For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0959 | - | - | 100% (227) | phosphoglycolate phosphatase, chromosomal |
| M. thermoresistible (build 8) | TH_3247 | - | 3e-07 | 35.42% (96) | PUTATIVE putative Haloacid dehalogenase domain protein |
| M. thermoresistible (build 8) | TH_2142 | - | 6e-07 | 34.26% (108) | PROBABLE HYDROLASE |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3433 | - | 3e-09 | 36.08% (97) | hydrolase |
| M. gilvum PYR-GCK | Mflv_3054 | - | 1e-66 | 58.33% (216) | HAD family hydrolase |
| M. tuberculosis H37Rv | Rv3400 | - | 3e-09 | 36.08% (97) | hydrolase |
| M. leprae Br4923 | MLBr_00393 | - | 3e-07 | 36.78% (87) | putative hydrolase |
| M. abscessus ATCC 19977 | MAB_2130 | - | 3e-73 | 62.62% (214) | putative hydrolase |
| M. marinum M | MMAR_1144 | - | 1e-07 | 26.29% (194) | hydrolase |
| M. avium 104 | MAV_1053 | - | 9e-07 | 34.15% (123) | hypothetical protein MAV_1053 |
| M. smegmatis MC2 155 | MSMEG_4183 | - | 4e-82 | 68.25% (211) | phosphoglycolate phosphatase, chromosomal |
| M. ulcerans Agy99 | MUL_0545 | - | 4e-06 | 27.54% (167) | hydrolase |
| M. vanbaalenii PYR-1 | Mvan_3473 | - | 4e-70 | 62.56% (211) | HAD family hydrolase |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3433|M.bovis_AF2122/97 MANWYRPNYPEVRSRVLGLPEKVRACLFDLDGVLTDTASLHTKAWKAMFD
Rv3400|M.tuberculosis_H37Rv MANWYRPNYPEVRSRVLGLPEKVRACLFDLDGVLTDTASLHTKAWKAMFD
MMAR_1144|M.marinum_M ---------------MLGLPEKVRACLFDLDGVLTDTASVHTKAWKAMFD
MLBr_00393|M.leprae_Br4923 MANWDHP-TSKVRSTVLGLPEQVRACLFDLDGVLTDTASVHAKAWQTMFD
TH_0959|M.thermoresistible__bu -----------------------------MDGTLVDSE--------RLWD
MSMEG_4183|M.smegmatis_MC2_155 ----------------------MLAVLWDMDGTLVDSE--------KLWD
MAB_2130|M.abscessus_ATCC_1997 ----------------------MRAVLWDMDGTLIESE--------KLWD
Mflv_3054|M.gilvum_PYR-GCK -------------------------MLWDMDGTLVDSE--------KLWD
Mvan_3473|M.vanbaalenii_PYR-1 ------MLRGSRRDTAACQNGRVRAVLWDMDGTLVDSE--------KLWD
MUL_0545|M.ulcerans_Agy99 -----------------MPELHAAALLFDVDGTLVDST--------AVVE
MAV_1053|M.avium_104 ------MKPEGLTMVREFDPAPITTLLCDADDNLFPSERPAFAASVEVIN
*. * : : :
Mb3433|M.bovis_AF2122/97 AYLAER---AERTGEKFVPFDPAADYHTYVDGKKREDGVRSFLSSRAIEI
Rv3400|M.tuberculosis_H37Rv AYLAER---AERTGEKFVPFDPAADYHTYVDGKKREDGVRSFLSSRAIEI
MMAR_1144|M.marinum_M AYLSER---AERTGGQFVPFDPAADYRQYVDGKKREDGVRSFLSSRGIQL
MLBr_00393|M.leprae_Br4923 TYLYQR---AKHTGENFVPFDPTADYRQYVDGKKREDGVRSFLGSRGITL
TH_0959|M.thermoresistible__bu LSLREL---YRRLGRELRP-----EVRAATVGGAADTVMRIVYDDLGLDP
MSMEG_4183|M.smegmatis_MC2_155 ISMHAL---YARMGAVLTP-----EVRESTVGGSSETVMRIVYEDIGLEP
MAB_2130|M.abscessus_ATCC_1997 ISMGEL---CRKLGGEMTP-----ELRTALVGGAADATMRMIFTALELEP
Mflv_3054|M.gilvum_PYR-GCK VSLSKL---YETYDAEMSR-----ETRTALVGASAEETMVTVYTELGLDL
Mvan_3473|M.vanbaalenii_PYR-1 VSLSAL---YETFGGVMSR-----ETRATLVGASAEETMVTVYTELGLDL
MUL_0545|M.ulcerans_Agy99 ATWGAF---AELHSLDLAE------VLAFAHGRPTAATVRHFLS------
MAV_1053|M.avium_104 RFLARFGVAAPFTAEQLRKQAVGKNFRSTALDLAVASGVPIDQTLAQGRP
: . :
Mb3433|M.bovis_AF2122/97 PDGSPDDPGAAETVYGLGNRKNDMLHKLLRDDGAQVFDGSR---RYLEAV
Rv3400|M.tuberculosis_H37Rv PDGSPDDPGAAETVYGLGNRKNDMLHKLLRDDGAQVFDGSR---RYLEAV
MMAR_1144|M.marinum_M PDGSPDDPGDLETVYGLGNRKNDMFQKVLKKDGVDVFEGSR---RYLEAV
MLBr_00393|M.leprae_Br4923 PEGSADNSGDVETIYGLGNRKDDLFRQVLKEHGIEVFDGSR---RYLEAI
TH_0959|M.thermoresistible__bu -----DPEAMARTADWLHDYTGELF-----ASGLPWCAGAR---ELLDEL
MSMEG_4183|M.smegmatis_MC2_155 -----DPAAMAESADWLHAYTGELF-----EQGLPWRPGAQ---EMLDAL
MAB_2130|M.abscessus_ATCC_1997 -----DPVRMASENDWLHQYTGELF-----ATGLIWCDGAQ---EMLGQL
Mflv_3054|M.gilvum_PYR-GCK -----DPAAMAESIRWLHAHTAELF-----DEGLPWCDGAF---ELLERL
Mvan_3473|M.vanbaalenii_PYR-1 -----DPEAMAESVRWLHDHTAELF-----DGGLPWCDGAR---EMLEGL
MUL_0545|M.ulcerans_Agy99 -----HPALVASETRRLVEHEESTT------EGVREVPGAA---EFIAAL
MAV_1053|M.avium_104 EAVVASADDTAADRALCADELEQWVLQEREQVTAHLAATLRPDPEVLAPL
. . : :
Mb3433|M.bovis_AF2122/97 TAAGLGVAVVSSSANTRDVLA----TTGLDRFVQQRVDGVTLR-EEHIAG
Rv3400|M.tuberculosis_H37Rv TAAGLGVAVVSSSANTRDVLA----TTGLDRFVQQRVDGVTLR-EEHIAG
MMAR_1144|M.marinum_M SAAGLSIAVVSSSANTRDVLE----ITGLGRFIQQRVDGVRLR-EEHIAG
MLBr_00393|M.leprae_Br4923 TYAGLGVAVVSSSTNTRDVLK----ITGLDRFVQQQVDGITLR-EEHIAG
TH_0959|M.thermoresistible__bu AAAAVPMALVT---NTRRTLT----EQALHSIGRHYFAVTVCG-DEVPNG
MSMEG_4183|M.smegmatis_MC2_155 VAAEVPMALVT---NTRRDLA----ERALNSIGRHYFSVSVCG-DEVPSG
MAB_2130|M.abscessus_ATCC_1997 AAEQMPMALVT---NTIRSLT----DQALKTIGTHWFTESVCG-DEVPAG
Mflv_3054|M.gilvum_PYR-GCK VAEGTPMALVT---NTNRHLA----DRALESIGRHYFSFTVCG-DEVPRG
Mvan_3473|M.vanbaalenii_PYR-1 AAERTPAALVT---NTQRGLT----ERALNSIGRHYFSVTVCA-DEVASG
MUL_0545|M.ulcerans_Agy99 PRSAWAVVT-----SASRVLA----SNRMRAAGIPLPDVLISA-DDITRG
MAV_1053|M.avium_104 QDLASRYALAAVSSSALKRLAGCFSATGLDPLIPASVRFSAEDSLPVPTS
. .: * : .
Mb3433|M.bovis_AF2122/97 KPAPDSFLRAAELLGVTPDAAAVFEDALSGVAAGRAGNFAVVVG------
Rv3400|M.tuberculosis_H37Rv KPAPDSFLRAAELLGVTPDAAAVFEDALSGVAAGRAGNFAVVVG------
MMAR_1144|M.marinum_M KPAPDSYLRGAQLLDTAPDAAAVFEDAISGVQAGRAGNFGYVVG------
MLBr_00393|M.leprae_Br4923 KPAPDSYLRGAQLLDVAPDAAAVFEDALSGVQAGLSGHFGFVVG------
TH_0959|M.thermoresistible__bu KPAPDIYHRAADLLGVAPEACLAVEDSPTGAAAAEGAGCPVLVVPNALE-
MSMEG_4183|M.smegmatis_MC2_155 KPAPDPYLRAAELLGVPVARCLAVEDSVTGTTAAEAAGCPVLVIPNDVA-
MAB_2130|M.abscessus_ATCC_1997 KPAPDPYLRAAALLGVEPRDCLAIEDSVTGAAAAEAAGCAVLVVPNHVE-
Mflv_3054|M.gilvum_PYR-GCK KPAPDPYLRAAELLALDPSDCLAVEDSVTGTAAAERAGCAVLVVPNDVP-
Mvan_3473|M.vanbaalenii_PYR-1 KPAPDPYLRAAELLGVDPADCLAVEDSVTGTAAAEKAGCAVLVVPNDVP-
MUL_0545|M.ulcerans_Agy99 KPDPQGYLLAADALRVNIGSTIVFEDSPAGIRAGIASNALTVAIG--TL-
MAV_1053|M.avium_104 KPDPAVYLHAGQVLGVAPEQGLAIEDSVAGVSSAVAAGYATVGNLMFVLP
** * : .. * ..**: :* :. . :
Mb3433|M.bovis_AF2122/97 INRTGRAAQAAQLRRHGADVVVTDLAELL--------------
Rv3400|M.tuberculosis_H37Rv INRTGRAAQAAQLRRHGADVVVTDLAELL--------------
MMAR_1144|M.marinum_M VDRVG---QAEDLRRNGADVVITDLAELLQS------------
MLBr_00393|M.leprae_Br4923 INRTGRVDQAEELRRIGANVVVTDLAELL--------------
TH_0959|M.thermoresistible__bu VQHSPRRRQIPSLTHVDVPLMREIHADLSAAPGPGVPAGHRPL
MSMEG_4183|M.smegmatis_MC2_155 VPHGPRRKQVESLSLLGVDDLRAIHAELGPE---RLSA-----
MAB_2130|M.abscessus_ATCC_1997 VPAGARRRHAASLSGLSVRDLRDAHADVLAATTCKPI------
Mflv_3054|M.gilvum_PYR-GCK VPGGLRRRHVQTLADLGPADLRRIHAEITRELGERTA------
Mvan_3473|M.vanbaalenii_PYR-1 VPGGLRRRHVGSLAGLDVADLRRIYAEIDRELRERTA------
MUL_0545|M.ulcerans_Agy99 AAFDGHIERFENFHGFEVAGQPPAGGVILSMPAPMNCGV----
MAV_1053|M.avium_104 DERDCRRAELIDAGAVAITDSWRALADVLLSSAVPAAGSSLA-
. . :