For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTAAVDGKGPAAMNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRVCPTSLELFSRPDMQLRSTDPDGRE LILSCGVALHHCVVALASLGWQAKVNRFPDPKDRCHLATIGVQPLVPDQADVALAAAIPRRRTDRRAYSC WPVPGGDIALMAARAARGGVMLRQVSALDRMKAIVAQAVLDHVTDEEYLRELTIWSGRYGSVAGVPARNE PPSDPSAPIPGRLFAGPGLSQPSDVLPADDGAAILALGTETDDRLARLRAGEAASIVLLTATAMGLACCP ITEPLEIAKTRDAVRAEVFGAGGYPQMLLRVGWAPINADPLPPTPRRELSQVVEWPEELLRQRC
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv3131 | - | - | 100% (332) | hypothetical protein Rv3131 |
| M. tuberculosis H37Rv | Rv2032 | acg | 9e-40 | 35.94% (320) | hypothetical protein Rv2032 |
| M. tuberculosis H37Rv | Rv3127 | - | 6e-36 | 34.76% (328) | hypothetical protein Rv3127 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3155 | - | 0.0 | 100.00% (332) | hypothetical protein Mb3155 |
| M. gilvum PYR-GCK | Mflv_3848 | - | 1e-115 | 63.24% (321) | hypothetical protein Mflv_3848 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3903 | - | 2e-42 | 37.08% (329) | hypothetical protein MAB_3903 |
| M. marinum M | MMAR_1518 | - | 1e-146 | 75.53% (331) | hypothetical protein MMAR_1518 |
| M. avium 104 | MAV_4111 | - | 1e-122 | 66.25% (323) | hypothetical protein MAV_4111 |
| M. smegmatis MC2 155 | MSMEG_3955 | - | 1e-121 | 62.54% (323) | hypothetical protein MSMEG_3955 |
| M. thermoresistible (build 8) | TH_0558 | - | 6e-50 | 61.90% (147) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_2421 | - | 1e-144 | 74.92% (331) | hypothetical protein MUL_2421 |
| M. vanbaalenii PYR-1 | Mvan_2547 | - | 1e-119 | 64.80% (321) | hypothetical protein Mvan_2547 |
CLUSTAL 2.0.9 multiple sequence alignment
Rv3131|M.tuberculosis_H37Rv ----------------MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRV
Mb3155|M.bovis_AF2122/97 ----------------MNTHFPDAETVRTVLTLAVRAPSIHNTQPWRWRV
MMAR_1518|M.marinum_M ----------------MNAQFPDVGTLRTVLTLATRAPSIHNTQPWRWQV
MUL_2421|M.ulcerans_Agy99 MTYDSDGTACLTGKAAMNAQFPDVGTLRTVLTLATRAPSIHNTQPWRWQV
MAV_4111|M.avium_104 ----------------MNTGFPDPETVRTALALASRAPSVHNTQPWRWRI
Mflv_3848|M.gilvum_PYR-GCK ----------------MNAHFPDAETLRSALSLANRAPSVHNSQPWQWRV
Mvan_2547|M.vanbaalenii_PYR-1 ----------------MTTNFPDSVTLRSALSLANRAPSVHNSQPWQWRV
MSMEG_3955|M.smegmatis_MC2_155 ----------------MNTHFPDTETIHAALALAMRAPSIHNSQPWQWRV
TH_0558|M.thermoresistible__bu ------------------------------LALAVRAPSVHNSQPWRWRV
MAB_3903|M.abscessus_ATCC_1997 ----------------MPKTMVHIDVIQTAIQLACRAPSLHNTQPWRWIV
: ** ****:**:***:* :
Rv3131|M.tuberculosis_H37Rv CP----TSLELFSRPDMQLRSTDPDGRELILSCGVALHHCVVALASLGWQ
Mb3155|M.bovis_AF2122/97 CP----TSLELFSRPDMQLRSTDPDGRELILSCGVALHHCVVALASLGWQ
MMAR_1518|M.marinum_M TS----RSLELFSEPDMQLHSTDPDGRDLIISCGVALHHCVVALASMGWQ
MUL_2421|M.ulcerans_Agy99 TS----RSLELFPEPDMQLHSTDPDGRDLIISCGVALHHCVVALASMGWQ
MAV_4111|M.avium_104 DP----AGLHLYADPARQLPHTDPDGRDLILSCGIALQHCVTAFAAVGWR
Mflv_3848|M.gilvum_PYR-GCK GH----ESVHLYANPDLLLPHTDPDARDLMLSCGAALHHCVVALAALGWQ
Mvan_2547|M.vanbaalenii_PYR-1 GD----HSLHLFANPDLLLPHIDPDARDFMLSCGTALNHCVVALAALGWQ
MSMEG_3955|M.smegmatis_MC2_155 GE----RSVHLYADLDRHLTSTDPDSRDLLLSCGAALHHCVIAFAALGWY
TH_0558|M.thermoresistible__bu GT----ESLHLWADPEHHLPSIDPDRRDLLVSCGAALNHCIIALAALGWQ
MAB_3903|M.abscessus_ATCC_1997 DLGASAGDLHLYLDRTRCVTRTDGAGREAIISCGAALDHFRVAMASAGWM
.:.*: : * *: ::*** **.* *:*: **
Rv3131|M.tuberculosis_H37Rv AKVNRFPDPKDRCHLATIGVQPLVPDQA-DVALAAAIPRRRTDRRAYSCW
Mb3155|M.bovis_AF2122/97 AKVNRFPDPKDRCHLATIGVQPLVPDQA-DVALAAAIPRRRTDRRAYSCW
MMAR_1518|M.marinum_M ATVTRIPDPDNSRHLASLELQAKPPDQG-DIALAAAIPRRRTDRRAYSSW
MUL_2421|M.ulcerans_Agy99 ATVTRIPDPDNSRHLASLELQAKPPDQG-DIALAAAIPRRRTDWRAYSSW
MAV_4111|M.avium_104 SRVRRLPDPDDPDHLATLEFSPQTADYV-DVALAAAIPRRRTDRRHYSCW
Mflv_3848|M.gilvum_PYR-GCK AKIHRFPNPAEPDHLAALELRRYPAADL-DVTLAAAIPRRRTDRRYYSSW
Mvan_2547|M.vanbaalenii_PYR-1 SKVHRFPNPADPNHVAAIQVHRYPAAEL-DITLAAAIPRRRTDRRHYSPW
MSMEG_3955|M.smegmatis_MC2_155 ASVHRLPNPAEPEHLASIELRRQTPTDL-DIALAAAIPRRRTDRRHYSAW
TH_0558|M.thermoresistible__bu AKVHRFPNPAEPLHLASLELSVHKPTEA-EVSLAAAIPRRRTDRRLYSNW
MAB_3903|M.abscessus_ATCC_1997 TRIERIPDPDNPDHLAAITFSPRTVVVVGDRRRADAILQRRTDRLPFETP
: : *:*:* : *:*:: . : * ** :**** :.
Rv3131|M.tuberculosis_H37Rv PVPGGDIALMAARAARGGVMLRQVSALDR--MKAIVAQAVLDHVTDEEYL
Mb3155|M.bovis_AF2122/97 PVPGGDIALMAARAARGGVMLRQVSALDR--MKAIVAQAVLDHVTDEEYL
MMAR_1518|M.marinum_M PVAAGDIAQMAARVARCDVALRQVEALDK--MREVVAQAVWDHATNDEYM
MUL_2421|M.ulcerans_Agy99 PVAAGDIAQMAARVARCDVALRQVEALDK--MREVVAQAVWDHATNDEYM
MAV_4111|M.avium_104 PVPVGDIALMAARAARAGVTLYQVQDVGG--LHDIVAQSIRDHLT-KDYL
Mflv_3848|M.gilvum_PYR-GCK PVPQGDVALMGARAARAGVALRRVDDLAG--LKRLVSAAAFQHRTDAGYL
Mvan_2547|M.vanbaalenii_PYR-1 PVPRGDIALMGARAARAGVMLRRVDDLDA--LKRLVNEAAFQHQSDQGYL
MSMEG_3955|M.smegmatis_MC2_155 PVSHSDIAMMGARAARAGVMLRRVESLSR--LQDIVAESIARHAADDGYL
TH_0558|M.thermoresistible__bu PVPFGDIALMGARAARAGVRLLRVEDLDH--VRSAX--------------
MAB_3903|M.abscessus_ATCC_1997 PNWSQFARMLNTVIADRAVLLDVIDDVMRPKLADASALSDALRIYDSAYQ
* : : * * * :. : :
Rv3131|M.tuberculosis_H37Rv RELTIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPAD
Mb3155|M.bovis_AF2122/97 RELTIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDVLPAD
MMAR_1518|M.marinum_M RELTTWSGRYGAVAGVPARNTPPSDQDAPIPGRLFAGPGLAQPSGVSPAA
MUL_2421|M.ulcerans_Agy99 RELTTWSGRYGAVAGVPARNTPPSDQDAPIPGRLFAGPGLAQPSGVSPAA
MAV_4111|M.avium_104 AELTTWSGRYFSVSGVPARNTPFPDPAAKIPTRLFAGAALPMAPGSSAGD
Mflv_3848|M.gilvum_PYR-GCK TELAAWSGRYAATAGVPARSVP-AETAGAVSARAFAGGVLPQTPDTAADQ
Mvan_2547|M.vanbaalenii_PYR-1 AELATWSGRYASTAGVPARNVPDGDGTGPIPLRAFAGGVLPQTPNTEPAD
MSMEG_3955|M.smegmatis_MC2_155 RELTAWSGKYASTAGVPARSAPKPEPGAPLSSRMFAGAALKQPDTGAGAD
TH_0558|M.thermoresistible__bu ------------XXGCTSRFR-----------------------------
MAB_3903|M.abscessus_ATCC_1997 TELDWWTAPFTLEDGVPRSALVSAADSDRVDIGRTFPVVAERASRPGLQE
* .
Rv3131|M.tuberculosis_H37Rv DGAAILALGTETDDRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAK
Mb3155|M.bovis_AF2122/97 DGAAILALGTETDDRLARLRAGEAASIVLLTATAMGLACCPITEPLEIAK
MMAR_1518|M.marinum_M DSAVILALGTEEDDRASRLRAGEATSAVLLTATAMGLASCPITEPLEVHK
MUL_2421|M.ulcerans_Agy99 DSAVILALGTEEDDRASRLRAGEATSAVLLTATAMGLASCPITEPLEVHK
MAV_4111|M.avium_104 DNAVVLALGTRHDDRLARLRAGEATGVVLLTATSAGLASCPVTEPLETPQ
Mflv_3848|M.gilvum_PYR-GCK DNAVVLALGTAGDDRLSWLRAGEATSVVLLTATALGLASCPITEPLEIAE
Mvan_2547|M.vanbaalenii_PYR-1 DNAAVLALGTVEDDRLSWLRAGEATSIVLLTATALGLACCPITEPLEIAD
MSMEG_3955|M.smegmatis_MC2_155 EGAVVLALGTADDTRMSRLRAGEATSLILLTATAMGLATCPVTEPLEISE
TH_0558|M.thermoresistible__bu --------------RPTRRRR--------TRAVSHG----------EAGD
MAB_3903|M.abscessus_ATCC_1997 DQAKVLALSTARDTPKNLLRCGELLSEVLLEATLAGMATCTITHMLELTA
* *. * *
Rv3131|M.tuberculosis_H37Rv TRDAVRAEVFGAGGYPQMLLRVGWAPINADPLPPTPRRELSQVVEWPEEL
Mb3155|M.bovis_AF2122/97 TRDAVRAEVFGAGGYPQMLLRVGWAPINADPLPPTPRRELSQVVEWPEEL
MMAR_1518|M.marinum_M TRQAIRKDVFGGSAYPQMLLRVGWAPINADPLPATPRRNLSRVVEWPEQL
MUL_2421|M.ulcerans_Agy99 TRQAIRKDVFGGSAYPQMLLRVGWAPINADPLPATPRRNLSRVVEWPEQL
MAV_4111|M.avium_104 TRAAVRADIFGDGHHPQMLLRVGWAPINADPLPATPRRDLADFVEWVG--
Mflv_3848|M.gilvum_PYR-GCK TREAVRRDVFGADGYPQMLLRVGWAPVNADPLPSTPRRNLSEVVVRLDDS
Mvan_2547|M.vanbaalenii_PYR-1 TREAVRRDVFGTDGHPQMLLRVGWAPVNADPLPATPRRDVTEVIAHLDGS
MSMEG_3955|M.smegmatis_MC2_155 TRDAVQAEVFGASAFPQMMLRVGWAPVNADPLPPTPRRHVADAVRWLDGS
TH_0558|M.thermoresistible__bu NREKNHSPWWASN-----LAVRGWLGN-----LVFTRRGVEQLGSSLGS-
MAB_3903|M.abscessus_ATCC_1997 SREVVGAAIGRSH--PQALIRVGLAPTFGRIPPPTPRRSLADVFEIRS--
.* : * .** :
Rv3131|M.tuberculosis_H37Rv LRQRC--
Mb3155|M.bovis_AF2122/97 LRQRC--
MMAR_1518|M.marinum_M LDERG--
MUL_2421|M.ulcerans_Agy99 LDERG--
MAV_4111|M.avium_104 -------
Mflv_3848|M.gilvum_PYR-GCK SAE----
Mvan_2547|M.vanbaalenii_PYR-1 PIA----
MSMEG_3955|M.smegmatis_MC2_155 PFEPESE
TH_0558|M.thermoresistible__bu -------
MAB_3903|M.abscessus_ATCC_1997 -------