWHDATGT--APQWQVPDGRAV Mflv_2753|M.gilvum_PYR-GCK VCIPYEDRPNRGRRIKTYPVIERNESVYIWHDIENR--EPFFDAPDVFAS Mvan_3784|M.vanbaalenii_PYR-1 VCIPYEDRPNRGRRIKTYPVAERNASIYIWHDIENR--EPFFDAPDVFAS MMAR_1935|M.marinum_M VCIPYQDRPNRGRRIRTYPVVERNASVYLWHDVEGR--APFFDAPDVFAG MUL_2161|M.ulcerans_Agy99 VCIPYQDRPNRGRRIRTYPVVERNASVYLWHDVEGR--APFFDAPDVFAG MSMEG_0734|M.smegmatis_MC2_155 VCIPYQDRPNRGRRMPTYPVAERNEAIYIWHDVLGR--EPFFDAPDVFAS MAB_0726|M.abscessus_ATCC_1997 VCIPYERRPNPLRRIRSYPVVERNEAVYIWHDTAGR--PPYFDVPDVFTG Mb3556|M.bovis_AF2122/97 KLVPYARRTPRMARTRSWTTDVRSGLLFVWHDHEGNPPDPAVRIPEIPEA Rv3526|M.tuberculosis_H37Rv KLVPYARRTPRMARTRSWTTDVRSGLLFVWHDHEGNPPDPAVRIPEIPEA :** *. * ::.. . : :*** . * *: MAV_2544|M.avium_104 LGDHVRSRRFHPFGADCRTRHERVKVHPQVIAENAVDPHHFQFVHRTPIS TH_3046|M.thermoresistible__bu LGNHVASRNYYEFTEECRTRFERVKVHPQVIAENAVDPHHFRFVHRTAIS Mflv_2753|M.gilvum_PYR-GCK FGTDATADDYYP---QQRLFEQGHEMHPQYVLENGVDFAHFKYVHGTPIN Mvan_3784|M.vanbaalenii_PYR-1 FGDGSSADDYYP---PQRLFEQSLEMHPQYVLENGVDFAHFKYVHGTPIN MMAR_1935|M.marinum_M FNDGSSVADYYP---QQRLYRHTLELHPQYVLENGVDFAHFKYVHNTPIV MUL_2161|M.ulcerans_Agy99 FNDGSSVADYYP---QQRLYRHTLELHPQYVLENGVDFAHFKYVHNTPIV MSMEG_0734|M.smegmatis_MC2_155 FADGSSADGYYP---QQRLYRQALELHPQYVLENGVDFAHFKYVHQTPIV MAB_0726|M.abscessus_ATCC_1997 FGDGGSARDYYPGYPHSTLYRERLQLHPQYVLENGVDFAHFKYVHKTPFI Mb3556|M.bovis_AF2122/97 ASDEWTDWRWNR------ILIEGSNCR--DIIDNVTDMAHFFYIHFG--L Rv3526|M.tuberculosis_H37Rv ASDEWTDWRWNR------ILIEGSNCR--DIIDNVTDMAHFFYIHFG--L : . : : : :* .* ** ::* MAV_2544|M.avium_104 PVVLRESTDSSTWSAKVGFGRRWSDGLDRTGDTMNTIEIYWSGIGLSYNG TH_3046|M.thermoresistible__bu PRVLHETRDEVTWSAKVGFGERWADGVDRRDDTINTIEIYWSGVGFSFTG Mflv_2753|M.gilvum_PYR-GCK PIFTRHDFDDAISYVDFTITFEGDDGQ-SIDDVRSGVEAINGGLGIAVTK Mvan_3784|M.vanbaalenii_PYR-1 PIFTRHDFDEPISYVDFTITFEGDDGQ-RIEEVNSGVEAINGGLGIAVTK MMAR_1935|M.marinum_M PVFTRHDFDGPVSFVDFTITFEGDDGQ-QIEDINSGVEAINGGLGVAVTK MUL_2161|M.ulcerans_Agy99 PVFTRHDFDGPVSFVDFTITFEGDDGQ-QIEDINSGVEAINGGLGVAVTK MSMEG_0734|M.smegmatis_MC2_155 PVFTRHDFAEPWSYVDFTITFEGDENQ-TIDDVNSGVQAINGGLGIAVTK MAB_0726|M.abscessus_ATCC_1997 PRFTRQEFGTPISYVDFTIAFDEIPGM-SAEDIKSGVQAINGGLGVAVTK Mb3556|M.bovis_AF2122/97 PTYFKNVFEGHIASQYLHNVGRPDVDDLGTSYGEAHLDSEASYFGPSFMI Rv3526|M.tuberculosis_H37Rv PTYFKNVFEGHIASQYLHNVGRPDVDDLGTSYGEAHLDSEASYFGPSFMI * :. . . :: . .* : MAV_2544|M.avium_104 EHVRDGI------RVISICATPVDDTRSDIFAGYWIS------EETSEGP TH_3046|M.thermoresistible__bu EHLREGV------RIISVCATPVDDTRSDIFAGYWIS------DESND-- Mflv_2753|M.gilvum_PYR-GCK SWGMIDN------RTIS-AITPVDDSTSDVRFMVYIGRPKGEVRNPERAR Mvan_3784|M.vanbaalenii_PYR-1 SWGMIDN------RTIS-AITPVDESTSDVRFMVYIGRPKGQVRDPERAR MMAR_1935|M.marinum_M SWGMVDN------RTIS-AITPVDESTSDVRFMVYIGRTPG--KDPARAE MUL_2161|M.ulcerans_Agy99 SWGMVDN------RTIS-AITPVDESTSDVRFMVYIGRTPG--KDPARAE MSMEG_0734|M.smegmatis_MC2_155 SWGMIDN------RTIS-AVTPVDESTCDVRFMVYIGRTPG--RDDERSA MAB_0726|M.abscessus_ATCC_1997 SWGMVDN------RTVS-AVTPVDDETCDVRFTVFIGRQPG--DDSAEPP Mb3556|M.bovis_AF2122/97 NWLHNRYGNYKSESILINCHYPVTQNSFVLQWGVIVEKPKG--MSEEMTD Rv3526|M.tuberculosis_H37Rv NWLHNRYGNYKSESILINCHYPVTQNSFVLQWGVIVEKPKG--MSEEMTD . : . ** : : : . MAV_2544|M.avium_104 GDFEARLAAAKLALPDDIRIWEHQKYLEPPGLATSEAAGFRALRRWASGF TH_3046|M.thermoresistible__bu -DFAERLAVAKLALPDDIRIWEHQRYMERPALAPSEAAGYDALRSWAKGF Mflv_2753|M.gilvum_PYR-GCK VKAEEFGAEVIRQFRQDIHIWAHQRYSDPPALASSELKGFTAIREWAKKF Mvan_3784|M.vanbaalenii_PYR-1 TKAEEFGAEVIRQFRQDIHIWAHQRYSDPPALASSELAGFTAIREWAKKF MMAR_1935|M.marinum_M HKAAEFGREVIRQFEQDIQIWAHQRYCDPPALTTDELAGFTAIRRWAKQF MUL_2161|M.ulcerans_Agy99 LKAAEFGREVIRQFEPDIQIWAHQRYCDPPTLTTDELAGFTAIRRWAKQF MSMEG_0734|M.smegmatis_MC2_155 TKAAEFGEEVIRQFTQDIHIWSHQRYSDPPALATAEYEGFTAIRKWAMQF MAB_0726|M.abscessus_ATCC_1997 QSAKTFAQAIIDQFLADIHIWSHQRYSDPPALVRAEYEGFIALRKWATQF Mb3556|M.bovis_AF2122/97 KLSRVFTEGVSKGFLQDVEIWKHKTRIDNP-LLVEEDGAVYQLRRWYEQF Rv3526|M.tuberculosis_H37Rv KLSRVFTEGVSKGFLQDVEIWKHKTRIDNP-LLVEEDGAVYQLRRWYEQF : *:.** *: : * * * . :* * * MAV_2544|M.avium_104 YPEPEAAAEPVAHGV----------------------------------- TH_3046|M.thermoresistible__bu YPEP------AGHGL----------------------------------- Mflv_2753|M.gilvum_PYR-GCK YPDGLGGSAAELAARTAN-------------------------------- Mvan_3784|M.vanbaalenii_PYR-1 YPDGKGGSAAELAARSAH-------------------------------- MMAR_1935|M.marinum_M YPDGIGGSAAEVYAALQKG------------------------------- MUL_2161|M.ulcerans_Agy99 YPDGISGSAAEVYAALQKG------------------------------- MSMEG_0734|M.smegmatis_MC2_155 YPDGRGGSAADLNRRGSAADLASIDQKGTTT------------------- MAB_0726|M.abscessus_ATCC_1997 YPEE---STA---------------------------------------- Mb3556|M.bovis_AF2122/97 YVDVADIKPEMVERFEIEVDTKRANEFWNAEVEKNLKSREVSDDVPAEQH Rv3526|M.tuberculosis_H37Rv YVDVADIKPEMVERFEIEVDTKRANEFWNAEVEKNLKSREVSDDVPAEQH * :