For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VRDVLDELLAVWRSGETAGLSTVVRTMQSAPRPPGAAMVVGPDGAVAGSVSGGCVEAAVYEVANDVVASG VPELQRYGISDDDAFTVGLTCGGTIDVFTEPVSRETFPQLQQVADDIAAHRPVAVATVIVHPDPKRVGLR LVVGRDSRHGSLGSSRTDDAVTDDARGLLLAGRSGVLTYGADGQRQESGMEVFVCSHAPRPKMLVFGAID FASALARQATFLGYRVTVCDARPVFATAARFPAAEEVVVDWPDRYLRAQAEQGEIDSRTAVCVLTHDPKF DVPVLEVALRLPELDYIGVMGSRRTHHDRVRRLREAGLTDKELARLSSPIGLDLGARTPEETAVSIAAEI IARRWGGDGRPLSQTDGRIHHPA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_5182 | - | - | 100% (373) | hypothetical protein Mvan_5182 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0383c | - | 1e-154 | 72.83% (368) | hypothetical protein Mb0383c |
| M. gilvum PYR-GCK | Mflv_1574 | - | 1e-172 | 81.27% (363) | hypothetical protein Mflv_1574 |
| M. tuberculosis H37Rv | Rv0376c | - | 1e-154 | 72.83% (368) | hypothetical protein Rv0376c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2924c | - | 5e-92 | 50.40% (371) | hypothetical protein MAB_2924c |
| M. marinum M | MMAR_0654 | - | 1e-157 | 72.92% (373) | hypothetical protein MMAR_0654 |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_0743 | - | 1e-164 | 76.55% (371) | xanthine dehydrogenase |
| M. thermoresistible (build 8) | TH_0173 | - | 1e-159 | 75.00% (372) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_0114 | - | 3e-11 | 28.15% (270) | hypothetical protein MUL_0114 |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_5182|M.vanbaalenii_PYR-1 ----MRDVLDELLAVWRSGETAGLSTVVRTMQSAPRPPGAAMVVGPDGAV
Mflv_1574|M.gilvum_PYR-GCK --------------MWEAGGTAGLSTVVRTMKSAPRPPGAAMVVSPDGTV
MSMEG_0743|M.smegmatis_MC2_155 MLGGVRDVLGTLSAVWESGGTAGVGTVVRTFRSAPRPAGASMVVAPDGTV
TH_0173|M.thermoresistible__bu -------VLDGLLPVWRSGDTAGLATVVRTFRSAPRLPGAAMVVAPDGTV
Mb0383c|M.bovis_AF2122/97 ------------MAIWAAGDTAGVATVVRTLRSAPRPPGAAMVVAPDGSV
Rv0376c|M.tuberculosis_H37Rv ------------MAIWAAGDTAGVATVVRTLRSAPRPPGAAMVVAPDGSV
MMAR_0654|M.marinum_M ----MRDVLTDLITIWRAGDTAGLATVVRTLRSAPRPPGASMVVAPDGSV
MAB_2924c|M.abscessus_ATCC_199 ----MKDILRDLIAVLEGGGTAALARVVEVSGAVPREPGAAMIVPADGPV
MUL_0114|M.ulcerans_Agy99 ---MQMTISERAAQLLAARTPFVHATVVRAQPPTSAYPGDEAILLPDGTI
: . . . **.. ... .* :: .**.:
Mvan_5182|M.vanbaalenii_PYR-1 AGSVSGGCVEAAVYEVANDVVASGVPELQRYGISDDDAFTVGLTCGGTID
Mflv_1574|M.gilvum_PYR-GCK AGSVSGGCVEGAVYETANEVITGGAPHLQRYGVSDDDAFSVGLTCGGIID
MSMEG_0743|M.smegmatis_MC2_155 SGSVSGGCVEGAVYDLATEVVATGTPVLQRYGVSDDDAFEVGLTCGGILD
TH_0173|M.thermoresistible__bu SGSVSGGCVEGAVYELATEVIQTGRPRLQRYGVSDDDAFSVGLTCGGTLD
Mb0383c|M.bovis_AF2122/97 SGSVSGGCVEGAVYELAAEVAQTGIPRLEHYGVSDDTAFAVGLTCGGIID
Rv0376c|M.tuberculosis_H37Rv SGSVSGGCVEGAVYELAAEVAQTGIPRLEHYGVSDDTAFAVGLTCGGIID
MMAR_0654|M.marinum_M SGSVSGGCVEGAVYESAGEVTRTGIPRLERYGVSDDDAFAVGLTCGGIID
MAB_2924c|M.abscessus_ATCC_199 VGSLSGGCVEAAVIETAREVLAIGLCVSERFGIDDG--IAPGLTCGGEIE
MUL_0114|M.ulcerans_Agy99 EGFVGGQCAQNSVRKAALGVLQAGESVLLRVLPDGDVHFPEAPGACVVVN
* :.* *.: :* . * * * : ... : . . ::
Mvan_5182|M.vanbaalenii_PYR-1 VFTEPVSRETFPQLQQVADDIAAHRPVAVATVIVHPDPKRVGLRLVVGRD
Mflv_1574|M.gilvum_PYR-GCK IFTEPVSRNTFPQLRDVATAIAEHRAVAVATVIAHPDPARVGRRIIVGTD
MSMEG_0743|M.smegmatis_MC2_155 VFVEPVSQKTFPQLGAIRDDIEAQRPVAVATVITHPDAQWIGRRLVVHTD
TH_0173|M.thermoresistible__bu VFVEAVSQNSFPELADLVGDIEAHRPVATATVIAHSDPGWVGRRLVLRPD
Mb0383c|M.bovis_AF2122/97 VFVEPVSRATFPELGELADDIGAQRPVAIATVIAHPDERRVGRRLVIRPD
Rv0376c|M.tuberculosis_H37Rv VFVEPVSRATFPELGELADDIGAQRPVAIATVIAHPDERRVGRRLVIRPD
MMAR_0654|M.marinum_M IFIEAVSPATFPELVAVAEDIAAHVPVAVATVIAHPDPQWVGRRLVVRTD
MAB_2924c|M.abscessus_ATCC_199 VVTEHIGAERFPLLRELRSALVAGEPMGLVSTLSG-----IPDWALVR--
MUL_0114|M.ulcerans_Agy99 PCLS----------------------------------------------
.
Mvan_5182|M.vanbaalenii_PYR-1 SR----HGSLGSSRTDDAVTDDARGLLLAGRSGVLTYGADGQRQESGMEV
Mflv_1574|M.gilvum_PYR-GCK SR----QGSVGSPRADDAVADDARGLLLAGRSAVLSYGPDGQRQDAGMEV
MSMEG_0743|M.smegmatis_MC2_155 ----EVAGSLGSSRADAAVTDDARGLLAAGRSEVLTYGPDGQRRGEGMEV
TH_0173|M.thermoresistible__bu HEDAPVSGSLGSPRADAAVTDDARGLLAAGRTEVLTYGPDGQRRGEGMEV
Mb0383c|M.bovis_AF2122/97 TK-SPVTGSLGSARADAAVIDDARGLLAVGRSEILEYGPDGQRRGEGMEV
Rv0376c|M.tuberculosis_H37Rv TK-SPVTGSLGSARADAAVIDDARGLLAVGRSEILEYGPDGQRRGEGMEV
MMAR_0654|M.marinum_M PS-RPTAGSLGSVRADAAVTDDARGLLALGRSEILKYGPDGQRRGEGMEI
MAB_2924c|M.abscessus_ATCC_199 ---------AGEPAPWPQIEGDIVSLIRAGRSAVAGADRCEPDQSDLPRV
MUL_0114|M.ulcerans_Agy99 --------------------------------------------GGSLEI
.:
Mvan_5182|M.vanbaalenii_PYR-1 FVCSHAPRPKMLVFGAIDFASALARQATFLGYRVTVCDARPVFATAARFP
Mflv_1574|M.gilvum_PYR-GCK FVSSYAPRPRMLVFGAIDFAAALAHQAAFLGYRVTVCDARPVFATEARFP
MSMEG_0743|M.smegmatis_MC2_155 FVSSYAPRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVFATTARFP
TH_0173|M.thermoresistible__bu FVASYAPRPRMLVFGAIDFAAAVAQQASFLGYRVTVCDARAVFATPARFP
Mb0383c|M.bovis_AF2122/97 FVSSHAPRPRMLVFGAIDFAAALARQGSFLGYRVTVCDARAVFATPARFP
Rv0376c|M.tuberculosis_H37Rv FVSSHAPRPRMLVFGAIDFAAALARQGSFLGYRVTVCDARAVFATPARFP
MMAR_0654|M.marinum_M FVSSFAPRPRMLVFGAIDFAAALARQGSFLGYRVTVCDARAVFATRARFP
MAB_2924c|M.abscessus_ATCC_199 FVQAFAAPPRMILAGANAFVRALSRTGSQLGYRVTVVDAREVFATPAHFP
MUL_0114|M.ulcerans_Agy99 FLTPQLPAPLVRIYGATPIAEALIEVCGVLGY-----DARRDSDPVGAAA
*: . . * : : ** :. *: . *** *** . . .
Mvan_5182|M.vanbaalenii_PYR-1 AAEEVVVDWPDRYLRAQAEQGEIDSRTAVCVLTHDPKFDVPVLEVALRLP
Mflv_1574|M.gilvum_PYR-GCK AAEEVVVDWPHRYLAAQADLGLIDARTAICVLTHDPKFDVPVLEVALRLP
MSMEG_0743|M.smegmatis_MC2_155 TADEVVVDWPHRYLAAQAEAGAIDARTVVCVLTHDPKFDVPLLEVALRLP
TH_0173|M.thermoresistible__bu TADEVVVEWPHRYLAAQAEAGAVDSRTAICVLTHDPKFDVPLLEVALRLP
Mb0383c|M.bovis_AF2122/97 TADDVVVAWPHRYLAAQAEAGGIDERTVICVLTHDPKFDVPVLEVALRLG
Rv0376c|M.tuberculosis_H37Rv TADDVVVAWPHRYLAAQAEAGGIDERTVICVLTHDPKFDVPVLEVALRLG
MMAR_0654|M.marinum_M TADEVVVEWPSRYLAAEVQAGAIDERTVICVLTHDPKFDVPVLEVALRLP
MAB_2924c|M.abscessus_ATCC_199 YADEVVVDWPHRYLRAEAAGGRVDARTVVCVLTHDPKFDVPMLAAALTVA
MUL_0114|M.ulcerans_Agy99 LPTAVVIAS----------HGGPEAENIRAALDNG---------------
. **: * : .. ..* :.
Mvan_5182|M.vanbaalenii_PYR-1 ELDYIGVMGSRRTHHDRVRRLREAGLTDKELARLSSPIGLDLGARTPEET
Mflv_1574|M.gilvum_PYR-GCK DAGYIGVMGSRRTHEDRMSRLREAGLTETELARLASPIGLDLGARTPEET
MSMEG_0743|M.smegmatis_MC2_155 DIAYIGAMGSRRTHEDRLARLREAGLTEEELARLSSPIGLDLGGRTPEET
TH_0173|M.thermoresistible__bu EVGYIGAMGSRRTHEDRLERLRQAGLTDVELSRLSSPIGLDLGGRTPEET
Mb0383c|M.bovis_AF2122/97 -VGYVGAMGSRKTHDDRMDRLRAAGLTDAELSRLSSPIGLDLGARTPEET
Rv0376c|M.tuberculosis_H37Rv -VGYVGAMGSRKTHDDRMDRLRAAGLTDAELSRLSSPIGLDLGARTPEET
MMAR_0654|M.marinum_M RIGYVGAMGSRQTHDDRMSRLRAAGLTDAELSQLSSPIGLDLGARTPEET
MAB_2924c|M.abscessus_ATCC_199 PVAFVGALGSRRTHTDRMARLREQGVTDDQLGRLRSPLGLDLNARTPEET
MUL_0114|M.ulcerans_Agy99 -VGYIGLVASKVRGAAVLDSLG---LSATERARIRTPVGLAIGAKTPAEI
::* :.*: : * :: : .:: :*:** :..:** *
Mvan_5182|M.vanbaalenii_PYR-1 AVSIAAEIIARRWGGDGRPLSQTDGRIHHPA-----------------
Mflv_1574|M.gilvum_PYR-GCK AVSIAAEIIARRWGGGGRPLTETDGRIHHEA-----------------
MSMEG_0743|M.smegmatis_MC2_155 AVSIAAEIIAKRWGGEGRPLAETGGRIHH---ELGEHESAPAS-----
TH_0173|M.thermoresistible__bu AVSIAAEIIARQWGGTGRPLSETGGRIHHGGDPMKDHTSELSDPLSRY
Mb0383c|M.bovis_AF2122/97 AVSIAADIIARRWGGGGRPLADIAGRIHHDAQVAGEFKDYLTRH----
Rv0376c|M.tuberculosis_H37Rv AVSIAADIIARRWGGGGRPLADIAGRIHHDAQVAGEFKDYLTRH----
MMAR_0654|M.marinum_M AVSIAADIIARRWGGGGRPLAETSGRIHRDLQVADDFEASAG------
MAB_2924c|M.abscessus_ATCC_199 AISIAAQIIAETSGGSGRPLSDIDGPIHR-------------------
MUL_0114|M.ulcerans_Agy99 AVAIAAEIIAAVRAGGGAGPRRWMRLPPRRWTRCAG------------
*::***:*** .* * :