For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. thermoresistible (build 8) | TH_2804 | - | - | 100% (70) | - |
M. thermoresistible (build 8) | TH_0173 | - | 7e-07 | 61.76% (34) | CONSERVED HYPOTHETICAL PROTEIN |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0379c | - | 1e-12 | 75.00% (44) | hypothetical protein Mb0379c |
M. gilvum PYR-GCK | Mflv_1574 | - | 2e-07 | 60.00% (40) | hypothetical protein Mflv_1574 |
M. tuberculosis H37Rv | Rv0372c | - | 1e-12 | 75.00% (44) | hypothetical protein Rv0372c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2924c | - | 9e-06 | 48.78% (41) | hypothetical protein MAB_2924c |
M. marinum M | MMAR_0658 | - | 3e-12 | 58.93% (56) | hypothetical protein MMAR_0658 |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | MSMEG_0747 | - | 7e-12 | 71.11% (45) | carbon monoxide dehydrogenase F protein |
M. ulcerans Agy99 | MUL_0114 | - | 7e-10 | 77.14% (35) | hypothetical protein MUL_0114 |
M. vanbaalenii PYR-1 | Mvan_5182 | - | 1e-07 | 62.50% (40) | hypothetical protein Mvan_5182 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_0658|M.marinum_M ------MTISERAAQLLAARTPFVHATVVRAQPPTSAYPGDEAILLPDGT MUL_0114|M.ulcerans_Agy99 ----MQMTISERAAQLLAARTPFVHATVVRAQPPTSAYPGDEAILLPDGT Mb0379c|M.bovis_AF2122/97 ------MSISDRAAQLVAARTPFVRATVVRAQQPTSARPGDEAILLADGT Rv0372c|M.tuberculosis_H37Rv ------MSISDRAAQLVAARTPFVRATVVRAQQPTSARPGDEAILLADGT MSMEG_0747|M.smegmatis_MC2_155 MTPMTPMRLHDRVTELRRARTPFVHATVVRAQQPTSAHPGDEAILLPDGT TH_2804|M.thermoresistible__bu -------------------------------------------------- Mflv_1574|M.gilvum_PYR-GCK ---------------MWEAGGTAGLSTVVRTMKSAPRPPGAAMVVSPDGT Mvan_5182|M.vanbaalenii_PYR-1 -----MRDVLDELLAVWRSGETAGLSTVVRTMQSAPRPPGAAMVVGPDGA MAB_2924c|M.abscessus_ATCC_199 -----MKDILRDLIAVLEGGGTAALARVVEVSGAVPREPGAAMIVPADGP MMAR_0658|M.marinum_M IEGFVGGQCAQNSVRKAALGVLQAGESVLLRVLPDGDVHFPEAPGACVVV MUL_0114|M.ulcerans_Agy99 IEGFVGGQCAQNSVRKAALGVLQAGESVLLRVLPDGDVHFPEAPGACVVV Mb0379c|M.bovis_AF2122/97 IEGFVGGHCAQNSVRKAAMGVLQAGESVLLRVLPDGDVHFPEAPGACVVV Rv0372c|M.tuberculosis_H37Rv IEGFVGGHCAQNSVRKAAMGVLQAGESVLLRVLPDGDVHFPEAPGACVVV MSMEG_0747|M.smegmatis_MC2_155 IEGFVGGHCAQNSVRQAALGALQVGQSVLLRVLPDGDVSFPETPGACVVV TH_2804|M.thermoresistible__bu -------------------------------------------------- Mflv_1574|M.gilvum_PYR-GCK VAGSVSGGCVEGAVYETANEVITGGAPHLQRYGVSDDDAFSVGLTCGGII Mvan_5182|M.vanbaalenii_PYR-1 VAGSVSGGCVEAAVYEVANDVVASGVPELQRYGISDDDAFTVGLTCGGTI MAB_2924c|M.abscessus_ATCC_199 VVGSLSGGCVEAAVIETAREVLAIGLCVSERFGI--DDGIAPGLTCGGEI MMAR_0658|M.marinum_M NPCLS--------------------------------------------- MUL_0114|M.ulcerans_Agy99 NPCLS--------------------------------------------- Mb0379c|M.bovis_AF2122/97 NPCLA--------------------------------------------- Rv0372c|M.tuberculosis_H37Rv NPCLA--------------------------------------------- MSMEG_0747|M.smegmatis_MC2_155 NHCLS--------------------------------------------- TH_2804|M.thermoresistible__bu -------------------------------------------------- Mflv_1574|M.gilvum_PYR-GCK DIFTEPVSRNTFPQLRDVATAIAEHRAVAVATVIAHPDPARVGRRIIVGT Mvan_5182|M.vanbaalenii_PYR-1 DVFTEPVSRETFPQLQQVADDIAAHRPVAVATVIVHPDPKRVGLRLVVGR MAB_2924c|M.abscessus_ATCC_199 EVVTEHIGAERFPLLRELRSALVAGEPMGLVSTLSG-----IPDWALVR- MMAR_0658|M.marinum_M -----------------------------------------GGSLEIFLT MUL_0114|M.ulcerans_Agy99 -----------------------------------------GGSLEIFLT Mb0379c|M.bovis_AF2122/97 -----------------------------------------GGSLEIFLT Rv0372c|M.tuberculosis_H37Rv -----------------------------------------GGSLEIFLT MSMEG_0747|M.smegmatis_MC2_155 -----------------------------------------GGALEIFLD TH_2804|M.thermoresistible__bu -------------------------------------------------- Mflv_1574|M.gilvum_PYR-GCK DSRQGSVGSPRADDAVADDARGLLLAGRSAVLSYGPDGQRQDAGMEVFVS Mvan_5182|M.vanbaalenii_PYR-1 DSRHGSLGSSRTDDAVTDDARGLLLAGRSGVLTYGADGQRQESGMEVFVC MAB_2924c|M.abscessus_ATCC_199 ------AGEPAPWPQIEGDIVSLIRAGRSAVAGADRCEPDQSDLPRVFVQ MMAR_0658|M.marinum_M PQLPAPLVRIYGATPIAEALIEVCGVLGY-------------DARRDSDP MUL_0114|M.ulcerans_Agy99 PQLPAPLVRIYGATPIAEALIEVCGVLGY-------------DARRDSDP Mb0379c|M.bovis_AF2122/97 PQLPAPLIQIYGETPIADALIELCGLLGY-------------DARRDTDP Rv0372c|M.tuberculosis_H37Rv PQLPAPLIQIYGETPIADALIELCGLLGY-------------DARRDTDP MSMEG_0747|M.smegmatis_MC2_155 PQVPAPLVGVFGGSPIADALVEVTAVLGY-------------DVRR-LDA TH_2804|M.thermoresistible__bu -------------------------------------------------- Mflv_1574|M.gilvum_PYR-GCK SYAPRPRMLVFGAIDFAAALAHQAAFLGYRVTVCDARPVFATEARFPAAE Mvan_5182|M.vanbaalenii_PYR-1 SHAPRPKMLVFGAIDFASALARQATFLGYRVTVCDARPVFATAARFPAAE MAB_2924c|M.abscessus_ATCC_199 AFAAPPRMILAGANAFVRALSRTGSQLGYRVTVVDAREVFATPAHFPYAD MMAR_0658|M.marinum_M VGAAALP--TAVVIASHGGPEAENIRAALDNG------------------ MUL_0114|M.ulcerans_Agy99 VGAAALP--TAVVIASHGGPEAENIRAALDNG------------------ Mb0379c|M.bovis_AF2122/97 ADTDALP--TAIVIASHSGPEAEIIRTALDNG------------------ Rv0372c|M.tuberculosis_H37Rv ADTDALP--TAIVIASHGGPEAEIIRTALDNG------------------ MSMEG_0747|M.smegmatis_MC2_155 PDPSALDGASALVIASLGGPEADLIRAALDAG------------------ TH_2804|M.thermoresistible__bu -------------------------------------------------- Mflv_1574|M.gilvum_PYR-GCK EVVVDWPHRYLAAQADLGLIDARTAICVLTHDPKFDVPVLEVALRLPDAG Mvan_5182|M.vanbaalenii_PYR-1 EVVVDWPDRYLRAQAEQGEIDSRTAVCVLTHDPKFDVPVLEVALRLPELD MAB_2924c|M.abscessus_ATCC_199 EVVVDWPHRYLRAEAAGGRVDARTVVCVLTHDPKFDVPMLAAALTVAPVA MMAR_0658|M.marinum_M -VGYIGLVASKVRGAAVLDSLGLSATERARIRTPVGLAIGAKTPAEIAVA MUL_0114|M.ulcerans_Agy99 -VGYIGLVASKVRGAAVLDSLGLSATERARIRTPVGLAIGAKTPAEIAVA Mb0379c|M.bovis_AF2122/97 -VGYVGLVASTVRGASILDSLDLSDAERARVHTPVGLAIGAKTPAEIAVS Rv0372c|M.tuberculosis_H37Rv -VGYVGLVASTVRGASILDSLDLSDAERARVHTPVGLAIGAKTPAEIAVS MSMEG_0747|M.smegmatis_MC2_155 -IGYIGLVASRRRGSAILDGLNLTESERARMHTPVGLDIGARTPAEIAVS TH_2804|M.thermoresistible__bu ----------------VLAEVQPTDCERARVHTPVGLPIGARTPAEIAVS Mflv_1574|M.gilvum_PYR-GCK YIGVMGSRRTHEDRMSRLREAGLTETELARLASPIGLDLGARTPEETAVS Mvan_5182|M.vanbaalenii_PYR-1 YIGVMGSRRTHHDRVRRLREAGLTDKELARLSSPIGLDLGARTPEETAVS MAB_2924c|M.abscessus_ATCC_199 FVGALGSRRTHTDRMARLREQGVTDDQLGRLRSPLGLDLNARTPEETAIS * : : .*: :*:** :.*:** * *:: MMAR_0658|M.marinum_M IAAEIIAAVRAGGGGRPAPVDATAAEAVDPVCGMTVLIGPATEHLRLAGA MUL_0114|M.ulcerans_Agy99 IAAEIIAAVRAGGG---------------------------------AGP Mb0379c|M.bovis_AF2122/97 IAAELIATLR-GGG------------------------------------ Rv0372c|M.tuberculosis_H37Rv IAAELIATLR-GGG------------------------------------ MSMEG_0747|M.smegmatis_MC2_155 IAAEVIATVRAHGR------------------------------------ TH_2804|M.thermoresistible__bu IAAELIADLRAREHPAP--------------------------------- Mflv_1574|M.gilvum_PYR-GCK IAAEIIARRWGGGG------------------------------------ Mvan_5182|M.vanbaalenii_PYR-1 IAAEIIARRWGGDG------------------------------------ MAB_2924c|M.abscessus_ATCC_199 IAAQIIAETSGGSG------------------------------------ ***::** MMAR_0658|M.marinum_M DYWFCCPACRTAFSDRNGGA-- MUL_0114|M.ulcerans_Agy99 RRWMRLPPRR---WTRCAG--- Mb0379c|M.bovis_AF2122/97 ------PRGRKALADENGGA-- Rv0372c|M.tuberculosis_H37Rv ------PRGRKALADENGGA-- MSMEG_0747|M.smegmatis_MC2_155 ---------------------- TH_2804|M.thermoresistible__bu ----PEPDRPSASAAEPGCHAH Mflv_1574|M.gilvum_PYR-GCK -----RPLTETDGRIHHEA--- Mvan_5182|M.vanbaalenii_PYR-1 -----RPLSQTDGRIHHPA--- MAB_2924c|M.abscessus_ATCC_199 -----RPLSDIDGPIHR-----