For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3040 | - | - | 100% (264) | putative ABC transporter, ATP-binding protein |
| M. thermoresistible (build 8) | TH_2751 | - | 2e-48 | 43.67% (229) | PUTATIVE putative ABC transporter related |
| M. thermoresistible (build 8) | TH_4156 | - | 5e-45 | 41.39% (244) | PUTATIVE putative Fe uptake system permease |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2419c | cysA1 | 4e-27 | 36.79% (212) | sulfate-transport ATP-binding protein ABC transporter CysA1 |
| M. gilvum PYR-GCK | Mflv_3884 | - | 1e-62 | 51.68% (238) | ABC transporter related |
| M. tuberculosis H37Rv | Rv2397c | cysA1 | 4e-27 | 36.79% (212) | sulfate-transport ATP-binding protein ABC transporter CysA1 |
| M. leprae Br4923 | MLBr_01113 | - | 7e-23 | 32.73% (220) | putative ABC transporter, ATP-binding component |
| M. abscessus ATCC 19977 | MAB_0548c | - | 2e-50 | 44.30% (228) | putative iron compound ABC transporter, ATP-binding protein |
| M. marinum M | MMAR_3715 | cysA1 | 1e-27 | 36.79% (212) | sulfate-transport ATP-binding protein ABC transporter CysA1 |
| M. avium 104 | MAV_0058 | - | 2e-29 | 33.20% (244) | ABC transporter, ATP-binding protein |
| M. smegmatis MC2 155 | MSMEG_4557 | - | 8e-66 | 52.24% (245) | ABC transporter, ATP-binding protein |
| M. ulcerans Agy99 | MUL_3658 | cysA1 | 4e-28 | 38.21% (212) | sulfate-transport ATP-binding protein ABC transporter CysA1 |
| M. vanbaalenii PYR-1 | Mvan_5731 | - | 5e-28 | 37.74% (212) | ABC transporter-related protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mb2419c|M.bovis_AF2122/97 --------------------------------------------------
Rv2397c|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_3715|M.marinum_M --------------------------------------------------
MUL_3658|M.ulcerans_Agy99 --------------------------------------------------
Mvan_5731|M.vanbaalenii_PYR-1 --------------------------------------------------
MAV_0058|M.avium_104 --------------------------------------------------
TH_3040|M.thermoresistible__bu --------------------------------------------------
MSMEG_4557|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_3884|M.gilvum_PYR-GCK --------------------------------------------------
MAB_0548c|M.abscessus_ATCC_199 --------------------------------------------------
MLBr_01113|M.leprae_Br4923 MTMATAPATRSCDFYCTIRRLLKQLVPQRRLSLTVITLGITGTAIGIIVP
Mb2419c|M.bovis_AF2122/97 --------------------------------------------------
Rv2397c|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_3715|M.marinum_M --------------------------------------------------
MUL_3658|M.ulcerans_Agy99 --------------------------------------------------
Mvan_5731|M.vanbaalenii_PYR-1 --------------------------------------------------
MAV_0058|M.avium_104 --------------------------------------------------
TH_3040|M.thermoresistible__bu --------------------------------------------------
MSMEG_4557|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_3884|M.gilvum_PYR-GCK --------------------------------------------------
MAB_0548c|M.abscessus_ATCC_199 --------------------------------------------------
MLBr_01113|M.leprae_Br4923 WVLGHTTDLLFNGVIGRQLPKGISKTQAVAAARTRGDNALADLLSGMNLV
Mb2419c|M.bovis_AF2122/97 --------------------------------------------------
Rv2397c|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_3715|M.marinum_M --------------------------------------------------
MUL_3658|M.ulcerans_Agy99 --------------------------------------------------
Mvan_5731|M.vanbaalenii_PYR-1 --------------------------------------------------
MAV_0058|M.avium_104 --------------------------------------------------
TH_3040|M.thermoresistible__bu --------------------------------------------------
MSMEG_4557|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_3884|M.gilvum_PYR-GCK --------------------------------------------------
MAB_0548c|M.abscessus_ATCC_199 --------------------------------------------------
MLBr_01113|M.leprae_Br4923 PGQGVDFVAVGRTLGLALSLYLVYTLLTWAQARLLNVTVQRIMFALRSDV
Mb2419c|M.bovis_AF2122/97 --------------------------------------------------
Rv2397c|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_3715|M.marinum_M --------------------------------------------------
MUL_3658|M.ulcerans_Agy99 --------------------------------------------------
Mvan_5731|M.vanbaalenii_PYR-1 --------------------------------------------------
MAV_0058|M.avium_104 --------------------------------------------------
TH_3040|M.thermoresistible__bu --------------------------------------------------
MSMEG_4557|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_3884|M.gilvum_PYR-GCK --------------------------------------------------
MAB_0548c|M.abscessus_ATCC_199 --------------------------------------------------
MLBr_01113|M.leprae_Br4923 EDKVHRLPLSYCDTRQRGELLSRVTNDIDNLQSSLSITLSQLLTSLLTVV
Mb2419c|M.bovis_AF2122/97 --------------------------------------------------
Rv2397c|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_3715|M.marinum_M --------------------------------------------------
MUL_3658|M.ulcerans_Agy99 --------------------------------------------------
Mvan_5731|M.vanbaalenii_PYR-1 --------------------------------------------------
MAV_0058|M.avium_104 --------------------------------------------------
TH_3040|M.thermoresistible__bu --------------------------------------------------
MSMEG_4557|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_3884|M.gilvum_PYR-GCK --------------------------------------------------
MAB_0548c|M.abscessus_ATCC_199 --------------------------------------------------
MLBr_01113|M.leprae_Br4923 AVLVVMVSVSPLLALVALLTVPMSLLATRAIAQRSQQLFVAQWTSAGRLN
Mb2419c|M.bovis_AF2122/97 --------------------------------------------------
Rv2397c|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_3715|M.marinum_M --------------------------------------------------
MUL_3658|M.ulcerans_Agy99 --------------------------------------------------
Mvan_5731|M.vanbaalenii_PYR-1 --------------------------------------------------
MAV_0058|M.avium_104 --------------------------------------------------
TH_3040|M.thermoresistible__bu --------------------------------------------------
MSMEG_4557|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_3884|M.gilvum_PYR-GCK --------------------------------------------------
MAB_0548c|M.abscessus_ATCC_199 --------------------------------------------------
MLBr_01113|M.leprae_Br4923 AHIEETYSGLTVVKTFGHQTAAREQFRNVNNDVYQASFSAQFFSGLVSPA
Mb2419c|M.bovis_AF2122/97 --------------------------------------------------
Rv2397c|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_3715|M.marinum_M --------------------------------------------------
MUL_3658|M.ulcerans_Agy99 --------------------------------------------------
Mvan_5731|M.vanbaalenii_PYR-1 --------------------------------------------------
MAV_0058|M.avium_104 --------------------------------------------------
TH_3040|M.thermoresistible__bu --------------------------------------------------
MSMEG_4557|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_3884|M.gilvum_PYR-GCK --------------------------------------------------
MAB_0548c|M.abscessus_ATCC_199 --------------------------------------------------
MLBr_01113|M.leprae_Br4923 TMFISNLGYVVVAALGGLQVATGHITLGNIQAFIQYVRQFNMPLSQVAGI
Mb2419c|M.bovis_AF2122/97 ---------------------------------MT-------YAIVVADA
Rv2397c|M.tuberculosis_H37Rv ---------------------------------MT-------YAIVVADA
MMAR_3715|M.marinum_M ---------------------------MKKETSLTGPGT-GGHAIVVRDA
MUL_3658|M.ulcerans_Agy99 ---------------------------------MTGPGT-GGHAIVVRDA
Mvan_5731|M.vanbaalenii_PYR-1 ---------------------------------MP-------SAVRIESA
MAV_0058|M.avium_104 ---------------------------------MSNPASRASVSLACKDI
TH_3040|M.thermoresistible__bu ------------------------------MTDVRDATATAQTAVCADRV
MSMEG_4557|M.smegmatis_MC2_155 ------------------------------------------MSLRADDV
Mflv_3884|M.gilvum_PYR-GCK ---------------------------------------MTAARLSTAGL
MAB_0548c|M.abscessus_ATCC_199 ------------------------------------------MDVTFRNV
MLBr_01113|M.leprae_Br4923 YNTLQSGLASAERVFDLLDEPEELPDPMLALPPPHGQVPRINGRVEFQQV
:
Mb2419c|M.bovis_AF2122/97 TKRY-GDFVALDHVDFVVPTGSLTALLGPSGSGKSTLLRTIAGLDQPDTG
Rv2397c|M.tuberculosis_H37Rv TKRY-GDFVALDHVDFVVPTGSLTALLGPSGSGKSTLLRTIAGLDQPDTG
MMAR_3715|M.marinum_M FKQY-GDFVALDHVDFVVPAGSLTALLGPSGSGKSTLLRTIAGLDQPDSG
MUL_3658|M.ulcerans_Agy99 FKQY-GDFVALDHVDFVVPAGSLTALLGPSGSGKSTLLRTIAGLDQPDSG
Mvan_5731|M.vanbaalenii_PYR-1 GKSY-GATVALDDVSLQIEPGQMVALLGPSGCGKTSLLRSIAGLSPLDSG
MAV_0058|M.avium_104 HQTL-NGNAVLRGVDLDTPAGSTVAVIGPSGSGKSTLLRTLNRLYEPDRG
TH_3040|M.thermoresistible__bu CWTV-RGTLIVDGVSLDVTPGSTVGLLGPNGSGKSTLLRMLAGIRRPSSG
MSMEG_4557|M.smegmatis_MC2_155 RWLR-SGRLVLADVTVAFQPGSTVGVLGPNGSGKSSLLRLLAGLDRPDAG
Mflv_3884|M.gilvum_PYR-GCK CVDL-GGRRIVEDVSMDVPAGRVVGIVGPNGCGKSTLLRTLGGILRPASG
MAB_0548c|M.abscessus_ATCC_199 SVSI-AGAQIISDIHLNVAAGGFVGIVGPNGSGKSTTLRCLYRALTPASG
MLBr_01113|M.leprae_Br4923 SFAYRTGTPVIDDLSMVVEPGSTVAIVGPTGAGKTTLVNLLMRFYDVDSG
: : . .* ..::**.*.**:: :. : *
Mb2419c|M.bovis_AF2122/97 TITINGRDVTRVPPQ--RRGIGFVFQHYAAFKHLTVRDNVAFG----LKI
Rv2397c|M.tuberculosis_H37Rv TITINGRDVTRVPPQ--RRGIGFVFQHYAAFKHLTVRDNVAFG----LKI
MMAR_3715|M.marinum_M NITINGRDVTRVPPQ--RRGIGFVFQHYAAFKHLTVRDNVAYG----LKI
MUL_3658|M.ulcerans_Agy99 NITINGRDVTRVPPQ--RRGIGFVFQHYAAFKHLTVRDNVAYG----LKI
Mvan_5731|M.vanbaalenii_PYR-1 TVRIGDVDVTHLPAR--HRPIGMVFQHYALFPNMSVAENISFP----LAI
MAV_0058|M.avium_104 DILLDGRSVLHDDPDQLRQRIGMVFQHFNLFPHRTVLDNVALAP---RKL
TH_3040|M.thermoresistible__bu VIRLHDQDVTTLARRQVARRVAVVEQESGTDSDPRVRDVIALGRIPHRRP
MSMEG_4557|M.smegmatis_MC2_155 RVELDGRPVTAMPRRALARRVALVGQHAETDLNITVGDVVRLGRIPYTTM
Mflv_3884|M.gilvum_PYR-GCK VVSIDGTDIATLGARQLARTVAAVLQDSAGDFDLRVRDVVLMGRSPYKRM
MAB_0548c|M.abscessus_ATCC_199 DVAVNGVSVRAISMRENARQVAALTQDMSLDFDFTAAEVIATGRLPHGAS
MLBr_01113|M.leprae_Br4923 QILIDGVDITTVSRHALRSRIGMVLQDAWLFDG-TIAENIAYGR-PQASE
: : . : :. : *. : :
Mb2419c|M.bovis_AF2122/97 RKRPKAEIKAKVDNLLQVVGLSGFQ--SRYPNQLSGGQRQRMALARALAV
Rv2397c|M.tuberculosis_H37Rv RKRPKAEIKAKVDNLLQVVGLSGFQ--SRYPNQLSGGQRQRMALARALAV
MMAR_3715|M.marinum_M RKRPKAEIRDKVDNLLEVVGLSGFH--GRYPNQLSGGQRQRMALARALAV
MUL_3658|M.ulcerans_Agy99 RKRPKAEIRDKVDNLLEVVGLSGFH--GRYPDQLSGGQRQRMALARALAV
Mvan_5731|M.vanbaalenii_PYR-1 RRERRAARDARVEELLALIGMSELA--DRYPNQLSGGQQQRVALARALAP
MAV_0058|M.avium_104 RRLPAEAARELALTQLDRVGLKHKA--GARPATLSGGQQQRVAIARALAM
TH_3040|M.thermoresistible__bu WAALSDRDLRIIERAAAATDVADRL--DQHYATLSGGERQRVQLSRAFAQ
MSMEG_4557|M.smegmatis_MC2_155 FGGDGD-GASAVRDALAVTGLLGMQ--NRLWHTLSGGERQRVQIARALAQ
Mflv_3884|M.gilvum_PYR-GCK FEGDNASDIRIVGDSLALVDAAHLE--DRPFPLLSGGERRRVLVARALAQ
MAB_0548c|M.abscessus_ATCC_199 LRGTSQLDRQICARATETADVTALS--GRTFGSLSGGERQRVLIARALAQ
MLBr_01113|M.leprae_Br4923 DEVMEAAKAAYVDRFVHTLSAGYQTRVSGDGDNISAGEKQLITIARAFLA
. . :*.*::: : ::**:
Mb2419c|M.bovis_AF2122/97 DPEVLLLDEPFGALDAKVREELRAWLRRLHDEVHVTTVLVTHDQAEALDV
Rv2397c|M.tuberculosis_H37Rv DPEVLLLDEPFGALDAKVREELRAWLRRLHDEVHVTTVLVTHDQAEALDV
MMAR_3715|M.marinum_M DPEVLLLDEPFGALDAKVREDLRAWLRRLHDEVHVTTVLVTHDQAEALDV
MUL_3658|M.ulcerans_Agy99 DPEVLLLDEPFGALDAKVREDLRAWLRRLHDEVHVTTVLVTHDQAEALDV
Mvan_5731|M.vanbaalenii_PYR-1 EPDVLLLDEPLAALDAAIRNDLRDEIRRIQHRVGTTAVFVTHDQSEAMAV
MAV_0058|M.avium_104 SPQVMFFDEATSALDPEMVKGILQLIADLG-AEGMTMVVVTHEMGFARSA
TH_3040|M.thermoresistible__bu EPEVLLLDEPTNHLDVRHQLDLMRMVRDAE----LTSVIAMHDLNLAAAF
MSMEG_4557|M.smegmatis_MC2_155 QPTELLLDEPTNHLDIAHQLEILALIRELD----ITVVVALHDLNLAAMF
Mflv_3884|M.gilvum_PYR-GCK QPHLLLMDEPTNHLDVRHTFDVLALPATLG----VTAVIALHDLNLAAQY
MAB_0548c|M.abscessus_ATCC_199 QPHVLVLDEPTNHLDVRHQYSILNSARALG----ITVIAALHDLNLAAQY
MLBr_01113|M.leprae_Br4923 RPQLLILDEATSSIDTRTEALIARATHDLLQDR--TSFIIAHHLP-TIRD
* :.:**. :* : * . *. :
Mb2419c|M.bovis_AF2122/97 ADRIAVLHKGRIEQVGSPTDVYDAPANAFVMSFLGAVSTLNGSLVRPHDI
Rv2397c|M.tuberculosis_H37Rv ADRIAVLHKGRIEQVGSPTDVYDAPANAFVMSFLGAVSTLNGSLVRPHDI
MMAR_3715|M.marinum_M ADRIAVLNSGRIEQVGSPTEVYDAPANAFVMSFLGAVSALNGALVRPHDI
MUL_3658|M.ulcerans_Agy99 ADRIAVLNSGRIEQVGSPTEVYDAPTNAFVMSFLGAVSALNGALVRPHDI
Mvan_5731|M.vanbaalenii_PYR-1 ADRVAVMDRGRILEVAAPAEIYERPTSRFTATFVGSRNALELPVDADRVV
MAV_0058|M.avium_104 SDAVIFMDHGKVVESGPPEQIFEAAETERLQRFLSQVL------------
TH_3040|M.thermoresistible__bu CDALLVLAHGRVVAAGPPAGVLTAELVERVYGVRARIG-HDDTG-LYVRF
MSMEG_4557|M.smegmatis_MC2_155 CDHVVVLSAGGVVASGPPADVLTEQLVADVYGVRCEIT-RDSAG-PYVRF
Mflv_3884|M.gilvum_PYR-GCK CDVIHVLRNGRQVAAGSPADVLTADLLGDVWEVRATVQPHPDTGRPHIYF
MAB_0548c|M.abscessus_ATCC_199 CDTIHVMADGNVVLSGSPHEVLTAESVGRWFGIDCHVITHPRSGVPQVIF
MLBr_01113|M.leprae_Br4923 ADHILVVAAGKIVEQGSHAKLLARRGAYYRMTQA----------------
.* : .: * .. :
Mb2419c|M.bovis_AF2122/97 RVGRTPNMAVAAADGTAGSTGVLRAVVDRVVVLGFEVRVELTSAATGGAF
Rv2397c|M.tuberculosis_H37Rv RVGRTPNMAVAAADGTAGSTGVLRAVVDRVVVLGFEVRVELTSAATGGAF
MMAR_3715|M.marinum_M RVGRTPEMAVAAADGTGESTGVTRAVVDRIVVLGFEVRVELTSAATGGAF
MUL_3658|M.ulcerans_Agy99 RVGRTPEMAVAAADGTGESTGVTRAVVDRIVVLGFEVRVELTSAATGGAF
Mvan_5731|M.vanbaalenii_PYR-1 RWGQAFEVPAPTAAN-GKALAVFRPE---------DVRITGRDGLPGTVD
MAV_0058|M.avium_104 --------------------------------------------------
TH_3040|M.thermoresistible__bu LG------------------------------------------------
MSMEG_4557|M.smegmatis_MC2_155 RPGGRTGGR-----------------------------------------
Mflv_3884|M.gilvum_PYR-GCK DPRRRVTEESRSG-------------------------------------
MAB_0548c|M.abscessus_ATCC_199 YAEPERQEKQ----------------------------------------
MLBr_01113|M.leprae_Br4923 --------------------------------------------------
Mb2419c|M.bovis_AF2122/97 TAQITRGDAEALALREGDTVYVRATRVPPIAGGVSGVDDAGVERVKVTST
Rv2397c|M.tuberculosis_H37Rv TAQITRGDAEALALREGDTVYVRATRVPPIAGGVSGVDDAGVERVKVTST
MMAR_3715|M.marinum_M TAQITRGDAEALALQEGDTVYVRATRVPPIAGAAPAVPDDGAGSTPSAAQ
MUL_3658|M.ulcerans_Agy99 TAQITRGDAEALALQEGDTVYVRATRVPPIAGAAPAVPDDGAGSTPRAAQ
Mvan_5731|M.vanbaalenii_PYR-1 VVLFLGATSRIYLTVDGHTVHADL----PSRAAAEYRPGQHVGVTVAADD
MAV_0058|M.avium_104 --------------------------------------------------
TH_3040|M.thermoresistible__bu --------------------------------------------------
MSMEG_4557|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_3884|M.gilvum_PYR-GCK --------------------------------------------------
MAB_0548c|M.abscessus_ATCC_199 --------------------------------------------------
MLBr_01113|M.leprae_Br4923 --------------------------------------------------
Mb2419c|M.bovis_AF2122/97 ------
Rv2397c|M.tuberculosis_H37Rv ------
MMAR_3715|M.marinum_M IGVGGQ
MUL_3658|M.ulcerans_Agy99 IGVGGQ
Mvan_5731|M.vanbaalenii_PYR-1 VRVFAS
MAV_0058|M.avium_104 ------
TH_3040|M.thermoresistible__bu ------
MSMEG_4557|M.smegmatis_MC2_155 ------
Mflv_3884|M.gilvum_PYR-GCK ------
MAB_0548c|M.abscessus_ATCC_199 ------
MLBr_01113|M.leprae_Br4923 ------