For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_3955 (-)

annotation: hypothetical protein MSMEG_3955
coordinates: 4025793 - 4026797
length: 334

NTHFPDTETIHAALALAMRAPSIHNSQPWQWRVGERSVHLYADLDRHLTSTDPDSRDLLLSCGAALHHCV
IAFAALGWYASVHRLPNPAEPEHLASIELRRQTPTDLDIALAAAIPRRRTDRRHYSAWPVSHSDIAMMGA
RAARAGVMLRRVESLSRLQDIVAESIARHAADDGYLRELTAWSGKYASTAGVPARSAPKPEPGAPLSSRM
FAGAALKQPDTGAGADEGAVVLALGTADDTRMSRLRAGEATSLILLTATAMGLATCPVTEPLEISETRDA
VQAEVFGASAFPQMMLRVGWAPVNADPLPPTPRRHVADAVRWLDGSPFEPESE*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_3955--100% (334)hypothetical protein MSMEG_3955
M. smegmatis MC2 155MSMEG_3952-2e-4338.32% (321) hypothetical protein MSMEG_3952
M. smegmatis MC2 155MSMEG_3943-3e-4237.38% (313) hypothetical protein MSMEG_3943

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3155-1e-12162.54% (323) hypothetical protein Mb3155
M. gilvum PYR-GCKMflv_3848-1e-12867.37% (331) hypothetical protein Mflv_3848
M. tuberculosis H37RvRv3131-1e-12162.54% (323) hypothetical protein Rv3131
M. leprae Br4923MLBr_01751-8e-0624.37% (316) hypothetical protein MLBr_01751
M. abscessus ATCC 19977MAB_3903-4e-4737.62% (319) hypothetical protein MAB_3903
M. marinum MMMAR_3502-1e-12463.58% (324) hypothetical protein MMAR_3502
M. avium 104MAV_2502-1e-12062.35% (324) hypothetical protein MAV_2502
M. thermoresistible (build 8)TH_0558-4e-5769.86% (146) CONSERVED HYPOTHETICAL PROTEIN
M. ulcerans Agy99MUL_2421-1e-11558.82% (323) hypothetical protein MUL_2421
M. vanbaalenii PYR-1Mvan_2547-1e-12262.80% (328) hypothetical protein Mvan_2547

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_3848|M.gilvum_PYR-GCK          --------------------------------------------------
Mvan_2547|M.vanbaalenii_PYR-1       --------------------------------------------------
MSMEG_3955|M.smegmatis_MC2_155      --------------------------------------------------
Mb3155|M.bovis_AF2122/97            --------------------------------------------------
Rv3131|M.tuberculosis_H37Rv         --------------------------------------------------
MUL_2421|M.ulcerans_Agy99           --------------------------------------------------
MMAR_3502|M.marinum_M               --------------------------------------------------
MAV_2502|M.avium_104                --------------------------------------------------
TH_0558|M.thermoresistible__bu      --------------------------------------------------
MAB_3903|M.abscessus_ATCC_1997      --------------------------------------------------
MLBr_01751|M.leprae_Br4923          MAYGCNPRGAARVSDERDVSPYARVLALDDPADAAVLQRLRADSKVDFVD
                                                                                      

Mflv_3848|M.gilvum_PYR-GCK          --------------------------------------------------
Mvan_2547|M.vanbaalenii_PYR-1       --------------------------------------------------
MSMEG_3955|M.smegmatis_MC2_155      --------------------------------------------------
Mb3155|M.bovis_AF2122/97            --------------------------------------------------
Rv3131|M.tuberculosis_H37Rv         --------------------------------------------------
MUL_2421|M.ulcerans_Agy99           --------------------------------------------------
MMAR_3502|M.marinum_M               --------------------------------------------------
MAV_2502|M.avium_104                --------------------------------------------------
TH_0558|M.thermoresistible__bu      --------------------------------------------------
MAB_3903|M.abscessus_ATCC_1997      --------------------------------------------------
MLBr_01751|M.leprae_Br4923          HHERQLQELLSLLPTPDPQLIAEPCRWVYYPWRHVVVSMLGPRGFRAVRL
                                                                                      

Mflv_3848|M.gilvum_PYR-GCK          --------------------------------------------------
Mvan_2547|M.vanbaalenii_PYR-1       --------------------------------------------------
MSMEG_3955|M.smegmatis_MC2_155      --------------------------------------------------
Mb3155|M.bovis_AF2122/97            --------------------------------------------------
Rv3131|M.tuberculosis_H37Rv         --------------------------------------------------
MUL_2421|M.ulcerans_Agy99           --------------------------------------------------
MMAR_3502|M.marinum_M               --------------------------------------------------
MAV_2502|M.avium_104                --------------------------------------------------
TH_0558|M.thermoresistible__bu      --------------------------------------------------
MAB_3903|M.abscessus_ATCC_1997      --------------------------------------------------
MLBr_01751|M.leprae_Br4923          DRNRNEITAEEQVALGRLHIGVAGLSVGHVIAHTLAAQGLCGQLRLADFD
                                                                                      

Mflv_3848|M.gilvum_PYR-GCK          --------------------------------------------------
Mvan_2547|M.vanbaalenii_PYR-1       --------------------------------------------------
MSMEG_3955|M.smegmatis_MC2_155      --------------------------------------------------
Mb3155|M.bovis_AF2122/97            --------------------------------------------------
Rv3131|M.tuberculosis_H37Rv         --------------------------------------------------
MUL_2421|M.ulcerans_Agy99           --------------------------------------------------
MMAR_3502|M.marinum_M               --------------------------------------------------
MAV_2502|M.avium_104                --------------------------------------------------
TH_0558|M.thermoresistible__bu      --------------------------------------------------
MAB_3903|M.abscessus_ATCC_1997      --------------------------------------------------
MLBr_01751|M.leprae_Br4923          RLELSNLNRVPATVFDLGLNKAEVAARRIAELDPYLTVRVFDNGLTFDTV
                                                                                      

Mflv_3848|M.gilvum_PYR-GCK          --------------------------------------------------
Mvan_2547|M.vanbaalenii_PYR-1       --------------------------------------------------
MSMEG_3955|M.smegmatis_MC2_155      --------------------------------------------------
Mb3155|M.bovis_AF2122/97            --------------------------------------------------
Rv3131|M.tuberculosis_H37Rv         --------------------------------------------------
MUL_2421|M.ulcerans_Agy99           --------------------------------------------------
MMAR_3502|M.marinum_M               --------------------------------------------------
MAV_2502|M.avium_104                --------------------------------------------------
TH_0558|M.thermoresistible__bu      --------------------------------------------------
MAB_3903|M.abscessus_ATCC_1997      --------------------------------------------------
MLBr_01751|M.leprae_Br4923          DQFLEGLDVVVEQCDSLDIKALLREGARSHGIPVLMATSDRGLIDVERFD
                                                                                      

Mflv_3848|M.gilvum_PYR-GCK          --------------------------------------------------
Mvan_2547|M.vanbaalenii_PYR-1       --------------------------------------------------
MSMEG_3955|M.smegmatis_MC2_155      --------------------------------------------------
Mb3155|M.bovis_AF2122/97            --------------------------------------------------
Rv3131|M.tuberculosis_H37Rv         --------------------------------------------------
MUL_2421|M.ulcerans_Agy99           --------------------------------------------------
MMAR_3502|M.marinum_M               --------------------------------------------------
MAV_2502|M.avium_104                --------------------------------------------------
TH_0558|M.thermoresistible__bu      --------------------------------------------------
MAB_3903|M.abscessus_ATCC_1997      --------------------------------------------------
MLBr_01751|M.leprae_Br4923          LEPRRSILHGLLGELDIRLLPEMSNREKIPYILRFLEAERLSPRTATTLV
                                                                                      

Mflv_3848|M.gilvum_PYR-GCK          --------------------------------------------------
Mvan_2547|M.vanbaalenii_PYR-1       --------------------------------------------------
MSMEG_3955|M.smegmatis_MC2_155      --------------------------------------------------
Mb3155|M.bovis_AF2122/97            --------------------------------------------------
Rv3131|M.tuberculosis_H37Rv         --------------------------------------------------
MUL_2421|M.ulcerans_Agy99           ----------------------------------------MTYDSDGTAC
MMAR_3502|M.marinum_M               --------------------------------------------------
MAV_2502|M.avium_104                --------------------------------------------------
TH_0558|M.thermoresistible__bu      --------------------------------------------------
MAB_3903|M.abscessus_ATCC_1997      --------------------------------------------------
MLBr_01751|M.leprae_Br4923          EIDRSLSTWPQLAGDVALGATAVAEAVRRIGLGEELRSGRARIDVASALN
                                                                                      

Mflv_3848|M.gilvum_PYR-GCK          ------MNAHFPDAETLRSALSLA----------NRAPSVHNSQPWQWRV
Mvan_2547|M.vanbaalenii_PYR-1       ------MTTNFPDSVTLRSALSLA----------NRAPSVHNSQPWQWRV
MSMEG_3955|M.smegmatis_MC2_155      ------MNTHFPDTETIHAALALA----------MRAPSIHNSQPWQWRV
Mb3155|M.bovis_AF2122/97            ------MNTHFPDAETVRTVLTLA----------VRAPSIHNTQPWRWRV
Rv3131|M.tuberculosis_H37Rv         ------MNTHFPDAETVRTVLTLA----------VRAPSIHNTQPWRWRV
MUL_2421|M.ulcerans_Agy99           LTGKAAMNAQFPDVGTLRTVLTLA----------TRAPSIHNTQPWRWQV
MMAR_3502|M.marinum_M               ------MNAHFPDAGTVRTVLTLA----------SRAPSVHNTQPWRWQV
MAV_2502|M.avium_104                ------MTNRFPDEGTIRTVLALA----------SRAPSVHNTQPWRWLV
TH_0558|M.thermoresistible__bu      --------------------LALA----------VRAPSVHNSQPWRWRV
MAB_3903|M.abscessus_ATCC_1997      ------MPKTMVHIDVIQTAIQLA----------CRAPSLHNTQPWRWIV
MLBr_01751|M.leprae_Br4923          QLTEPDMARHRPANPTQCSELALSGIEGVIATAAIRAPSGGNLQPWHIDA
                                                        : *:           ****  * ***:  .

Mflv_3848|M.gilvum_PYR-GCK          GH----ESVHLYANPDLLLPHTDPDARDLMLSCGAALHHCVVALAALGWQ
Mvan_2547|M.vanbaalenii_PYR-1       GD----HSLHLFANPDLLLPHIDPDARDFMLSCGTALNHCVVALAALGWQ
MSMEG_3955|M.smegmatis_MC2_155      GE----RSVHLYADLDRHLTSTDPDSRDLLLSCGAALHHCVIAFAALGWY
Mb3155|M.bovis_AF2122/97            CP----TSLELFSRPDMQLRSTDPDGRELILSCGVALHHCVVALASLGWQ
Rv3131|M.tuberculosis_H37Rv         CP----TSLELFSRPDMQLRSTDPDGRELILSCGVALHHCVVALASLGWQ
MUL_2421|M.ulcerans_Agy99           TS----RSLELFPEPDMQLHSTDPDGRDLIISCGVALHHCVVALASMGWQ
MMAR_3502|M.marinum_M               GA----TTLHLYADTSLQLPNTDPEGRDLISSCGAALNHCVIALAAVGWH
MAV_2502|M.avium_104                GQ----ESLHLYADGGRQLPNTDPDGRDLILSCGAALHHCVVGFAAVGWQ
TH_0558|M.thermoresistible__bu      GT----ESLHLWADPEHHLPSIDPDRRDLLVSCGAALNHCIIALAALGWQ
MAB_3903|M.abscessus_ATCC_1997      DLGASAGDLHLYLDRTRCVTRTDGAGREAIISCGAALDHFRVAMASAGWM
MLBr_01751|M.leprae_Br4923          GP-----DALVIRIAPEHTDSLDVGFRGSAVAVGAALFNARVAAAAHGVL
                                              :           *   *    : *.** :  :. *: *  

Mflv_3848|M.gilvum_PYR-GCK          AKIHRFPNPAEPDHLAALELRRYPAADL-DVTLAAAIPRRRTDRRYYSSW
Mvan_2547|M.vanbaalenii_PYR-1       SKVHRFPNPADPNHVAAIQVHRYPAAEL-DITLAAAIPRRRTDRRHYSPW
MSMEG_3955|M.smegmatis_MC2_155      ASVHRLPNPAEPEHLASIELRRQTPTDL-DIALAAAIPRRRTDRRHYSAW
Mb3155|M.bovis_AF2122/97            AKVNRFPDPKDRCHLATIGVQPLVPDQA-DVALAAAIPRRRTDRRAYSCW
Rv3131|M.tuberculosis_H37Rv         AKVNRFPDPKDRCHLATIGVQPLVPDQA-DVALAAAIPRRRTDRRAYSCW
MUL_2421|M.ulcerans_Agy99           ATVTRIPDPDNSRHLASLELQAKPPDQG-DIALAAAIPRRRTDWRAYSSW
MMAR_3502|M.marinum_M               AKVARLPNPADPTHLAALEVSRHTPDQL-NITLAAAIPRRRTDRRHYSFW
MAV_2502|M.avium_104                ARVTRLPNPADPDHLAAIELSGGTADPV-DIALAAAIPRRRTDRRHYSSW
TH_0558|M.thermoresistible__bu      AKVHRFPNPAEPLHLASLELSVHKPTEA-EVSLAAAIPRRRTDRRLYSNW
MAB_3903|M.abscessus_ATCC_1997      TRIERIPDPDNPDHLAAITFSPRTVVVVGDRRRADAILQRRTDRLPFETP
MLBr_01751|M.leprae_Br4923          GPVSLAENVDGAPLRVTLSLGDGWNPDL--AAVYEPMLVRETNRNHGKPT
                                      :    :       .:: .               .:  *.*:    .  

Mflv_3848|M.gilvum_PYR-GCK          PVPQGDVALMGARAARAGVALRRVDDLAG------LKRLVSAAAFQHRTD
Mvan_2547|M.vanbaalenii_PYR-1       PVPRGDIALMGARAARAGVMLRRVDDLDA------LKRLVNEAAFQHQSD
MSMEG_3955|M.smegmatis_MC2_155      PVSHSDIAMMGARAARAGVMLRRVESLSR------LQDIVAESIARHAAD
Mb3155|M.bovis_AF2122/97            PVPGGDIALMAARAARGGVMLRQVSALDR------MKAIVAQAVLDHVTD
Rv3131|M.tuberculosis_H37Rv         PVPGGDIALMAARAARGGVMLRQVSALDR------MKAIVAQAVLDHVTD
MUL_2421|M.ulcerans_Agy99           PVAAGDIAQMAARVARCDVALRQVEALDK------MREVVAQAVWDHATN
MMAR_3502|M.marinum_M               PVPVSDVALMAARAARCGVSLRQVDATDK------LNAIVAKSVWDHAAD
MAV_2502|M.avium_104                PVPVGDIALMAARAARNGVTLCQVEDADK------LHEIVKQSVWDHMN-
TH_0558|M.thermoresistible__bu      PVPFGDIALMGARAARAGVRLLRVEDLDH------VRSAXXX--------
MAB_3903|M.abscessus_ATCC_1997      PNWSQFARMLNTVIADRAVLLDVIDDVMRPK----LADASALSDALRIYD
MLBr_01751|M.leprae_Br4923          MVLTETIDVLHAAAVAEGARLHLLTARDDIVRAATILAAADRSRYLTPRL
                                             : :  .   . *  :           :              

Mflv_3848|M.gilvum_PYR-GCK          AGYLTELAAWSGRYAATAGVPARSVP-AETAGAVSARAFAGGVLPQTPDT
Mvan_2547|M.vanbaalenii_PYR-1       QGYLAELATWSGRYASTAGVPARNVPDGDGTGPIPLRAFAGGVLPQTPNT
MSMEG_3955|M.smegmatis_MC2_155      DGYLRELTAWSGKYASTAGVPARSAPKPEPGAPLSSRMFAGAALKQPDTG
Mb3155|M.bovis_AF2122/97            EEYLRELTIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDV
Rv3131|M.tuberculosis_H37Rv         EEYLRELTIWSGRYGSVAGVPARNEPPSDPSAPIPGRLFAGPGLSQPSDV
MUL_2421|M.ulcerans_Agy99           DEYMRELTTWSGRYGAVAGVPARNTPPSDQDAPIPGRLFAGPGLAQPSGV
MMAR_3502|M.marinum_M               DEYLAELNAWSGRHASASGVPARNTPVSDPAAPLPSRLFAGSTLAMPADA
MAV_2502|M.avium_104                RDYLVELAAWSGRYAAVAGVPARNTPKSDPGAKIPGRLFAGPMLAMPSGS
TH_0558|M.thermoresistible__bu      ------------------GCTSRFR-------------------------
MAB_3903|M.abscessus_ATCC_1997      SAYQTELDWWTAPFTLEDGVPRSALVSAADSDRVDIGRTFPVVAERASRP
MLBr_01751|M.leprae_Br4923          HEEMISELRWPGDSFPDTGIDVRSLEMDWHQLAAFDVLRRTDVMELLAQW
                                                      *                               

Mflv_3848|M.gilvum_PYR-GCK          AA-----------DQDNAVVLALGTAGDDRLSWLRAGEATSVVLLTATAL
Mvan_2547|M.vanbaalenii_PYR-1       EP-----------ADDNAAVLALGTVEDDRLSWLRAGEATSIVLLTATAL
MSMEG_3955|M.smegmatis_MC2_155      AG-----------ADEGAVVLALGTADDTRMSRLRAGEATSLILLTATAM
Mb3155|M.bovis_AF2122/97            LP-----------ADDGAAILALGTETDDRLARLRAGEAASIVLLTATAM
Rv3131|M.tuberculosis_H37Rv         LP-----------ADDGAAILALGTETDDRLARLRAGEAASIVLLTATAM
MUL_2421|M.ulcerans_Agy99           SP-----------AADSAVILALGTEEDDRASRLRAGEATSAVLLTATAM
MMAR_3502|M.marinum_M               AP-----------ADDNAVMLALGTRTDDRLAQLRAGEATSVVLLTATAM
MAV_2502|M.avium_104                SA-----------AEDNSVLLALGTRGDDRLARLRAGEATSMVLLTATSM
TH_0558|M.thermoresistible__bu      -----------------------------RPTRRRRTRAVSHG-------
MAB_3903|M.abscessus_ATCC_1997      GL-----------QEDQAKVLALSTARDTPKNLLRCGELLSEVLLEATLA
MLBr_01751|M.leprae_Br4923          NVGAALGQDTHDRVVASSALAVISVPGHALADYARGGSAVEAIWVAAQRY
                                                                      *     .         

Mflv_3848|M.gilvum_PYR-GCK          GLASCPITEPLEIAETR---EAVRRDVFGADGYPQMLLRVGWAPVNADPL
Mvan_2547|M.vanbaalenii_PYR-1       GLACCPITEPLEIADTR---EAVRRDVFGTDGHPQMLLRVGWAPVNADPL
MSMEG_3955|M.smegmatis_MC2_155      GLATCPVTEPLEISETR---DAVQAEVFGASAFPQMMLRVGWAPVNADPL
Mb3155|M.bovis_AF2122/97            GLACCPITEPLEIAKTR---DAVRAEVFGAGGYPQMLLRVGWAPINADPL
Rv3131|M.tuberculosis_H37Rv         GLACCPITEPLEIAKTR---DAVRAEVFGAGGYPQMLLRVGWAPINADPL
MUL_2421|M.ulcerans_Agy99           GLASCPITEPLEVHKTR---QAIRKDVFGGSAYPQMLLRVGWAPINADPL
MMAR_3502|M.marinum_M               GLASCPVTEPLEIAETR---ESVRTDVFGNNDYPQMLLRVGWAPINADPL
MAV_2502|M.avium_104                GLASCPVTEPLEVADTR---EAVRTEIFGGSNYPQMLLRIGWPPINADPL
TH_0558|M.thermoresistible__bu      -----------EAGDNR---EKNHSPWWASN-----LAVRGWLGN----L
MAB_3903|M.abscessus_ATCC_1997      GMATCTITHMLELTASR---EVVG--AAIGRSHPQALIRVGLAPTFGRIP
MLBr_01751|M.leprae_Br4923          GFAVQPISPVFLYAHSVDELHALSAQFADELGQLGKDFRSLARIPADNSL
                                                   .    .                             

Mflv_3848|M.gilvum_PYR-GCK          PSTPRRNLSEVVVRLDDSSAE-------
Mvan_2547|M.vanbaalenii_PYR-1       PATPRRDVTEVIAHLDGSPIA-------
MSMEG_3955|M.smegmatis_MC2_155      PPTPRRHVADAVRWLDGSPFEPESE---
Mb3155|M.bovis_AF2122/97            PPTPRRELSQVVEWPEELLRQRC-----
Rv3131|M.tuberculosis_H37Rv         PPTPRRELSQVVEWPEELLRQRC-----
MUL_2421|M.ulcerans_Agy99           PATPRRNLSRVVEWPEQLLDERG-----
MMAR_3502|M.marinum_M               PSTPRRPLAEIVEWMSDREQCGTE----
MAV_2502|M.avium_104                PATPRRELCDFVEWMTDREPGIAE----
TH_0558|M.thermoresistible__bu      VFTRRG-----VEQLGSSLGS-------
MAB_3903|M.abscessus_ATCC_1997      PPTPRRSLADVFEIRS------------
MLBr_01751|M.leprae_Br4923          VLVLRLTVAGPASVRSRRSFERIRLLSG
                                      . *