For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTWAYRVDVLDLEPHGPLPRQIYWRRRALAAGIAALVIAVVVAVITVVVLNTRSTEQPAASESAAETGQA APPPLPGENPDVKSPIQPPAQQAPPPTPTPTAAVVPPPILKEGDDCPDSTLAVKGITNQPQFIVGDQPKF TMVVTNIGLVACQRDVGAAVLAAYVYTLDNQRLWSNLDCAPSNETLIKTFQPGEQVTTEVTWTGMSSAPN CPLPRQPIGAGTYNLVVQLGNLRSAPVPFILAEAAAMPPPVEGAPHLPVPGPAPVG
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. gilvum PYR-GCK | Mflv_1440 | - | - | 100% (266) | hypothetical protein Mflv_1440 |
| M. gilvum PYR-GCK | Mflv_2951 | - | 1e-06 | 29.29% (99) | hypothetical protein Mflv_2951 |
| M. gilvum PYR-GCK | Mflv_5241 | - | 3e-05 | 30.56% (108) | hypothetical protein Mflv_5241 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3618c | - | 1e-93 | 66.28% (261) | hypothetical protein Mb3618c |
| M. tuberculosis H37Rv | Rv3587c | - | 1e-93 | 66.28% (261) | hypothetical protein Rv3587c |
| M. leprae Br4923 | MLBr_01918 | - | 1e-87 | 62.69% (260) | hypothetical protein MLBr_01918 |
| M. abscessus ATCC 19977 | MAB_0561 | - | 4e-80 | 58.33% (252) | hypothetical protein MAB_0561 |
| M. marinum M | MMAR_5087 | - | 1e-97 | 67.16% (268) | hypothetical protein MMAR_5087 |
| M. avium 104 | MAV_0566 | - | 1e-100 | 66.67% (270) | hypothetical protein MAV_0566 |
| M. smegmatis MC2 155 | MSMEG_6081 | - | 1e-112 | 75.58% (258) | hypothetical protein MSMEG_6081 |
| M. thermoresistible (build 8) | TH_0589 | - | 2e-98 | 72.46% (236) | PROBABLE CONSERVED MEMBRANE PROTEIN |
| M. ulcerans Agy99 | MUL_4163 | - | 1e-97 | 67.16% (268) | hypothetical protein MUL_4163 |
| M. vanbaalenii PYR-1 | Mvan_5344 | - | 1e-132 | 87.89% (256) | hypothetical protein Mvan_5344 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3618c|M.bovis_AF2122/97 --------MLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVD
Rv3587c|M.tuberculosis_H37Rv --------MLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVD
MMAR_5087|M.marinum_M MTWAYGVNVLDLEPRGPLPTEIYWRRRGLALGIAVVVIGVAVAAVIAFVG
MUL_4163|M.ulcerans_Agy99 MTWAYGVNVLDLEPRGPLPTEIYWRRRGLALGIAVVVIGVAVAAVIAFVG
MAV_0566|M.avium_104 MTWAYAANVLDLEPRGPLPTEIYWRRRGLAVGIAVVVIGVVAAAVIAFMG
MLBr_01918|M.leprae_Br4923 --------MLDLEPRGPLPTEIYWRRRGLAVGITVIVI--VIAAIVAVVG
Mflv_1440|M.gilvum_PYR-GCK MTWAYRVDVLDLEPHGPLPRQIYWRRRALAAGIAALVIAVVVAVITVVVL
Mvan_5344|M.vanbaalenii_PYR-1 --------MLDLEPHGPLPRQIYWRRRALALGIAALVIGIVVAVVAVVVM
MSMEG_6081|M.smegmatis_MC2_155 ---------MDLEPQGPLPAQIYWRRRALAIGIAVVVVGVVAAIVAVIMT
TH_0589|M.thermoresistible__bu -----------------------------------VVIGIIVAVVAMMVS
MAB_0561|M.abscessus_ATCC_1997 --------MMDMHPSGPLPSEIYWRRRALAIGVVVVVVAIVAAVIFALVG
:*: * : .:
Mb3618c|M.bovis_AF2122/97 SSAG-AKPVSADKPASAQSHPGSPAPQAPQPAGQTEGNAAAAPP-QGQNP
Rv3587c|M.tuberculosis_H37Rv SSAG-AKPVSADKPASAQSHPGSPAPQAPQPAGQTEGNAAAAPP-QGQNP
MMAR_5087|M.marinum_M SNAG-AKPANADKPAGAQDHPGSSAPQAPQPAGQTEGNAPGAPP-QGQNP
MUL_4163|M.ulcerans_Agy99 SHAG-AKPANADKPAGAQDHPGSSAPQAPQPAGQTEGNAPGAPP-QGQNP
MAV_0566|M.avium_104 HSAG-AKPANADKPNSAQSKPGSPAPQAPPPPGP-EGPAPAVPPAQGQNP
MLBr_01918|M.leprae_Br4923 NGAA-AQPANVDKPGSSQNHPGSATPKVLPPNGH-EGNLAPAPP-QGRNP
Mflv_1440|M.gilvum_PYR-GCK NTRS-TEQPAAS---ESAAETGQAAPPPLPGENP-DVKSPIQPPAQQAPP
Mvan_5344|M.vanbaalenii_PYR-1 NSTS-NEQPTAN---ESAAPAAEAVPPPLPGENP-EVKSPIQPPAQQAPP
MSMEG_6081|M.smegmatis_MC2_155 NSSSGSENTAADQSNETAAQEAAP-PTPLPGEDP-AVKTPIVPPAQHAPP
TH_0589|M.thermoresistible__bu GGPD-AETEAANAEQPAATEEAEAGPTPLPGSDP-EVKTPIQPPPQEAPP
MAB_0561|M.abscessus_ATCC_1997 GSAG-ADTKAAEKPAESAAPAGKPVILPPNEINK-PADKPAEAPVHDGPP
. .. : . . . . .* : *
Mb3618c|M.bovis_AF2122/97 ETPTPTAAVQPPPVLKEGDDCPDSTLAVKGLTNAPQYYVGDQPKFTMVVT
Rv3587c|M.tuberculosis_H37Rv ETPTPTAAVQPPPVLKEGDDCPDSTLAVKGLTNAPQYYVGDQPKFTMVVT
MMAR_5087|M.marinum_M ETPTPTAAVQPPPVLKEGDDCPDSTLAVKGLTNAPQYYIGDQPKFTMVVT
MUL_4163|M.ulcerans_Agy99 ETPTPTAAVQPPPVLKEGDDCPDSTLAVKGLTNAPQYYIGDQPKFTMVVT
MAV_0566|M.avium_104 ETPTPTAAVQPPPVLKEGDDCPDSTLAVKGLTNAPQYFIGDQPKFTMVVT
MLBr_01918|M.leprae_Br4923 ESSTSTAAVQPPPVLREGDDCPDSTLAVKGLTNVPQYFLGDQPKFTMVVT
Mflv_1440|M.gilvum_PYR-GCK PTPTPTAAVVPPPILKEGDDCPDSTLAVKGITNQPQFIVGDQPKFTMVVT
Mvan_5344|M.vanbaalenii_PYR-1 PTPTPTAAVVPPPILKEGDDCPDSTLAVKGITNQPQYVVGDQPKFTMVVT
MSMEG_6081|M.smegmatis_MC2_155 PTPTPTAAVTPPPVLKEGDDCPDSTLAVKGITSQPEYVVGDQPKFTMVVT
TH_0589|M.thermoresistible__bu PTPTPTAAVTPPPVLREGDDCPDSTLAVKGITSQPEYVVGDQPKFTMVVT
MAB_0561|M.abscessus_ATCC_1997 ---IAKPELVPPVALNPGDDCPDATLAVKASTDKPSYLAGEQPKFTMVVT
... : ** *. ******:*****. *. *.: *:*********
Mb3618c|M.bovis_AF2122/97 NIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNETLVKTFSPGEQ
Rv3587c|M.tuberculosis_H37Rv NIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNETLVKTFSPGEQ
MMAR_5087|M.marinum_M NIGLVACKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNETLVKTFAPGEQ
MUL_4163|M.ulcerans_Agy99 NIGLVACKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNETLVKTFAPGEQ
MAV_0566|M.avium_104 NIGLVACKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNETLIKTFTPGEQ
MLBr_01918|M.leprae_Br4923 NIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNETLVKTFTPGEQ
Mflv_1440|M.gilvum_PYR-GCK NIGLVACQRDVGAAVLAAYVYTLDNQRLWSNLDCAPSNETLIKTFQPGEQ
Mvan_5344|M.vanbaalenii_PYR-1 NIGLVACQRDVGAAVLAAYVYSLDNQRLWSNLDCAPSNETLIKTFQPGEQ
MSMEG_6081|M.smegmatis_MC2_155 NIGLVACKRDVGAAVLAAYVYSLDNTRLWSNLDCAPSNETLVKTFNPGEQ
TH_0589|M.thermoresistible__bu NIGLVACKRDVGAAVLAAYVYSLDNTRLWSNLDCAPSNETLVKTFNPGEQ
MAB_0561|M.abscessus_ATCC_1997 NIGLVQCKRDVGAAVLAASVFSVDNKRIWANLDCAPSQESSIKSFNPGEQ
***** *:********** *:::** *:*:*******:*: :*:* ****
Mb3618c|M.bovis_AF2122/97 VTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQP-
Rv3587c|M.tuberculosis_H37Rv VTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQP-
MMAR_5087|M.marinum_M VTTAVTWTGMGSAPKCPLPRPAIGPGTYNLVVQLGNLRSQPVPFILNPA-
MUL_4163|M.ulcerans_Agy99 VTTAVTWTGMGSAPKCPLPRPAIGPGTYNLVVQLGNLRSQPVPFILNPA-
MAV_0566|M.avium_104 VTTAVTWTGMGSAPHCPLPRPAIGPGTYNLVVQLGNLRSQPVPFIMNQP-
MLBr_01918|M.leprae_Br4923 VTTAVTWTGMGSSPHCPLPRPAIGPGTYNLVVQLGNLHSMPVPFILNQP-
Mflv_1440|M.gilvum_PYR-GCK VTTEVTWTGMSSAPNCPLPRQPIGAGTYNLVVQLGNLRSAPVPFILAEAA
Mvan_5344|M.vanbaalenii_PYR-1 VTTEVTWTGMGSAPNCPLPRQPIGPGTYNLVVQLGNLRSATVPFILAQPA
MSMEG_6081|M.smegmatis_MC2_155 VTTEVTWTGMGSAPQCPLPRQPIGPGTYNLVVQLGNLRSAPVPFILAEAN
TH_0589|M.thermoresistible__bu VTTEVTWTGMGSAPNCPLPREPIGPGTYNLVVQLGNLRSSPVPFILSEAA
MAB_0561|M.abscessus_ATCC_1997 VTTEVTWTGMGSAPNCPLPRPAIGPGTYSLVVQLGDLRSAPVPFIIGEK-
*** ******.*:*.***** .**.***.******:*:* .****:
Mb3618c|M.bovis_AF2122/97 PPPPGPVPAPG-PAQAPPPESP-AQGG----
Rv3587c|M.tuberculosis_H37Rv PPPPGPVPAPG-PAQAPPPESP-AQGG----
MMAR_5087|M.marinum_M PQPPGPLPAPG-PALAPPPEAPPAQGG----
MUL_4163|M.ulcerans_Agy99 PQPPGPLPAPG-PALAPPPEAPPAQGG----
MAV_0566|M.avium_104 PPPPGPVPGPGQPGAVPQPEAPPVPPPPAG-
MLBr_01918|M.leprae_Br4923 PPPPG---SSG-PALAPSPEAPPANVPVSGG
Mflv_1440|M.gilvum_PYR-GCK AMPP---PVEGAPHLPVPGPAPVG-------
Mvan_5344|M.vanbaalenii_PYR-1 QAPPP-APADGAPHLPVPG--PVG-------
MSMEG_6081|M.smegmatis_MC2_155 PQQPAAPPADGAPGPDAPGAGN---------
TH_0589|M.thermoresistible__bu PVGHGPAPGPAPQQQEQPAAAGTN-------
MAB_0561|M.abscessus_ATCC_1997 ------------PADAPPPAGPPA-------