For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TWAYGVNVLDLEPRGPLPTEIYWRRRGLALGIAVVVIGVAVAAVIAFVGSNAGAKPANADKPAGAQDHPG SSAPQAPQPAGQTEGNAPGAPPQGQNPETPTPTAAVQPPPVLKEGDDCPDSTLAVKGLTNAPQYYIGDQP KFTMVVTNIGLVACKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNETLVKTFAPGEQVTTAVTWTGMGSA PKCPLPRPAIGPGTYNLVVQLGNLRSQPVPFILNPAPQPPGPLPAPGPALAPPPEAPPAQGG*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_5087 | - | - | 100% (273) | hypothetical protein MMAR_5087 |
M. marinum M | MMAR_4984 | mce4D | 5e-05 | 40.00% (80) | MCE-family protein Mce4D |
M. marinum M | MMAR_4294 | - | 7e-05 | 41.89% (74) | hypothetical protein MMAR_4294 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3618c | - | 1e-143 | 90.94% (265) | hypothetical protein Mb3618c |
M. gilvum PYR-GCK | Mflv_1440 | - | 1e-97 | 67.16% (268) | hypothetical protein Mflv_1440 |
M. tuberculosis H37Rv | Rv3587c | - | 1e-143 | 90.94% (265) | hypothetical protein Rv3587c |
M. leprae Br4923 | MLBr_01918 | - | 1e-121 | 79.39% (262) | hypothetical protein MLBr_01918 |
M. abscessus ATCC 19977 | MAB_0561 | - | 2e-82 | 57.63% (262) | hypothetical protein MAB_0561 |
M. avium 104 | MAV_0566 | - | 1e-137 | 86.72% (271) | hypothetical protein MAV_0566 |
M. smegmatis MC2 155 | MSMEG_6081 | - | 2e-99 | 69.96% (263) | hypothetical protein MSMEG_6081 |
M. thermoresistible (build 8) | TH_0589 | - | 5e-88 | 69.29% (241) | PROBABLE CONSERVED MEMBRANE PROTEIN |
M. ulcerans Agy99 | MUL_4163 | - | 1e-163 | 99.63% (273) | hypothetical protein MUL_4163 |
M. vanbaalenii PYR-1 | Mvan_5344 | - | 6e-98 | 68.99% (258) | hypothetical protein Mvan_5344 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_5087|M.marinum_M MTWAYGVNVLDLEPRGPLPTEIYWRRRGLALGIAVVVIGVAVAAVIAFVG MUL_4163|M.ulcerans_Agy99 MTWAYGVNVLDLEPRGPLPTEIYWRRRGLALGIAVVVIGVAVAAVIAFVG Mb3618c|M.bovis_AF2122/97 --------MLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVD Rv3587c|M.tuberculosis_H37Rv --------MLDLEPRGPLPTEIYWRRRGLALGIAVVVVGIAVAIVIAFVD MAV_0566|M.avium_104 MTWAYAANVLDLEPRGPLPTEIYWRRRGLAVGIAVVVIGVVAAAVIAFMG MLBr_01918|M.leprae_Br4923 --------MLDLEPRGPLPTEIYWRRRGLAVGITVIVI--VIAAIVAVVG MSMEG_6081|M.smegmatis_MC2_155 ---------MDLEPQGPLPAQIYWRRRALAIGIAVVVVGVVAAIVAVIMT TH_0589|M.thermoresistible__bu -----------------------------------VVIGIIVAVVAMMVS Mflv_1440|M.gilvum_PYR-GCK MTWAYRVDVLDLEPHGPLPRQIYWRRRALAAGIAALVIAVVVAVITVVVL Mvan_5344|M.vanbaalenii_PYR-1 --------MLDLEPHGPLPRQIYWRRRALALGIAALVIGIVVAVVAVVVM MAB_0561|M.abscessus_ATCC_1997 --------MMDMHPSGPLPSEIYWRRRALAIGVVVVVVAIVAAVIFALVG :*: * : .: MMAR_5087|M.marinum_M SNAG-AKPANADKPAGAQDHPGSSAPQAPQPAGQTEGNAPGAPP-QGQNP MUL_4163|M.ulcerans_Agy99 SHAG-AKPANADKPAGAQDHPGSSAPQAPQPAGQTEGNAPGAPP-QGQNP Mb3618c|M.bovis_AF2122/97 SSAG-AKPVSADKPASAQSHPGSPAPQAPQPAGQTEGNAAAAPP-QGQNP Rv3587c|M.tuberculosis_H37Rv SSAG-AKPVSADKPASAQSHPGSPAPQAPQPAGQTEGNAAAAPP-QGQNP MAV_0566|M.avium_104 HSAG-AKPANADKPNSAQSKPGSPAPQAPPPPGP-EGPAPAVPPAQGQNP MLBr_01918|M.leprae_Br4923 NGAA-AQPANVDKPGSSQNHPGSATPKVLPPNGH-EGNLAPAPP-QGRNP MSMEG_6081|M.smegmatis_MC2_155 NSSSGSENTAADQSNETAAQEAAP-PTPLPGEDP-AVKTPIVPPAQHAPP TH_0589|M.thermoresistible__bu GGPD-AETEAANAEQPAATEEAEAGPTPLPGSDP-EVKTPIQPPPQEAPP Mflv_1440|M.gilvum_PYR-GCK NTRS-TEQPAAS---ESAAETGQAAPPPLPGENP-DVKSPIQPPAQQAPP Mvan_5344|M.vanbaalenii_PYR-1 NSTS-NEQPTAN---ESAAPAAEAVPPPLPGENP-EVKSPIQPPAQQAPP MAB_0561|M.abscessus_ATCC_1997 GSAG-ADTKAAEKPAESAAPAGKPVILPPNEINK-PADKPAEAPVHDGPP . .. : . . . . .* : * MMAR_5087|M.marinum_M ETPTPTAAVQPPPVLKEGDDCPDSTLAVKGLTNAPQYYIGDQPKFTMVVT MUL_4163|M.ulcerans_Agy99 ETPTPTAAVQPPPVLKEGDDCPDSTLAVKGLTNAPQYYIGDQPKFTMVVT Mb3618c|M.bovis_AF2122/97 ETPTPTAAVQPPPVLKEGDDCPDSTLAVKGLTNAPQYYVGDQPKFTMVVT Rv3587c|M.tuberculosis_H37Rv ETPTPTAAVQPPPVLKEGDDCPDSTLAVKGLTNAPQYYVGDQPKFTMVVT MAV_0566|M.avium_104 ETPTPTAAVQPPPVLKEGDDCPDSTLAVKGLTNAPQYFIGDQPKFTMVVT MLBr_01918|M.leprae_Br4923 ESSTSTAAVQPPPVLREGDDCPDSTLAVKGLTNVPQYFLGDQPKFTMVVT MSMEG_6081|M.smegmatis_MC2_155 PTPTPTAAVTPPPVLKEGDDCPDSTLAVKGITSQPEYVVGDQPKFTMVVT TH_0589|M.thermoresistible__bu PTPTPTAAVTPPPVLREGDDCPDSTLAVKGITSQPEYVVGDQPKFTMVVT Mflv_1440|M.gilvum_PYR-GCK PTPTPTAAVVPPPILKEGDDCPDSTLAVKGITNQPQFIVGDQPKFTMVVT Mvan_5344|M.vanbaalenii_PYR-1 PTPTPTAAVVPPPILKEGDDCPDSTLAVKGITNQPQYVVGDQPKFTMVVT MAB_0561|M.abscessus_ATCC_1997 ---IAKPELVPPVALNPGDDCPDATLAVKASTDKPSYLAGEQPKFTMVVT ... : ** *. ******:*****. *. *.: *:********* MMAR_5087|M.marinum_M NIGLVACKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNETLVKTFAPGEQ MUL_4163|M.ulcerans_Agy99 NIGLVACKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNETLVKTFAPGEQ Mb3618c|M.bovis_AF2122/97 NIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNETLVKTFSPGEQ Rv3587c|M.tuberculosis_H37Rv NIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNETLVKTFSPGEQ MAV_0566|M.avium_104 NIGLVACKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNETLIKTFTPGEQ MLBr_01918|M.leprae_Br4923 NIGLVSCKRDVGAAVLAAYVYSLDNKRLWSNLDCAPSNETLVKTFTPGEQ MSMEG_6081|M.smegmatis_MC2_155 NIGLVACKRDVGAAVLAAYVYSLDNTRLWSNLDCAPSNETLVKTFNPGEQ TH_0589|M.thermoresistible__bu NIGLVACKRDVGAAVLAAYVYSLDNTRLWSNLDCAPSNETLVKTFNPGEQ Mflv_1440|M.gilvum_PYR-GCK NIGLVACQRDVGAAVLAAYVYTLDNQRLWSNLDCAPSNETLIKTFQPGEQ Mvan_5344|M.vanbaalenii_PYR-1 NIGLVACQRDVGAAVLAAYVYSLDNQRLWSNLDCAPSNETLIKTFQPGEQ MAB_0561|M.abscessus_ATCC_1997 NIGLVQCKRDVGAAVLAASVFSVDNKRIWANLDCAPSQESSIKSFNPGEQ ***** *:********** *:::** *:*:*******:*: :*:* **** MMAR_5087|M.marinum_M VTTAVTWTGMGSAPKCPLPRPAIGPGTYNLVVQLGNLRSQPVPFILNPAP MUL_4163|M.ulcerans_Agy99 VTTAVTWTGMGSAPKCPLPRPAIGPGTYNLVVQLGNLRSQPVPFILNPAP Mb3618c|M.bovis_AF2122/97 VTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQPP Rv3587c|M.tuberculosis_H37Rv VTTAVTWTGMGSAPRCPLPRPAIGPGTYNLVVQLGNLRSLPVPFILNQPP MAV_0566|M.avium_104 VTTAVTWTGMGSAPHCPLPRPAIGPGTYNLVVQLGNLRSQPVPFIMNQPP MLBr_01918|M.leprae_Br4923 VTTAVTWTGMGSSPHCPLPRPAIGPGTYNLVVQLGNLHSMPVPFILNQPP MSMEG_6081|M.smegmatis_MC2_155 VTTEVTWTGMGSAPQCPLPRQPIGPGTYNLVVQLGNLRSAPVPFILAEAN TH_0589|M.thermoresistible__bu VTTEVTWTGMGSAPNCPLPREPIGPGTYNLVVQLGNLRSSPVPFILSEAA Mflv_1440|M.gilvum_PYR-GCK VTTEVTWTGMSSAPNCPLPRQPIGAGTYNLVVQLGNLRSAPVPFILAEAA Mvan_5344|M.vanbaalenii_PYR-1 VTTEVTWTGMGSAPNCPLPRQPIGPGTYNLVVQLGNLRSATVPFILAQPA MAB_0561|M.abscessus_ATCC_1997 VTTEVTWTGMGSAPNCPLPRPAIGPGTYSLVVQLGDLRSAPVPFIIGEKP *** ******.*:*.***** .**.***.******:*:* .****: MMAR_5087|M.marinum_M -QPPGPLPAPG-PALAPPPEAPPAQGG---- MUL_4163|M.ulcerans_Agy99 -QPPGPLPAPG-PALAPPPEAPPAQGG---- Mb3618c|M.bovis_AF2122/97 -PPPGPVPAPG-PAQAPPPESP-AQGG---- Rv3587c|M.tuberculosis_H37Rv -PPPGPVPAPG-PAQAPPPESP-AQGG---- MAV_0566|M.avium_104 -PPPGPVPGPGQPGAVPQPEAPPVPPPPAG- MLBr_01918|M.leprae_Br4923 -PPPG---SSG-PALAPSPEAPPANVPVSGG MSMEG_6081|M.smegmatis_MC2_155 PQQPAAPPADGAPGPDAPGAGN--------- TH_0589|M.thermoresistible__bu PVGHGPAPGPAPQQQEQPAAAGTN------- Mflv_1440|M.gilvum_PYR-GCK -AMPP--PVEGAPHLPVPGPAPVG------- Mvan_5344|M.vanbaalenii_PYR-1 -QAPPPAPADGAPHLPVPG--PVG------- MAB_0561|M.abscessus_ATCC_1997 -------------ADAPPPAGPPA-------