For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VLKNAVLLACRAPSVHNSQPWRWVAESGSEHTTVHLFVNRHRTVPATDHSGRQAIISCGAVLDHLRIAMT AAHWQANITRFPQPNQPDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRLPFDSPMYWHLFEPALRDAVD KDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEWWTSPFVLAHGVPPDTLASDAERLRVDLGRD FPVRSYQNRRAELADDRSKVLVLSTPSDTRADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIV RGLTRQRGEPQALIRVGIAPPLAAVPAPTPRRPLDSVLQIRQTPEKGRNASDRNARETGWFSPP
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv3127 | - | - | 100% (344) | hypothetical protein Rv3127 |
| M. tuberculosis H37Rv | Rv2032 | acg | 2e-99 | 56.70% (321) | hypothetical protein Rv2032 |
| M. tuberculosis H37Rv | Rv3131 | - | 7e-36 | 34.76% (328) | hypothetical protein Rv3131 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3150 | - | 0.0 | 99.71% (344) | hypothetical protein Mb3150 |
| M. gilvum PYR-GCK | Mflv_3845 | - | 2e-83 | 49.38% (320) | hypothetical protein Mflv_3845 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3903 | - | 1e-92 | 51.71% (321) | hypothetical protein MAB_3903 |
| M. marinum M | MMAR_1522 | - | 1e-134 | 70.09% (331) | hypothetical protein MMAR_1522 |
| M. avium 104 | MAV_2505 | - | 2e-90 | 51.99% (327) | hypothetical protein MAV_2505 |
| M. smegmatis MC2 155 | MSMEG_3952 | - | 4e-92 | 51.88% (320) | hypothetical protein MSMEG_3952 |
| M. thermoresistible (build 8) | TH_1331 | - | 1e-102 | 56.70% (321) | conserved hypothetical protein |
| M. ulcerans Agy99 | MUL_2417 | - | 1e-133 | 69.49% (331) | hypothetical protein MUL_2417 |
| M. vanbaalenii PYR-1 | Mvan_1383 | - | 1e-87 | 50.47% (321) | hypothetical protein Mvan_1383 |
CLUSTAL 2.0.9 multiple sequence alignment
Rv3127|M.tuberculosis_H37Rv ----------MLKNAVLLACRAPSVHNSQPWRWVAE----SGSEHTTVHL
Mb3150|M.bovis_AF2122/97 ----------MLKNAVLLACRAPSVHNSQPWRWVAE----SGSEHTTVHL
MMAR_1522|M.marinum_M --------MEVLKTAVLLACRAPSVHNSQPWRWVADRDRDSGSEVVAVHL
MUL_2417|M.ulcerans_Agy99 ------MDMEVLKTAVLLACRAPSVHNSQPWRWVADRDRDSGSEVVAVHL
MSMEG_3952|M.smegmatis_MC2_155 ----------MITEAVGLACRAPSLHNSQPWRWV--------DHGTSVDL
TH_1331|M.thermoresistible__bu -----MPSVTILERALELACRAPSLHNSQPWRWIVD----RTDDDTEVQL
MAV_2505|M.avium_104 MMMQMTADTEVITAAIELACHAPSLHNSQPWRWVAG--------STGVDL
Mflv_3845|M.gilvum_PYR-GCK -MSATQVRIETIIDAVDVACRAPSLHNSQPWRWVA--------TDHGVDL
Mvan_1383|M.vanbaalenii_PYR-1 -MRDVAVDIEVITEALALACRAPSLFNSQPWRWVS--------EGAVVSL
MAB_3903|M.abscessus_ATCC_1997 -MPKTMVHIDVIQTAIQLACRAPSLHNTQPWRWIVD----LGASAGDLHL
: *: :**:***:.*:*****: : *
Rv3127|M.tuberculosis_H37Rv FVNRHRTVPATDHSGRQAIISCGAVLDHLRIAMTAAHWQANITRFPQPNQ
Mb3150|M.bovis_AF2122/97 FVNRHRTVPATDHSGRQAIISCGAVLDHLRIAMTAAHWQANITRFPQPNQ
MMAR_1522|M.marinum_M FADRGRTVPATDHSGRETLISCGAVLDHLGVAMTAAGWQPSITRFPTPDD
MUL_2417|M.ulcerans_Agy99 FADRGRTVPATDHSGRETLISCGAVLDHLGVAMTAAGWQPSITRFPTPDD
MSMEG_3952|M.smegmatis_MC2_155 FLDHHRIVRSSDSSGREAHISCGAALDHLRVAMAAAGWVIHVDRFPNPNN
TH_1331|M.thermoresistible__bu FADHRRIGRATDRSGRELVISCGAALDHLRVAMAAAGWQAGVERFPNPNN
MAV_2505|M.avium_104 FVDPRRTVKSADKSGREAIISCGAALDHFRVAMAAAGWSSNVAQFPNPNN
Mflv_3845|M.gilvum_PYR-GCK YADPDRMIRAADSTGREALISCGAVLDHFRVAMAAAGWSITVERLPEPSD
Mvan_1383|M.vanbaalenii_PYR-1 FLDDARAPRYTDTTGRELVISCGIVLDHFRVAMAAAGWKCNVDRFPNPNN
MAB_3903|M.abscessus_ATCC_1997 YLDRTRCVTRTDGAGREAIISCGAALDHFRVAMASAGWMTRIERIPDPDN
: : * :* :**: **** .***: :**::* * : ::* *.:
Rv3127|M.tuberculosis_H37Rv PDQLATVEFSPIDHVTAGQRNRAQAILQRRTDRLPFDSPMYWHLFEPALR
Mb3150|M.bovis_AF2122/97 PDQLATVECSPIDHVTAGQRNRAQAILQRRTDRLPFDSPMYWHLFEPALR
MMAR_1522|M.marinum_M PNHLATVDFSPIEEVTETELKRAESILQRRTDRLAFDRPRYWDLFEGVLR
MUL_2417|M.ulcerans_Agy99 PNHLATVDFRPIEEVTETELKRAESILQRRTDRLAFDRRRYWDLFEGVLR
MSMEG_3952|M.smegmatis_MC2_155 REHLANIQFSPVAHVTDAMRDRASAITRRRTDRLPLHPPAHWDTVAPLVN
TH_1331|M.thermoresistible__bu PDHLATVRFTALPAVTPAHRERAEAISARRTDRLPFDPPTDWSTVETVLR
MAV_2505|M.avium_104 LDHLASIDVVPTEYVARARRDLADAILRRRTNRLPFRAPKHWSALEPVLR
Mflv_3845|M.gilvum_PYR-GCK PRHIASIRFAAATEVTAEQKRRADAILVRRTDRLPLSAPRDWDVPGETGA
Mvan_1383|M.vanbaalenii_PYR-1 RDHLASIDFSAMDFVTDAHRQRAEAIARRRTDRLPFAAPPDWESFIAQLS
MAB_3903|M.abscessus_ATCC_1997 PDHLAAITFSPRTVVVVGDRRRADAILQRRTDRLPFETPPNWSQFARMLN
::* : . *. *.:* ***:**.: *
Rv3127|M.tuberculosis_H37Rv D-AVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEWWTSPF
Mb3150|M.bovis_AF2122/97 D-AVDKDVAMLDVVSDDQRTRLVVASQLSEVLRRDDPYYHAELEWWTSPF
MMAR_1522|M.marinum_M N-TIDNDIAMLDVLTDEQRPQLVQASHLSAALRRDDLSYHAELDWWTSPF
MUL_2417|M.ulcerans_Agy99 N-TIDNDIAMLDVLTDEQRPQLVQASHLSAALRRDDLSYHAELDWWTSPF
MSMEG_3952|M.smegmatis_MC2_155 A-AIDHEAVRFVMLADDARGRLAEASQLTESLRRYDEFYHRELQWWTANV
TH_1331|M.thermoresistible__bu Q-NVFDDTVMLTVLGDDARPRLAEASRLSESLRRYDASYHAELQWWTTPT
MAV_2505|M.avium_104 D-VGRDHSVALDVLGPDARPGLVEAARLTEALRRYDDDYHHELDWWTSPS
Mflv_3845|M.gilvum_PYR-GCK AGAEPDNPVRVHTVPGHKRDMLVEASQLAEVLRLYDSDYHSELFWWTADF
Mvan_1383|M.vanbaalenii_PYR-1 SGTAQG-SVSLHTIADGSRPELVKASELTRSARRYDSKYHAELIGWTADV
MAB_3903|M.abscessus_ATCC_1997 T-VIADRAVLLDVIDDVMRPKLADASALSDALRIYDSAYQTELDWWTAPF
. . : * *. *: *: * * *: ** **:
Rv3127|M.tuberculosis_H37Rv VLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLST
Mb3150|M.bovis_AF2122/97 VLAHGVPPDTLASDAERLRVDLGRDFPVRSYQNRRAELADDRSKVLVLST
MMAR_1522|M.marinum_M VLTDGVPPLALASDTERQRVDLSRDFPVRSHQDRRPEITSDWSKILVLST
MUL_2417|M.ulcerans_Agy99 VLTDGVPPLALASDTERQRVDLSRDFPVRSHQDRRPEITSDWSKILVLST
MSMEG_3952|M.smegmatis_MC2_155 RHSDGVPAEALVSSPEAERVGVNRAFPSREHAERRPDVARDEARIAVLIT
TH_1331|M.thermoresistible__bu WVSQGLPPDALPSERERERVEIARAFPARGDSDRRPEVAEDRSTIVVLAT
MAV_2505|M.avium_104 RKFDGIPESALVSEADDRRVDVNRRFPVDPLDERSSAGSYDDAKILVLST
Mflv_3845|M.gilvum_PYR-GCK VATEGIPRSALVSAAEGDRVGIGRTFPVTTQPERRGELESDDAAIVVLST
Mvan_1383|M.vanbaalenii_PYR-1 AVAEGIPTGTLLSEAESDRVDIGRDFPAAGHRDRRGEIAQDHAKVVVLST
MAB_3903|M.abscessus_ATCC_1997 TLEDGVPRSALVSAADSDRVDIGRTFPVVAERASRPGLQEDQAKVLALST
.*:* :* * : ** : * ** * : : .* *
Rv3127|M.tuberculosis_H37Rv PSDTRADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTR
Mb3150|M.bovis_AF2122/97 PSDTRADALRCGEVLSTILLECTMAGMATCTLTHLIESSDSRDIVRGLTR
MMAR_1522|M.marinum_M PGDTRADVLRCGEVLSSVLLECTMAGMATCTLTHLIESNESRDIVADLIG
MUL_2417|M.ulcerans_Agy99 PGDTRADVLRCGEVLSSVLLECTMAGMATCTLTHLIESNESRDIVADLIG
MSMEG_3952|M.smegmatis_MC2_155 PEDTPRDAIACGEALSTILLECTMAGLATCPLTHITEMPESRRIILDLAG
TH_1331|M.thermoresistible__bu PEDSVRDALRCGEALSALLLECTMAGMATCPLTHMIEMQPSRDIVRELLD
MAV_2505|M.avium_104 PEDTRADALRVGQVLSRILLECTAAGLATCPVTHVTELEAGRDLIRHLMA
Mflv_3845|M.gilvum_PYR-GCK EDDSRESVLRCGEALSAFLLDATMTGLATCTVTHITEVPAGRDVVASVLA
Mvan_1383|M.vanbaalenii_PYR-1 VDETRDGFVRCGEMLSSLLLDATMAGLATCVLSHLTEVPESRRIVESLTG
MAB_3903|M.abscessus_ATCC_1997 ARDTPKNLLRCGELLSEVLLEATLAGMATCTITHMLELTASREVVGAAIG
:: . : *: ** .**:.* :*:*** ::*: * .* ::
Rv3127|M.tuberculosis_H37Rv Q-RGEPQALIRVGIAPPLAAVPAPTPRRPLDSVLQIRQTPEKGRNASDRN
Mb3150|M.bovis_AF2122/97 Q-RGEPQALIRVGIAPPLAAVPAPTPRRPLDSVLQIRQTPEKGRNASDRN
MMAR_1522|M.marinum_M R-RGQPQVLIRAGITPLIEEIPAPTPRRGLDSIFEVRQKPEKG-------
MUL_2417|M.ulcerans_Agy99 R-RGQPQVLIRAGITPLIEEIPAPTPRRGLDSIFEVRQKPEKG-------
MSMEG_3952|M.smegmatis_MC2_155 T-TGIPQVLIRIGSAPPVDDVPPVTPRRSLAEVLEVDR------------
TH_1331|M.thermoresistible__bu R-PGLPQVLVRVGTTT-GGDAPPPTPRRPLAEVVEFRG------------
MAV_2505|M.avium_104 DPAAVPQVLIRVGVEPEGESPPRPTPRRPLGDVLQFRPLSDR--------
Mflv_3845|M.gilvum_PYR-GCK T-TSIPQVLVRVGAAPALDAIPAPTPRRPVHDVLEIRRGATC--------
Mvan_1383|M.vanbaalenii_PYR-1 S-QAVPQVVVRVGSAPSGDAIGSPTPRRPVADVLEIRG------------
MAB_3903|M.abscessus_ATCC_1997 --RSHPQALIRVGLAPTFGRIPPPTPRRSLADVFEIRS------------
. **.::* * . **** : .:.:.
Rv3127|M.tuberculosis_H37Rv ARETGWFSPP
Mb3150|M.bovis_AF2122/97 ARETGWFSPP
MMAR_1522|M.marinum_M ----------
MUL_2417|M.ulcerans_Agy99 ----------
MSMEG_3952|M.smegmatis_MC2_155 ----------
TH_1331|M.thermoresistible__bu ----------
MAV_2505|M.avium_104 ----------
Mflv_3845|M.gilvum_PYR-GCK ----------
Mvan_1383|M.vanbaalenii_PYR-1 ----------
MAB_3903|M.abscessus_ATCC_1997 ----------