For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_0447 | lipV | - | 100% (255) | POSSIBLE LIPASE LIPV |
| M. thermoresistible (build 8) | TH_1312 | - | 9e-15 | 33.17% (208) | POSSIBLE HYDROLASE |
| M. thermoresistible (build 8) | TH_0592 | - | 1e-09 | 34.48% (116) | POSSIBLE HYDROLASE |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3228 | lipV | 1e-88 | 69.37% (222) | lipase LipV |
| M. gilvum PYR-GCK | Mflv_4667 | - | 1e-101 | 68.27% (249) | alpha/beta hydrolase fold |
| M. tuberculosis H37Rv | Rv3203 | lipV | 1e-88 | 69.37% (222) | lipase LipV |
| M. leprae Br4923 | MLBr_01921 | - | 2e-06 | 32.33% (133) | hypothetical protein MLBr_01921 |
| M. abscessus ATCC 19977 | MAB_3517 | - | 1e-86 | 58.50% (253) | putative hydrolase, alpha/beta fold LipV |
| M. marinum M | MMAR_1355 | lipV | 4e-95 | 65.22% (253) | lipase LipV |
| M. avium 104 | MAV_4150 | - | 2e-99 | 68.38% (253) | hydrolase, alpha/beta fold family protein |
| M. smegmatis MC2 155 | MSMEG_1940 | - | 1e-104 | 70.47% (254) | hydrolase, alpha/beta fold family protein |
| M. ulcerans Agy99 | MUL_2524 | lipV | 1e-95 | 65.61% (253) | lipase LipV |
| M. vanbaalenii PYR-1 | Mvan_1800 | - | 9e-99 | 66.27% (252) | alpha/beta hydrolase fold |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_4667|M.gilvum_PYR-GCK MTEQLCTYRFGPAGPARVLAIHGLTGHGKRWESLFTRHLSDIPAVAPDLV
Mvan_1800|M.vanbaalenii_PYR-1 MTDLLCTYRFGPPGPARVLAIHGLTGHGKRWETLFTRHLPDVTALAPDLL
Mb3228|M.bovis_AF2122/97 --------------------------------------MPEIPIAAPDLL
Rv3203|M.tuberculosis_H37Rv --------------------------------------MPEIPIAAPDLL
MMAR_1355|M.marinum_M MSTDLHVHRYGPEEPVRVLTIHGVTEHGQSWEYLAG-YLPEVSIAAPDLL
MUL_2524|M.ulcerans_Agy99 MSTDLHVHRYGPEEPVRVLTIHGVTEHGQSWEYLAG-YLPEVNIAAPDLL
MAV_4150|M.avium_104 MTATLHVHRYGPPGPARILALHGLTGHGQRWQHLAG-LLPEFAWAAPDLV
TH_0447|M.thermoresistible__bu ------VYRYGPAGPPRLLAIHGLTGHGRRWQTLATRHLPEIAVAAPDLI
MSMEG_1940|M.smegmatis_MC2_155 ---MLHVHRYGPAGAAQVLLIHGLTGHGQRWQTLATEHLPEVGVLAPDLI
MAB_3517|M.abscessus_ATCC_1997 MTPTLNIHRYGPVEPARLLALHGLTGHGRRWAPLFDEYLADVPVLAPDLL
MLBr_01921|M.leprae_Br4923 MSTNLLTLRGGRGKP--LILVHGLMGRGNTWSRQLPWLSQLGTVYTYDAP
: *
Mflv_4667|M.gilvum_PYR-GCK GHGRSSWDAPWTIEAN--VAALTALLDAEAEGPVVVVGHSFGGAIALNLA
Mvan_1800|M.vanbaalenii_PYR-1 GHGRSSWDAPWTIDAN--VAALAALVDAEADGPVVVVGHSFGGAIALNLA
Mb3228|M.bovis_AF2122/97 GHGRSPWAAPWTIDAN--VSALAALLDNQGDGPVVVVGHSFGGAVAMHLA
Rv3203|M.tuberculosis_H37Rv GHGRSPWAAPWTIDAN--VSALAALLDNQGDGPVVVVGHSFGGAVAMHLA
MMAR_1355|M.marinum_M GHGRSSWAAPWSIDAN--VSALAALLKDQADGPVVVVGHSFGGAVALQLA
MUL_2524|M.ulcerans_Agy99 GHGRSSWAAPWSIDAN--VSALAALLKDQADGPVVVVGHSFGGAVALQLA
MAV_4150|M.avium_104 GHGRSSWSAPWTIDAN--ISALADLLDAQAGAPVLVVGHSFGAGLAMHLA
TH_0447|M.thermoresistible__bu GHGRSSWAAPWTFEAN--VGALVALLEDQADGPVVVVGHSFGGAVAMHLA
MSMEG_1940|M.smegmatis_MC2_155 GHGRSSWAAPWTIDAN--VAALAALLDR----PTLVVGHSFGGALALNLS
MAB_3517|M.abscessus_ATCC_1997 GHGRSPATAPWSLEAH--ADAVAAELDTAETGPIVVVGHSFGGAIALHLA
MLBr_01921|M.leprae_Br4923 WHRGRNVVDPYPISTERFVTDLADAVSTLG-VPARLVGHSMGAMHSWCLA
* *:.:.:. :. :. * :****:*. : *:
Mflv_4667|M.gilvum_PYR-GCK AARPDLIAGLVLLDPAVGLDGRWMREIADEMYTSPDYTDREEARQEKIGG
Mvan_1800|M.vanbaalenii_PYR-1 AVRPDLVAGLVLLDPAVALDGRWMREVADDMYNSPDYTDREEARQEKIGG
Mb3228|M.bovis_AF2122/97 AARPDQVAALVLLDPAVALDGSRVREVVDAMLASPDYLDPAEARAEKATG
Rv3203|M.tuberculosis_H37Rv AARPDQVAALVLLDPAVALDGSRVREVVDAMLASPDYLDPAEARAEKATG
MMAR_1355|M.marinum_M AAHPDLVAALILLDPAIGLNGSRVREVVDAMVAFPDYTDPAEARMERAYG
MUL_2524|M.ulcerans_Agy99 AAHPDLVAALILLDPAIGLDGSRVREVVDAMVAFPDYTDPAEARMERAYG
MAV_4150|M.avium_104 AVRPDRVAGLLLLDPAIGLDGAWMREIAEAMLASPDYPDAEEARLEKLHG
TH_0447|M.thermoresistible__bu AARPDLVAGLVLLDPAIGLDGEWMREIAESMLASPDYPDREEARTEKFTG
MSMEG_1940|M.smegmatis_MC2_155 AAHPDLVSGLVLLDPAIGLDGEWMRDIADDMLSSPDYPDREEARLDKVNG
MAB_3517|M.abscessus_ATCC_1997 ARRPDLVKSLVLLDPAIGLDGDWMRQIADQMVTYPDYTDRAEAKSDKVAG
MLBr_01921|M.leprae_Br4923 AERPDLVSALVVEDMAPDFRGCSTGPWEPWLRGIPVEFDSVEKVFDEFGP
* :** : .*:: * * : * : * * * :.
Mflv_4667|M.gilvum_PYR-GCK SWGEVAEDELDRELDEHLVASAGGRVGWRISIPAMLCYWSELTRPAVIPR
Mvan_1800|M.vanbaalenii_PYR-1 SWGEVAEDELDRELDEHLVEQTDGRVGWRISIPATLSYWSELTRAVPVPR
Mb3228|M.bovis_AF2122/97 AWADVDPPVLDAELDEHLVALPNGRYGWRISLPAMVCYWSELARDIVLPP
Rv3203|M.tuberculosis_H37Rv AWADVDPPVLDAELDEHLVALPNGRYGWRISLPAMVCYWSELARDIVLPP
MMAR_1355|M.marinum_M AWADVDPAVLDAELDEHLITLPNGRYSWRISLPAMVCYWSELARDAALPP
MUL_2524|M.ulcerans_Agy99 AWADVDPAVLDAELDEHLITLPNGRYSWRISLPAMVCYWSELARDAALPP
MAV_4150|M.avium_104 SWSDVEPALLDAEIDEHLIELPNGRYGWRVCLPAMMSYWSELARDPVLPP
TH_0447|M.thermoresistible__bu SWADVEPAELDRDLDEHLIALPGGRFGWRICVPAMMAYWSELARDVVLPP
MSMEG_1940|M.smegmatis_MC2_155 SWGEVDPAEVERELDEHLVEVGEGRVGWRISIPAAMSYWSELARPVVLPH
MAB_3517|M.abscessus_ATCC_1997 AWSDVPDHVIEAELDEHLIQLSNGRCGWRMNLPAAVTAWSELARDIVLPV
MLBr_01921|M.leprae_Br4923 VAGQYFLDAFDRTSTGWQLHGHTSRWIEIAAEWGTRDYWEHWL------A
.: .: : .* . *..
Mflv_4667|M.gilvum_PYR-GCK DGTPTTLVRATRTDPPYAGDELVAALDAGLGPNFTLLEWDCDHMVPLARP
Mvan_1800|M.vanbaalenii_PYR-1 DGTPTTLVRATHTDPPYASDELIATLDAGLGASLTVLEWDCDHMVPLAKP
Mb3228|M.bovis_AF2122/97 VGTATTLVRAVRASPAYVSDQLLAALDKRLGADFELLDFDCGHMVPQAKP
Rv3203|M.tuberculosis_H37Rv VGTATTLVRAVRASPAYVSDQLLAALDKRLGADFELLDFDCGHMVPQAKP
MMAR_1355|M.marinum_M PGIATTLVRAVRADPQYVSDELIAALRERLGADFALREFECGHMVPQAKP
MUL_2524|M.ulcerans_Agy99 PGIATTLVRAVRADPQYVSDELIAALRERLGADFALREFECGHMVPQAKP
MAV_4150|M.avium_104 AQTATILVRAKRTAPPYVGDELIAALQDRLGSRFRLLDFDCNHMVPYAKP
TH_0447|M.thermoresistible__bu SGIPTTLVRAAWTDPPYVTGELLDGLSQRLGADLTLVDLDCLHMVAQAKP
MSMEG_1940|M.smegmatis_MC2_155 NPIPTVLVRAKRCRPPFVADALIDGLTDRLGSKFTLLDWDCDHMVAQAKP
MAB_3517|M.abscessus_ATCC_1997 NVIRTTLLLATRTSPPYVLPKLLDALQATLGSQFELIDIDCDHMVSQSRP
MLBr_01921|M.leprae_Br4923 VRSPVLLIEAGTSVTPHG---QMLAMTKTACRTTYLYVPEAGHLIHDEAT
. *: * . . : : : :. *:: .
Mflv_4667|M.gilvum_PYR-GCK TETARLIRDLLP------
Mvan_1800|M.vanbaalenii_PYR-1 AETAAAIRDRLV------
Mb3228|M.bovis_AF2122/97 TEVAAVIRSRLGPR----
Rv3203|M.tuberculosis_H37Rv TEVAAVIRSRLGPR----
MMAR_1355|M.marinum_M TEVATLIREQLKTP----
MUL_2524|M.ulcerans_Agy99 TEVATLIREQLKTP----
MAV_4150|M.avium_104 DDVAALARELLKAR----
TH_0447|M.thermoresistible__bu AETAELIRRHLG------
MSMEG_1940|M.smegmatis_MC2_155 AETAELIRRQLG------
MAB_3517|M.abscessus_ATCC_1997 AETAAAIRSHLE------
MLBr_01921|M.leprae_Br4923 QVYRQAVVSFLAGCAGRD
*