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aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3339 | - | - | 100% (409) | putative L-carnitine dehydratase/bile acid-inducible protein F |
| M. thermoresistible (build 8) | TH_3905 | - | e-105 | 47.74% (398) | PUTATIVE Formyl-CoA transferase |
| M. thermoresistible (build 8) | TH_4303 | - | 2e-62 | 33.57% (426) | PUTATIVE putative L-carnitine dehydratase/bile acid-inducible |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1897 | - | 4e-43 | 28.46% (397) | hypothetical protein Mb1897 |
| M. gilvum PYR-GCK | Mflv_4465 | - | 1e-106 | 48.37% (399) | Formyl-CoA transferase |
| M. tuberculosis H37Rv | Rv1866 | - | 4e-43 | 28.46% (397) | hypothetical protein Rv1866 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_4651c | - | 1e-101 | 46.73% (398) | putative L-carnitine dehydratase |
| M. marinum M | MMAR_1494 | - | 3e-99 | 45.96% (396) | hypothetical protein MMAR_1494 |
| M. avium 104 | MAV_4024 | - | 1e-104 | 48.34% (391) | caib/baif family protein |
| M. smegmatis MC2 155 | MSMEG_2073 | - | 1e-103 | 46.62% (399) | CAIB/BAIF family protein |
| M. ulcerans Agy99 | MUL_2446 | - | 2e-99 | 45.52% (402) | hypothetical protein MUL_2446 |
| M. vanbaalenii PYR-1 | Mvan_1895 | - | 1e-108 | 49.62% (399) | L-carnitine dehydratase/bile acid-inducible protein F |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_1494|M.marinum_M --------------------------------------------------
MUL_2446|M.ulcerans_Agy99 --------------------------------------------------
MAV_4024|M.avium_104 --------------------------------------------------
MAB_4651c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_4465|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1895|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_2073|M.smegmatis_MC2_155 --------------------------------------------------
TH_3339|M.thermoresistible__bu --------------------------------------------------
Mb1897|M.bovis_AF2122/97 MVTRLLADLGADVLKVQPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVL
Rv1866|M.tuberculosis_H37Rv MVTRLLADLGADVLKVEPPGGSPGRHVRPTLAGTSIGFAMHNANKRSAVL
MMAR_1494|M.marinum_M --------------------------------------------------
MUL_2446|M.ulcerans_Agy99 --------------------------------------------------
MAV_4024|M.avium_104 --------------------------------------------------
MAB_4651c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_4465|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1895|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_2073|M.smegmatis_MC2_155 --------------------------------------------------
TH_3339|M.thermoresistible__bu --------------------------------------------------
Mb1897|M.bovis_AF2122/97 NPLDESDRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVAL
Rv1866|M.tuberculosis_H37Rv NPLDESDRRRFLDLAASADIVVDCGLPGQAAAYGASCAELADRYRHLVAL
MMAR_1494|M.marinum_M --------------------------------------------------
MUL_2446|M.ulcerans_Agy99 --------------------------------------------------
MAV_4024|M.avium_104 --------------------------------------------------
MAB_4651c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_4465|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1895|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_2073|M.smegmatis_MC2_155 --------------------------------------------------
TH_3339|M.thermoresistible__bu --------------------------------------------------
Mb1897|M.bovis_AF2122/97 SITDFGAAGPRSSWRATDPVLYAMSGALSRSGPTAGTPVLPPDGIASATA
Rv1866|M.tuberculosis_H37Rv SITDFGAAGPRSSWRATDPVLYAMSGALSRSGPTAGTPVLPPDGIASATA
MMAR_1494|M.marinum_M --------------------------------------------------
MUL_2446|M.ulcerans_Agy99 --------------------------------------------------
MAV_4024|M.avium_104 --------------------------------------------------
MAB_4651c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_4465|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1895|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_2073|M.smegmatis_MC2_155 --------------------------------------------------
TH_3339|M.thermoresistible__bu --------------------------------------------------
Mb1897|M.bovis_AF2122/97 AVQAAWAVLVAYFNRLRCGTGDYIDFSRFDAVVMALDPPFGAHGQVAAGI
Rv1866|M.tuberculosis_H37Rv AVQAAWAVLVAYFNRLRCGTGDYIDFSRFDAVVMALDPPFGAHGQVAAGI
MMAR_1494|M.marinum_M --------------------------------------------------
MUL_2446|M.ulcerans_Agy99 --------------------------------------------------
MAV_4024|M.avium_104 --------------------------------------------------
MAB_4651c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_4465|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1895|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_2073|M.smegmatis_MC2_155 --------------------------------------------------
TH_3339|M.thermoresistible__bu --------------------------------------------------
Mb1897|M.bovis_AF2122/97 RSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRRWLGEPEDFQ
Rv1866|M.tuberculosis_H37Rv RSTGRWRGRPKNQDAYPIYPCRDGYVRFCVMAPRQWRGLRRWLGEPEDFQ
MMAR_1494|M.marinum_M --------------------------------------------------
MUL_2446|M.ulcerans_Agy99 --------------------------------------------------
MAV_4024|M.avium_104 --------------------------------------------------
MAB_4651c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_4465|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1895|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_2073|M.smegmatis_MC2_155 --------------------------------------------------
TH_3339|M.thermoresistible__bu --------------------------------------------------
Mb1897|M.bovis_AF2122/97 DPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP
Rv1866|M.tuberculosis_H37Rv DPKYDVIGARLAAWPQISVLVAKLCAEKTMKELVAAGQALGVPITAVLTP
MMAR_1494|M.marinum_M --------------------------------------------------
MUL_2446|M.ulcerans_Agy99 --------------------------------------------------
MAV_4024|M.avium_104 --------------------------------------------------
MAB_4651c|M.abscessus_ATCC_199 --------------------------------------------------
Mflv_4465|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_1895|M.vanbaalenii_PYR-1 --------------------------------------------------
MSMEG_2073|M.smegmatis_MC2_155 --------------------------------------------------
TH_3339|M.thermoresistible__bu --------------------------------------------------
Mb1897|M.bovis_AF2122/97 SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAG
Rv1866|M.tuberculosis_H37Rv SRILASEHFQAVGAITDAELVPGVRTGVPTGYFVVDGKRAGFRTPAPAAG
MMAR_1494|M.marinum_M --------MTEP----------GALDGIRVLELGTLIAGPFAGRLLGDMG
MUL_2446|M.ulcerans_Agy99 --------MTEP----------GALDGIRVLELGTLIAGPFAGRLLGDMG
MAV_4024|M.avium_104 --------MSAAGAA-------GPLDGIRVLELGTLIAGPFAGRLLGDMG
MAB_4651c|M.abscessus_ATCC_199 --------MTGA------------LDGIRVLELGTLIAGPFAGRLLGDMG
Mflv_4465|M.gilvum_PYR-GCK --------MTTG-----------PLDGIRVIEVGTLISGPFAGRLLGDMG
Mvan_1895|M.vanbaalenii_PYR-1 --------MTTG-----------PLDGIRVIEVGTLISGPFAGRLLGDMG
MSMEG_2073|M.smegmatis_MC2_155 --------MTAG-----------PLDGVRVLELGTLISGPFAGRLLGDMG
TH_3339|M.thermoresistible__bu --------MTTEVETTATQPTTGPLHGIRVVEMGSLLAGPIVGQMMGDLG
Mb1897|M.bovis_AF2122/97 QDEPRWLADPAPVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLG
Rv1866|M.tuberculosis_H37Rv QDEPRWLADPAPVPPPSGRVGGYPFEGLRILDLGIIVAGGELSRLFGDLG
. :.*:*::::* :::* .:::**:*
MMAR_1494|M.marinum_M ADVIKVEAPGAPDPLRTWGQAEVDGHHVFWTVHARNKRAITLDLRRPQGR
MUL_2446|M.ulcerans_Agy99 ADVIKVEAPGAPDPLRTWGQAEVDGHHVFWTVHARNKRAITLDLRRPQGR
MAV_4024|M.avium_104 ADVIKVELPRAPDPLRTWGQAEVDGHHVFWTVHARNKRAITLDLRHPRGR
MAB_4651c|M.abscessus_ATCC_199 AEVLKIEPPGAPDPLRTWGQAEVDGHHVFWTVHARNKKAITLDLRTEAGR
Mflv_4465|M.gilvum_PYR-GCK AEVIKVEPPGAPDPLRTWGQAELDGHHFFWTVHARNKKAVTLNLRVPEGR
Mvan_1895|M.vanbaalenii_PYR-1 AEVIKIEPPGAPDPLRTWGQAELDGHHFFWTVHARNKKAVTLNLRVPEGR
MSMEG_2073|M.smegmatis_MC2_155 AEVIKIELPSAPDPLRTWGQAELDGHHFFWTVHARNKKAVTLDLRKPKGR
TH_3339|M.thermoresistible__bu ADVVKIEDPGKGDPLRQWGQNRPKGQSLWFSIVGRNKRSVTINLREPRGQ
Mb1897|M.bovis_AF2122/97 AEVIKVESADHPDGLRQTRVGDAMSESFAWTHR--NHLALGLDLRNSEGK
Rv1866|M.tuberculosis_H37Rv AEVIKVESADHPDGLRQTRVGDAMSESFAWTHR--NHLALGLDLRNSEGK
*:*:*:* . * ** .. . :: *: :: ::** *:
MMAR_1494|M.marinum_M ELFLELVDKSDIVVENFRPGTLEKWDLGYDVLRERNPGIILVRVSGYGQT
MUL_2446|M.ulcerans_Agy99 ELFLELVDKSDIVVENFRPGTLEKWDLGYDVLRERNPGIILVRVSGYGQT
MAV_4024|M.avium_104 ELFCELVEKSDIVVENFRPGTLEKWNLGYDVLCERNPGIILVRVSGYGQT
MAB_4651c|M.abscessus_ATCC_199 ALFLDLVDKSDVIVENFRPGTLERWGLGYDVLAQRNKGIILVRVSGYGQT
Mflv_4465|M.gilvum_PYR-GCK DLFLDLVERSDVIVENFRPGTLEKWNLGYDVLRERNRGIILVRVSGYGQT
Mvan_1895|M.vanbaalenii_PYR-1 ELFLDLVERSDVIVENFRPGTLEKWGLGYDVLRERNRGIILVRVSGYGQT
MSMEG_2073|M.smegmatis_MC2_155 ELFLELVDRSDIIVENFRPGTLEKWDLGYDVLRQHNKGVILVRVSGYGQT
TH_3339|M.thermoresistible__bu ELVRQLVAEADVLVENFRPGTMERWGLGYSDLAEINPRLVIVRVSGFGQD
Mb1897|M.bovis_AF2122/97 AIFGRLVAESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNR
Rv1866|M.tuberculosis_H37Rv AIFGRLVAESDAVFANFKPGTLTSLGFSYDVLHAFNPRIVLAGSSAFGNR
:. ** .:* :. **:***: .:.*. * * :::. *.:*:
MMAR_1494|M.marinum_M GPDAHKAGYASVAEAASGLRHLNGFPGGPPPR-------LALSLGDSLAG
MUL_2446|M.ulcerans_Agy99 GPDAHKAGYASVAEAASGLRHLNGFPGGPPPR-------LALSLGDSLAG
MAV_4024|M.avium_104 GPDAAKAGYASVAEAASGLRHLNGFPGGPPPR-------LALSLGDSLAG
MAB_4651c|M.abscessus_ATCC_199 GPDAHKAGYASVAEAASGLRHLNGFPGGPPPR-------MALSIGDTLAG
Mflv_4465|M.gilvum_PYR-GCK GPDAHKAGYASVAEAASGLRHMNGFPGGPPPR-------LALSLGDSLAG
Mvan_1895|M.vanbaalenii_PYR-1 GPDAHKAGYASVAEAASGLRHMNGFPGGPPPR-------LALSLGDSLAG
MSMEG_2073|M.smegmatis_MC2_155 GPEAGKAGYASVAEAASGLRHMNGFPGGPPPR-------LALSLGDSLAG
TH_3339|M.thermoresistible__bu GPYASRPGYGAIGEAMGGLRYVVGDPSTPPSR-------VGISIGDTLAA
Mb1897|M.bovis_AF2122/97 GPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTIFPDHVVG
Rv1866|M.tuberculosis_H37Rv GPWSTRMGYGPLVRAATGVTRVWTSDEAQPDNSRHPFYDATTIFPDHVVG
** : : **..: .* *: : * . : * :..
MMAR_1494|M.marinum_M MFGAQGALAALYRRSVTGTGQVVDVALTESCLALQESTISDYDVGGVVRG
MUL_2446|M.ulcerans_Agy99 MFGPQGALAALYRRSVTGTGQVVDVALTESCLALQESTISDYDVGGVVRG
MAV_4024|M.avium_104 MFGAQGALAALYRRSVTGRGQVVDVALTESCLAVQESTIPDYDVGGVVRG
MAB_4651c|M.abscessus_ATCC_199 MFAAQGALAALYRRTVTGRGQVVDAALTESCLAVQESTIPDYDVGRVVRG
Mflv_4465|M.gilvum_PYR-GCK MFAAQGALAALYRRSVTGEGQIVDAALTESCLAVQESTIPDYDVGGVVRG
Mvan_1895|M.vanbaalenii_PYR-1 MFAAQGALAALYRRSVTGDGQVVDAALTESCLAVQESTIPDYDVGGVVRG
MSMEG_2073|M.smegmatis_MC2_155 MFAAQGALAALYRRSVTGEGQVVDTALTESCLAIQESTIPDYDVGGVVRG
TH_3339|M.thermoresistible__bu LFATIGALAALREREISGRGQMVDSAIYEAVLGVMESLVPEWTVSGYQRE
Mb1897|M.bovis_AF2122/97 RVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAAR--ATD
Rv1866|M.tuberculosis_H37Rv RVGALLALAALIHRDRTGGGAHVHISQAEVVVNQLDTMFVAEAAR--ATD
... ***** .* :* * *. : * : :: . .
MMAR_1494|M.marinum_M PSGTRLEGIAPSNIYRSADESWVVIAANQDTVFTRLCQAMGCPELATDDR
MUL_2446|M.ulcerans_Agy99 PSGTRLKGIAPSNIYRSADESWVVIAANQDTVFTRLCQAMGCPELATDDR
MAV_4024|M.avium_104 PSGTRLEGIAPSNIYRSADGSWVVIAANQDTVFARLCKAMGRAELATDER
MAB_4651c|M.abscessus_ATCC_199 PSGTRLEGIAPSNIYQSADGSWVVIAANQDTVFRRLCEAMGRPELSSDAR
Mflv_4465|M.gilvum_PYR-GCK PSGTRLEGIAPSNIYPTADGSWVVIAANQDTVFRRLCAAMGQPELATDER
Mvan_1895|M.vanbaalenii_PYR-1 PSGTRLEGIAPSNIYPTADGSWVVIAANQDTVFRRLCAAMGQPELATDER
MSMEG_2073|M.smegmatis_MC2_155 PSGTRLEGIAPSNIYQSANGSWVVIAANQDTVFRRLCAAMGRPELATDER
TH_3339|M.thermoresistible__bu RTGAILPKIAPSNVYPTSDDTWILIAANQDTVFRRLAEAMGRPELAEDER
Mb1897|M.bovis_AF2122/97 VAEIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPR
Rv1866|M.tuberculosis_H37Rv VAEIHPDTSVHAVYPCAGDDEWCVISIRSDDEWRRATSVFGQPELANDPR
: . : :.: * :*: ..* : * .:* .**: * *
MMAR_1494|M.marinum_M FATHRARGRNQDELDKIIGAWAAQRQPDEIIETLSAAGVIAGPINTVAEV
MUL_2446|M.ulcerans_Agy99 FATHRARGRNQDELDKIIGAWAAQRQPDEIIETLSAAGVIAGPINTVAEV
MAV_4024|M.avium_104 FATHVARGRIQDELDGIIGEWAAQRQPDEIIETLSAAGVIAGPINTVAEV
MAB_4651c|M.abscessus_ATCC_199 FANHVARGRNQDDLDAIIAQWAAQRLPTDIIDVLSAAGVIAGPINTVADV
Mflv_4465|M.gilvum_PYR-GCK FADHVARGRNQDEIDKIIGGWAAQRQPDEIISTLSEAGVISGPINTVAEV
Mvan_1895|M.vanbaalenii_PYR-1 FANHVARGRNQDELDKIIGAWAAERQPADIIATLSEAGVISGPINTVAEV
MSMEG_2073|M.smegmatis_MC2_155 FSDHLARGRNQDELDKIIGDWAAQRQPDEIISTLSDAGVIAGPINTVAEV
TH_3339|M.thermoresistible__bu YATHVARGEHQAELDEIVAEFTRRHTAAEVEALMHKHNVPVGKIYRPKEM
Mb1897|M.bovis_AF2122/97 FGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDI
Rv1866|M.tuberculosis_H37Rv FGASRSRVANRSELVAAVSAWTSTRTPVQAAGALQAAGVAAGPMNRPSDI
:. :* : :: :. :: : . : : .* * : ::
MMAR_1494|M.marinum_M VKDRQLRARGMLVEHYDERIGRNVLGPGIVPALSESPGQVRSAGPARPGQ
MUL_2446|M.ulcerans_Agy99 VKDRQLRARGMLVEHYDERIGRNVLGPGIVPALSESPGQVRSAGPARPGQ
MAV_4024|M.avium_104 VNDPQLRARDMLVEHYDERLRRNVLGPGIVPVLSESPGRVRNAGPARPGQ
MAB_4651c|M.abscessus_ATCC_199 VQDPQLKAREMLVEHFDERLGRSVLGPGVVPVLSESPGGVRNAGPARPGQ
Mflv_4465|M.gilvum_PYR-GCK VEDPQLQARGMIADHWDERIGRNVKGPGVVPVLSETPGTIRSAGSARPGQ
Mvan_1895|M.vanbaalenii_PYR-1 VKDPQLQARGMIADHWDERIGRNVKGPGVVPVLSETPGTIRSAGSSRPGE
MSMEG_2073|M.smegmatis_MC2_155 VNDPQLQARGMIADHWDERVQRNIKGPGVVPVLSESPGTIRNAGSARPGQ
TH_3339|M.thermoresistible__bu LADPQFRARESITSVDHPVLG-EIQMQNVFPRLSRTRGSIRWPGPG-LGE
Mb1897|M.bovis_AF2122/97 LEDPQLIERNLFRDMVHPLIARPLPAETGPAPFRHIPQAPQR-PAPLPGQ
Rv1866|M.tuberculosis_H37Rv LEDPQLIERNLFRDMVHPLIARPLPAETGPAPFRHIPQAPQR-PAPLPGQ
: * *: * : . . : : . : . : . *:
MMAR_1494|M.marinum_M HNDDVYIGLLGKSIEELEQLRAEEVL-------
MUL_2446|M.ulcerans_Agy99 HNDDVYIGLLGKSIEELEQLRAVEVL-------
MAV_4024|M.avium_104 HNDEVYRGLLGKTAEELEELRAQEVL-------
MAB_4651c|M.abscessus_ATCC_199 DNDDVYVGLLGKSAQDIERLRAEGVL-------
Mflv_4465|M.gilvum_PYR-GCK HNDEIYRDLLGRSAAELDKLQEEGVL-------
Mvan_1895|M.vanbaalenii_PYR-1 HNDEIYRGLLGKTDAELERLRAGGVL-------
MSMEG_2073|M.smegmatis_MC2_155 HNDEIYTGLLGHTADELQTLHDEGVL-------
TH_3339|M.thermoresistible__bu HTDEVLR-QLGLSDEELQKLHDAGVV-------
Mb1897|M.bovis_AF2122/97 DSVQICRKLLGMTADETERLINERVMFGPAVTA
Rv1866|M.tuberculosis_H37Rv DSVQICRKLLGMTADETERLINERVMFGPAVTA
.. :: ** : : : * *: