For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVDSSAGAKPVSADKPASAQSHPGSPAPQAPQ PAGQTEGNAAAAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKGLTNAPQYYVGDQPKFTMVVTN IGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNETLVKTFSPGEQVTTAVTWTGMGSAPRCPLPRP AIGPGTYNLVVQLGNLRSLPVPFILNQPPPPPGPVPAPGPAQAPPPESPAQGG*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv3587c | - | - | 100% (264) | PROBABLE CONSERVED MEMBRANE PROTEIN |
| M. tuberculosis H37Rv | Rv0018c | ppp | 4e-05 | 37.14% (70) | serine/threonine phosphatase |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3618c | - | 1e-156 | 100.00% (264) | hypothetical protein Mb3618c |
| M. gilvum PYR-GCK | Mflv_1440 | - | 2e-93 | 66.28% (261) | hypothetical protein Mflv_1440 |
| M. leprae Br4923 | MLBr_01918 | - | 1e-121 | 77.90% (267) | hypothetical protein MLBr_01918 |
| M. abscessus ATCC 19977 | MAB_0561 | - | 1e-84 | 60.16% (251) | hypothetical protein MAB_0561 |
| M. marinum M | MMAR_5087 | - | 1e-143 | 90.94% (265) | hypothetical protein MMAR_5087 |
| M. avium 104 | MAV_0566 | - | 1e-132 | 86.26% (262) | hypothetical protein MAV_0566 |
| M. smegmatis MC2 155 | MSMEG_6081 | - | 6e-99 | 69.06% (265) | hypothetical protein MSMEG_6081 |
| M. thermoresistible (build 8) | TH_0589 | - | 2e-85 | 66.80% (241) | PROBABLE CONSERVED MEMBRANE PROTEIN |
| M. ulcerans Agy99 | MUL_4163 | - | 1e-143 | 90.94% (265) | hypothetical protein MUL_4163 |
| M. vanbaalenii PYR-1 | Mvan_5344 | - | 2e-99 | 69.38% (258) | hypothetical protein Mvan_5344 |
CLUSTAL 2.0.9 multiple sequence alignment
Rv3587c|M.tuberculosis_H37Rv --------MLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVD
Mb3618c|M.bovis_AF2122/97 --------MLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVD
MMAR_5087|M.marinum_M MTWAYGVNVLDLEPRGPLPTEIYWRRRGLALGIAVVVIGVAVAAVIAFVG
MUL_4163|M.ulcerans_Agy99 MTWAYGVNVLDLEPRGPLPTEIYWRRRGLALGIAVVVIGVAVAAVIAFVG
MAV_0566|M.avium_104 MTWAYAANVLDLEPRGPLPTEIYWRRRGLAVGIAVVVIGVVAAAVIAFMG
MLBr_01918|M.leprae_Br4923 --------MLDLEPRGPLPTEIYWRRRGLAVGITVIVI--VIAAIVAVVG
MSMEG_6081|M.smegmatis_MC2_155 ---------MDLEPQGPLPAQIYWRRRALAIGIAVVVVGVVAAIVAVIMT
TH_0589|M.thermoresistible__bu -----------------------------------VVIGIIVAVVAMMVS
Mflv_1440|M.gilvum_PYR-GCK MTWAYRVDVLDLEPHGPLPRQIYWRRRALAAGIAALVIAVVVAVITVVVL
Mvan_5344|M.vanbaalenii_PYR-1 --------MLDLEPHGPLPRQIYWRRRALALGIAALVIGIVVAVVAVVVM
MAB_0561|M.abscessus_ATCC_1997 --------MMDMHPSGPLPSEIYWRRRALAIGVVVVVVAIVAAVIFALVG
:*: * : .:
Rv3587c|M.tuberculosis_H37Rv SSAG-AKPVSADKPASAQSHPGSPAPQAPQPAGQTEGNAAAAPP-QGQNP
Mb3618c|M.bovis_AF2122/97 SSAG-AKPVSADKPASAQSHPGSPAPQAPQPAGQTEGNAAAAPP-QGQNP
MMAR_5087|M.marinum_M SNAG-AKPANADKPAGAQDHPGSSAPQAPQPAGQTEGNAPGAPP-QGQNP
MUL_4163|M.ulcerans_Agy99 SHAG-AKPANADKPAGAQDHPGSSAPQAPQPAGQTEGNAPGAPP-QGQNP
MAV_0566|M.avium_104 HSAG-AKPANADKPNSAQSKPGSPAPQAPPPPGP-EGPAPAVPPAQGQNP
MLBr_01918|M.leprae_Br4923 NGAA-AQPANVDKPGSSQNHPGSATPKVLPPNGH-EGNLAPAPP-QGRNP
MSMEG_6081|M.smegmatis_MC2_155 NSSSGSENTAADQSNETAAQEAAP-PTPLPGEDP-AVKTPIVPPAQHAPP
TH_0589|M.thermoresistible__bu GGPD-AETEAANAEQPAATEEAEAGPTPLPGSDP-EVKTPIQPPPQEAPP
Mflv_1440|M.gilvum_PYR-GCK NTRS-TEQPAAS---ESAAETGQAAPPPLPGENP-DVKSPIQPPAQQAPP
Mvan_5344|M.vanbaalenii_PYR-1 NSTS-NEQPTAN---ESAAPAAEAVPPPLPGENP-EVKSPIQPPAQQAPP
MAB_0561|M.abscessus_ATCC_1997 GSAG-ADTKAAEKPAESAAPAGKPVILPPNEINK-PADKPAEAPVHDGPP
. .. : . . . . .* : *
Rv3587c|M.tuberculosis_H37Rv ETPTPTAAVQPPPVLKEGDDCPDSTLAVKGLTNAPQYYVGDQPKFTMVVT
Mb3618c|M.bovis_AF2122/97 ETPTPTAAVQPPPVLKEGDDCPDSTLAVKGLTNAPQYYVGDQPKFTMVVT
MMAR_5087|M.marinum_M ETPTPTAAVQPPPVLKEGDDCPDSTLAVKGLTNAPQYYIGDQPKFTMVVT
MUL_4163|M.ulcerans_Agy99 ETPTPTAAVQPPPVLKEGDDCPDSTLAVKGLTNAPQYYIGDQPKFTMVVT
MAV_0566|M.avium_104 ETPTPTAAVQPPPVLKEGDDCPDSTLAVKGLTNAPQYFIGDQPKFTMVVT
MLBr_01918|M.leprae_Br4923 ESSTSTAAVQPPPVLREGDDCPDSTLAVKGLTNVPQYFLGDQPKFTMVVT
MSMEG_6081|M.smegmatis_MC2_155 PTPTPTAAVTPPPVLKEGDDCPDSTLAVKGITSQPEYVVGDQPKFTMVVT
TH_0589|M.thermoresistible__bu PTPTPTAAVTPPPVLREGDDCPDSTLAVKGITSQPEYVVGDQPKFTMVVT
Mflv_1440|M.gilvum_PYR-GCK PTPTPTAAVVPPPILKEGDDCPDSTLAVKGITNQPQFIVGDQPKFTMVVT
Mvan_5344|M.vanbaalenii_PYR-1 PTPTPTAAVVPPPILKEGDDCPDSTLAVKGITNQPQYVVGDQPKFTMVVT
MAB_0561|M.abscessus_ATCC_1997 ---IAKPELVPPVALNPGDDCPDATLAVKASTDKPSYLAGEQPKFTMVVT
... : ** *. ******:*****. *. *.: *:*********
Rv3587c|M.tuberculosis_H37Rv NIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNETLVKTFSPGEQ
Mb3618c|M.bovis_AF2122/97 NIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNETLVKTFSPGEQ
MMAR_5087|M.marinum_M NIGLVACKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNETLVKTFAPGEQ
MUL_4163|M.ulcerans_Agy99 NIGLVACKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNETLVKTFAPGEQ
MAV_0566|M.avium_104 NIGLVACKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNETLIKTFTPGEQ
MLBr_01918|M.leprae_Br4923 NIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNETLVKTFTPGEQ
MSMEG_6081|M.smegmatis_MC2_155 NIGLVACKRDVGAAVLAAYVYSLDNTRLWSNLDCAPSNETLVKTFNPGEQ
TH_0589|M.thermoresistible__bu NIGLVACKRDVGAAVLAAYVYSLDNTRLWSNLDCAPSNETLVKTFNPGEQ
Mflv_1440|M.gilvum_PYR-GCK NIGLVACQRDVGAAVLAAYVYTLDNQRLWSNLDCAPSNETLIKTFQPGEQ
Mvan_5344|M.vanbaalenii_PYR-1 NIGLVACQRDVGAAVLAAYVYSLDNQRLWSNLDCAPSNETLIKTFQPGEQ
MAB_0561|M.abscessus_ATCC_1997 NIGLVQCKRDVGAAVLAASVFSVDNKRIWANLDCAPSQESSIKSFNPGEQ
***** *:********** *:::** *:*:*******:*: :*:* ****
Rv3587c|M.tuberculosis_H37Rv VTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQPP
Mb3618c|M.bovis_AF2122/97 VTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQPP
MMAR_5087|M.marinum_M VTTAVTWTGMGSAPKCPLPRPAIGPGTYNLVVQLGNLRSQPVPFILNPAP
MUL_4163|M.ulcerans_Agy99 VTTAVTWTGMGSAPKCPLPRPAIGPGTYNLVVQLGNLRSQPVPFILNPAP
MAV_0566|M.avium_104 VTTAVTWTGMGSAPHCPLPRPAIGPGTYNLVVQLGNLRSQPVPFIMNQPP
MLBr_01918|M.leprae_Br4923 VTTAVTWTGMGSSPHCPLPRPAIGPGTYNLVVQLGNLHSMPVPFILNQPP
MSMEG_6081|M.smegmatis_MC2_155 VTTEVTWTGMGSAPQCPLPRQPIGPGTYNLVVQLGNLRSAPVPFILAEAN
TH_0589|M.thermoresistible__bu VTTEVTWTGMGSAPNCPLPREPIGPGTYNLVVQLGNLRSSPVPFILSEAA
Mflv_1440|M.gilvum_PYR-GCK VTTEVTWTGMSSAPNCPLPRQPIGAGTYNLVVQLGNLRSAPVPFILAEAA
Mvan_5344|M.vanbaalenii_PYR-1 VTTEVTWTGMGSAPNCPLPRQPIGPGTYNLVVQLGNLRSATVPFILAQPA
MAB_0561|M.abscessus_ATCC_1997 VTTEVTWTGMGSAPNCPLPRPAIGPGTYSLVVQLGDLRSAPVPFIIGEKP
*** ******.*:*.***** .**.***.******:*:* .****:
Rv3587c|M.tuberculosis_H37Rv -PPPGPVPAPG-PAQAPPPESP-AQGG----
Mb3618c|M.bovis_AF2122/97 -PPPGPVPAPG-PAQAPPPESP-AQGG----
MMAR_5087|M.marinum_M -QPPGPLPAPG-PALAPPPEAPPAQGG----
MUL_4163|M.ulcerans_Agy99 -QPPGPLPAPG-PALAPPPEAPPAQGG----
MAV_0566|M.avium_104 -PPPGPVPGPGQPGAVPQPEAPPVPPPPAG-
MLBr_01918|M.leprae_Br4923 -PPPG---SSG-PALAPSPEAPPANVPVSGG
MSMEG_6081|M.smegmatis_MC2_155 PQQPAAPPADGAPGPDAPGAGN---------
TH_0589|M.thermoresistible__bu PVGHGPAPGPAPQQQEQPAAAGTN-------
Mflv_1440|M.gilvum_PYR-GCK -AMPP--PVEGAPHLPVPGPAPVG-------
Mvan_5344|M.vanbaalenii_PYR-1 -QAPPPAPADGAPHLPVPG--PVG-------
MAB_0561|M.abscessus_ATCC_1997 -------------ADAPPPAGPPA-------