For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MPTSDPGLRRVTVHAGAQAVDLTLPAAVPVATLIPSIVDILGDRGASPATAARYQLSALGAPALPNATTL AQCGIRDGAVLVLHKSSAQPPTPRCDDVAEAVAAALDTTARPQCQRTTRLSGALAASCITAGGGLMLVRN ALGTNVTRYSDATAGVVAAAGLAALLFAVIACRTYRDPIAGLTLSVIATIFGAVAGLLAVPGVPGVHSVL VAAMAAAATSVLAMRITGCGGITLTAVACCAVVVAAATLVGAITAAPVPAIGSLATLASFGLLEVSARMA VLLAGLSPRLPPALNPDDADALPTTDRLTTRANRADAWLTSLLAAFAASATIGAIGTAVATHGIHRSSMG GIALAAVTGALLLLRARSADTRRSLVFAICGITTVATAFTVAADRALEHGPWIAALTAMLAAVAMFLGFV APALSLSPVTYRTIELLECLALIAMVPLTAWLCGAYSAVRHLDLTWT
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv3448 | - | - | 100% (467) | PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN |
M. tuberculosis H37Rv | Rv0290 | - | 1e-27 | 27.23% (481) | transmembrane protein |
M. tuberculosis H37Rv | Rv3877 | - | 3e-25 | 27.22% (507) | transmembrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3478 | - | 0.0 | 99.79% (467) | integral membrane protein |
M. gilvum PYR-GCK | Mflv_4960 | - | 1e-34 | 30.56% (468) | hypothetical protein Mflv_4960 |
M. leprae Br4923 | MLBr_02529 | - | 6e-21 | 26.03% (484) | hypothetical protein MLBr_02529 |
M. abscessus ATCC 19977 | MAB_3757 | - | 6e-58 | 34.06% (502) | hypothetical protein MAB_3757 |
M. marinum M | MMAR_1101 | - | 1e-115 | 51.61% (467) | hypothetical protein MMAR_1101 |
M. avium 104 | MAV_4391 | - | 9e-99 | 48.07% (466) | hypothetical protein MAV_4391 |
M. smegmatis MC2 155 | MSMEG_1535 | - | 2e-39 | 30.75% (465) | hypothetical protein MSMEG_1535 |
M. thermoresistible (build 8) | TH_3996 | - | 4e-49 | 32.03% (462) | PUTATIVE - |
M. ulcerans Agy99 | MUL_0859 | - | 1e-113 | 50.96% (467) | hypothetical protein MUL_0859 |
M. vanbaalenii PYR-1 | Mvan_1446 | - | 1e-40 | 32.19% (466) | hypothetical protein Mvan_1446 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4960|M.gilvum_PYR-GCK -----------------------MPDTLCRLTVHVVG--------ADESA Mvan_1446|M.vanbaalenii_PYR-1 MPFHPQPGKVLQRRPPGPSYVDFVPDTLRRVAVHALG--------PREAA MSMEG_1535|M.smegmatis_MC2_155 ----------------------MMPESLYRVSIHCA-------AADHAG- TH_3996|M.thermoresistible__bu -----------------------VSDSVRRVSVQIDTLVDMLIGTDRGGT Rv3448|M.tuberculosis_H37Rv --------------------MPTSDPGLRRVTVHAGA------------Q Mb3478|M.bovis_AF2122/97 --------------------MPTSDPGLRRVTVHAGA------------Q MMAR_1101|M.marinum_M -------------------MLSGSEPGLCRVAVHSGT------------A MUL_0859|M.ulcerans_Agy99 -------------------MLSGSEPGLCRVAVHSGT------------A MAV_4391|M.avium_104 ------------------MALAVSTTGLCRVSVHWET------------Q MAB_3757|M.abscessus_ATCC_1997 -----------MTHAQSGAEQRSAVLELCRVSIQAER------------T MLBr_02529|M.leprae_Br4923 ------MVYVFAEEFCEGPVTSGAVMPIVRVAILADS------------R : *::: Mflv_4960|M.gilvum_PYR-GCK AVDLVLPAACPLGELMPSLVDTIFGDT----------AGQEHWQLTRVTG Mvan_1446|M.vanbaalenii_PYR-1 AADLVLPAEQPLAELVPSIVDTVFGGP----------VGPRQWQLATPAG MSMEG_1535|M.smegmatis_MC2_155 AADLVLPAAMTVSQLLPSIVAAVGAPG----------DLPRRWYLAPPGG TH_3996|M.thermoresistible__bu VIDVTLPSGVEVAELIPAIVDLAVGADG------VDAESPTAWKLARVGG Rv3448|M.tuberculosis_H37Rv AVDLTLPAAVPVATLIPSIVDILGD-------RGASPATAARYQLSALGA Mb3478|M.bovis_AF2122/97 AVDLTLPAAVPVATLIPSIVDILGD-------RGASPATAARYQLSALGA MMAR_1101|M.marinum_M VVDLSLPAALPVAELIPAIVESLGG-------RDIG-AAPTRYQLCPLGA MUL_0859|M.ulcerans_Agy99 VVDLSLPAALPFAELIPAIVESLGG-------RDIG-AAPTRYQLCPLGA MAV_4391|M.avium_104 AVDVSLPAEIAVAELIPSLVDMLGA-------GDGG---AGRYRLSAPGA MAB_3757|M.abscessus_ATCC_1997 QVDLALPTSVPLALLVGSIVDIINQHVGVPELTSPEDAVETHWRLSRPGQ MLBr_02529|M.leprae_Br4923 LIEMALPTELPLREILPAVKRLVVPAASDND-SPLAANASLHLSLAPIGG :: **: . :: :: * Mflv_4960|M.gilvum_PYR-GCK PPLNPALSLRDNDIGDGDMVMLTASRVPSPRI-SPTEACTVVALAGGNRE Mvan_1446|M.vanbaalenii_PYR-1 VPLDSSMSLRDNVVEDGDVIVLTTARVPPPRL-LPTDPCAVVADAAEKGT MSMEG_1535|M.smegmatis_MC2_155 APLDESMTLAQNEVHDGAVLVLTARLPVAPRS-YGLIHALTAAAPTPTPP TH_3996|M.thermoresistible__bu TVLDASRTLTENGIREGELLMLTG---AASAP-VTRAEAPPGLEPAAGRW Rv3448|M.tuberculosis_H37Rv PALPNATTLAQCGIRDGAVLVLHKSSAQPPTP-RCDDVAEAVAAALDTTA Mb3478|M.bovis_AF2122/97 PALPNATTLAQCGIRDGAVLVLHKSSAQPPTP-RCDDVAEAVAAALDTTA MMAR_1101|M.marinum_M GALPPSQSLAQSGIRDGTVLSLSRCSAEPAPG-PHDDDAEAVLATLRGST MUL_0859|M.ulcerans_Agy99 GALPPSKSLAQRGIRDGTVLSLSRCSAEPAPG-PHDDDAEAVLATLRGST MAV_4391|M.avium_104 AALDPSTTLAHNHIGDGAILVLSRIDVPLPAP-RYRDIADTVSAALDATA MAB_3757|M.abscessus_ATCC_1997 PPLQMSSTLGELEVRDGDLLILTRSDVAAPDP-LFDDVFLAVSTFRTVSA MLBr_02529|M.leprae_Br4923 APFSLDASLDTVGVVDGDLLALQPVPVGPAAPGIVEDIADAAMIFSTARL : :* : :* :: * . Mflv_4960|M.gilvum_PYR-GCK SGHGATPWC-IAGIIVAAVTLVR------------SGMVTPGGWHLWCAA Mvan_1446|M.vanbaalenii_PYR-1 PGRGVNRAAGAAGIVACAVALVW------------SGTAAPTHWHLWCAA MSMEG_1535|M.smegmatis_MC2_155 PASRMFAGLWTCAVGMAAVLCAG------------IGTGGPTRVIVAAVV TH_3996|M.thermoresistible__bu HGARTALALWCPIAGTAAVVWTG------------LMRDDIGRTVPAAML Rv3448|M.tuberculosis_H37Rv RPQCQRTTRLSGALAASCITAGGGLMLVRNALGTNVTRYSDATAGVVAAA Mb3478|M.bovis_AF2122/97 RPQCQRTTRLSGALAASCITAGGGLMLVRNALGTNVTRYSDATAGVVAAA MMAR_1101|M.marinum_M RPPSRRAKELTGALTAGGVGGVGAVLLVRDALG-NTDRHGAATAVVAITS MUL_0859|M.ulcerans_Agy99 RPPSRRAKELTGALTAGGVGGVGAVLLVRDALG-NTDRHGAATAVVAITS MAV_4391|M.avium_104 RP-DVAVRRVAGAAAAASFVAAGGLQLVRNTFSASVVPDSGGTVAVLVST MAB_3757|M.abscessus_ATCC_1997 HPWSRNAARILGASVCGLSALLGATALLR----AGATNPGLLLPIIAVAI MLBr_02529|M.leprae_Br4923 QSWGPTHIRRGALAATTAVTFAATG------LGVTYRAVTGALTGLLVVI Mflv_4960|M.gilvum_PYR-GCK ALSGIAGTMSVALGRADRRVSTVLNTAAVVFAAATGVLAVPAAAWPAATL Mvan_1446|M.vanbaalenii_PYR-1 ALSGSAAVGAVAAARAEPELTALLSTAAVVFATAAGLLAVRSAPWPATVL MSMEG_1535|M.smegmatis_MC2_155 AVAVTAVAFASRRLALTAAAATSVQSLAVASVAILGFVAVPSDSGPGNVF TH_3996|M.thermoresistible__bu TVGAVAAVLPYR-HRRDPLTATASALIVVMLAAVLGLLVVPDGPGPPNLM Rv3448|M.tuberculosis_H37Rv GLAALLFAVIACRTYRDPIAGLTLSVIATIFGAVAGLLAVPGVPGVHSVL Mb3478|M.bovis_AF2122/97 GLAALLFAVIACRTYRDPIAGLTLSVIATIFGAVAGLLAVPGVPGVHSVL MMAR_1101|M.marinum_M GVLALLVAGMARRTGREPTAVFTLNVIATTFVAVGALLAVPGRLGVPNLM MUL_0859|M.ulcerans_Agy99 RVLALLVAGMTRRTGREPTAVFTLNVIATTFVAVGALLAVPGRLGVPNLM MAV_4391|M.avium_104 TLLTLGAAAVAHRGYRDPGAALALGAIATVFAGLAGFVAVPGAPSLSHVL MAB_3757|M.abscessus_ATCC_1997 ALVAMTAAVFANRVYDDSLASVMLSHCAVGFSAVAGALFVPGKYGAPHAM MLBr_02529|M.leprae_Br4923 VIAVLIALGGLVLRSRAARTGLVLSIAALVPIGAVFALAVPGIFGPAQVL : . : * : Mflv_4960|M.gilvum_PYR-GCK LAAASALAMSTLLARMCPG-AADLPAFCAVAGAVTAAAALSH----LAAP Mvan_1446|M.vanbaalenii_PYR-1 LASSAGFCMSVLLLRLVAD-RALLTAFTAAGGAATAAAGLAN----LAAS MSMEG_1535|M.smegmatis_MC2_155 LAATAAASLGVVLLRLTDGSVETMHAVVAFAVIAGIGAAVAT----LFPL TH_3996|M.thermoresistible__bu LAAAAAAAAAMVMARLTGVDIVGLTAVATGAAAVAISLIPAV----LWPV Rv3448|M.tuberculosis_H37Rv VAAMAAAATSVLAMRITGCGGITLTAVACCAVVVAAATLVGA----ITAA Mb3478|M.bovis_AF2122/97 VAAMAAAATSVLAMRITGCGGITLTAVACCAVVVAAATLVGA----ITAA MMAR_1101|M.marinum_M LAAMGASVAAALAIRLTGCGGVTFTAVMCCAIVIAAAALCGV----ITGA MUL_0859|M.ulcerans_Agy99 LAAMGASVAAALAIRLTGCGGVTFTAVMCCAIVIAAAALCGV----ITGA MAV_4391|M.avium_104 LAAAAAGLAAVSAIGLSGCG-AGLLALACWCLILATAALAGV----LSGA MAB_3757|M.abscessus_ATCC_1997 LALMVAMVVSILAMRATGTGTTSLVAVASASFLGFAAALGYV----LFEP MLBr_02529|M.leprae_Br4923 LASAGVTAWSLIALIVPGPERVRIVAFFTATVVIGVAVMLEAGAALLWQL :* . : *. . : Mflv_4960|M.gilvum_PYR-GCK RLTTAGAVLVVLSLAGLAISPRITIALARLSPSRPAVDDE---------- Mvan_1446|M.vanbaalenii_PYR-1 -PVTAGAALAALSTAALSVAPKLAVVTAGPEP------------------ MSMEG_1535|M.smegmatis_MC2_155 DIQAFGACLGALGIAALSLSPRMSIILAGLTPG-EASPAG---------- TH_3996|M.thermoresistible__bu PTVVIGVLTASLSMAVLAVAPRLSIALAGLTPAPDGGPDAP--------- Rv3448|M.tuberculosis_H37Rv PVPAIGSLATLASFGLLEVSARMAVLLAGLSPRLPPALNP---------- Mb3478|M.bovis_AF2122/97 PVPAIGSLDTLASFGLLEVSARMAVLLAGLSPRLPPALNP---------- MMAR_1101|M.marinum_M ALYVVGSLTTLAALVALEVSARVSMVVAGLSPKLPAAPGS---------- MUL_0859|M.ulcerans_Agy99 ALYVVGSLTTLAALVALEVSARVSMVVAGLSPKLPAAPGS---------- MAV_4391|M.avium_104 PLPAVASAAGLVSLCLLGMAARASLALAGLSPRPATAPAG---------- MAB_3757|M.abscessus_ATCC_1997 PIYSLGAVLGSVGICAVALSPRVAMVLARLPLPPVPTQGAPSRPEHSTAP MLBr_02529|M.leprae_Br4923 TPLTIGCGLILAALLVTVEAAQLSALWARFPLPVIPAPGDP--------- . . :.: : * Mflv_4960|M.gilvum_PYR-GCK -------------------------------EAAAAHTLLTALVAGWSSS Mvan_1446|M.vanbaalenii_PYR-1 ---------------------------------AAAHSTLTGLVAGWSAT MSMEG_1535|M.smegmatis_MC2_155 ---------------------------DVDVVAARGHRILCGLVAGASAA TH_3996|M.thermoresistible__bu --------------------GSLFDDAPAAPRLVRGNAILTGILTGAAVT Rv3448|M.tuberculosis_H37Rv -----------------DDADALPTTDRLTTRANRADAWLTSLLAAFAAS Mb3478|M.bovis_AF2122/97 -----------------DDADALPTTDRLTTRANRADAWLTSLLAAFAAS MMAR_1101|M.marinum_M -----------------EEAPELAAPDLLATRAVRADRWLNGLHGGFSSA MUL_0859|M.ulcerans_Agy99 -----------------EEAPELAAPDLLATRAIRADRWLNGLHGGFSSA MAV_4391|M.avium_104 -----------------GPE---PGEAWVSARARRADRWLTGLLAGLSSS MAB_3757|M.abscessus_ATCC_1997 IEAIEGLDGLDTEGDDVEDATALPPLPDLREKALRAHAVLTGLVCGTSAV MLBr_02529|M.leprae_Br4923 ----------------TPSAPSFQVLEDLPRRVRISSAHQSGFIAAATLL . .: . : Mflv_4960|M.gilvum_PYR-GCK AALGAVVVAAATI-----------VSGASAGLCAGLCVAAGVVLILRRNS Mvan_1446|M.vanbaalenii_PYR-1 AAAGGVTVAAVAG-----------PAESSTILAALFAADLGGLLVLRTRS MSMEG_1535|M.smegmatis_MC2_155 AALGAVLVAAD-------------GCGSVTFAAIAFDAAIGLALLSRGRS TH_3996|M.thermoresistible__bu AVIGTTLIALGGVLVGQAAREPGSGPGGPWWTGPLFTALLAAALVLRARS Rv3448|M.tuberculosis_H37Rv ATIGAIGTAVATHGIHRSS-----------MGGIALAAVTGALLLLRARS Mb3478|M.bovis_AF2122/97 ATIGAIGTAVATHGIHRSS-----------MGGIALAAVTGALLLLRARS MMAR_1101|M.marinum_M AALGAV---VAVLGSQR---------------AIGLTAVTGAVLLLRARA MUL_0859|M.ulcerans_Agy99 AALGAV---VAVFGSQR---------------AIGLTAVTGAVLLLRARA MAV_4391|M.avium_104 ATVGAA--VTVLAGAPR-------------LCCLAFGTGTGALLLLRSRG MAB_3757|M.abscessus_ATCC_1997 TAVGAMLAALTFSGAGGHHP-----TGAHRLSGVVLAGLIALAMMLRARS MLBr_02529|M.leprae_Br4923 SMLGSVAIALRPEAVSS--------------VGWYLVAATAVAATLRARV : * : . * . Mflv_4960|M.gilvum_PYR-GCK HADGVRRLWLGTSGFIACAAAVPAVADA----APAQAFWLSVAVAGGC-- Mvan_1446|M.vanbaalenii_PYR-1 HVVVHRRIALGAAGSVSLLAAFTVTVVA----APVHAPWLCACAAVLC-- MSMEG_1535|M.smegmatis_MC2_155 HASGRCRTVLGVTGFCALTAMFVLVVAW----SPPYGNWVGAAAVAVG-- TH_3996|M.thermoresistible__bu HADALRRGVLVGCGVGCATMAFTAVVIE----HPGQASAWGALAVAIG-- Rv3448|M.tuberculosis_H37Rv -ADTRRSLVFAICGITTVATAFTVAADR----ALEHGPWIAALTAMLAAV Mb3478|M.bovis_AF2122/97 -ADTRRSLVFAICGITTVATAFTVAADR----ALEHGPWIAALTAMLAAV MMAR_1101|M.marinum_M QVDGRSRLMFLIAGYVAGTAAFAVAAPG----LAQHGPWIAILTAALTAL MUL_0859|M.ulcerans_Agy99 QVDGRSRLMFLIAGYVAGTAAFAVAAPG----LAQHGPWIAILTAALTAL MAV_4391|M.avium_104 -GDGTRALVFAAGGIVTTATTFGVAAWS----APLPGPWVAATTATLVAA MAB_3757|M.abscessus_ATCC_1997 HADLAQTVAINLGGIAIPAAAFAFVAVA----YPTAAVFTTVLAAIAAGS MLBr_02529|M.leprae_Br4923 WDSVACKAWLLAQPYLVASVLLGLYTATGRYVAASAALLVLVVVVLAWAV : . . . .. Mflv_4960|M.gilvum_PYR-GCK VAGALRAGRPEPSNPALRHGIQVLEYVALAAVIPLAFWVSGVYGLVRDAS Mvan_1446|M.vanbaalenii_PYR-1 VLAVRGAGSPASPNPLAHRMIQVTEYAALVALVPLAFWVSGIYGLVRQLS MSMEG_1535|M.smegmatis_MC2_155 LAAMCSLGPASLTNAGILRIADAAEYVALAAVAPLACWLAGIFDAVRGFG TH_3996|M.thermoresistible__bu LVAAGGR-PSAPVSPLIRRAADVAECVVLAALAPLACWVAGVYGLVRGLA Rv3448|M.tuberculosis_H37Rv AMFLGFVAPALSLSPVTYRTIELLECLALIAMVPLTAWLCGAYSAVRHLD Mb3478|M.bovis_AF2122/97 AMFLGFVAPALSLSPVTYRTIELLECLALIAMVPLTAWLCGAYSAVRHLD MMAR_1101|M.marinum_M ALHLGFIAPTRPPSPIACRLIDALEFSASASLLPLACWTCGVFSAVGGLG MUL_0859|M.ulcerans_Agy99 ALHLGFIAPTRPPSPIACRLIDALEFSASASLLPLACWTCGVFSAVGGLG MAV_4391|M.avium_104 ALYLGCAP--RTCSPVLSRAADLLEWLALAALVPLTCWIAGLYGTVRGLT MAB_3757|M.abscessus_ATCC_1997 AIALGFLVSARKYSPVARRTVEIIEYIALSLIVPIAVWVCGVYSAVRGLN MLBr_02529|M.leprae_Br4923 VALNPRIASSDSYSLPLRRLLGMVASGLDASLIPAMAYLVSLFSWVLNR- . : : * : . :. * Mflv_4960|M.gilvum_PYR-GCK LL-- Mvan_1446|M.vanbaalenii_PYR-1 LA-- MSMEG_1535|M.smegmatis_MC2_155 M--- TH_3996|M.thermoresistible__bu LW-- Rv3448|M.tuberculosis_H37Rv LTWT Mb3478|M.bovis_AF2122/97 LTWT MMAR_1101|M.marinum_M LTWT MUL_0859|M.ulcerans_Agy99 LTWT MAV_4391|M.avium_104 LG-- MAB_3757|M.abscessus_ATCC_1997 LP-- MLBr_02529|M.leprae_Br4923 ----