For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
IILFRGHMRDNSTEHKTRRAASSKDVRPAELDEVDRRILSLLHGDARMPNNALADTVGIAPSTCHGRVRR LVDLGVIRGFYTDIDPVAVGLPLQAMISVNLQSSARGKIRSFIQQIRRKRQVMDVYFLAGADDFILHVAA RDTEDLRSFVVENLNADADVAGTQTSLIFEHLRGAAPI*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv2779c | - | - | 100% (179) | POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY LRP/ASNC-FAMILY) |
| M. tuberculosis H37Rv | Rv2324 | - | 6e-10 | 28.38% (148) | AsnC family transcriptional regulator |
| M. tuberculosis H37Rv | Rv3291c | - | 7e-10 | 30.28% (142) | AsnC family transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2801c | - | 6e-91 | 94.97% (179) | LRP/AsnC family transcriptional regulator |
| M. gilvum PYR-GCK | Mflv_4016 | - | 2e-69 | 75.44% (171) | AsnC family transcriptional regulator |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3099c | - | 1e-63 | 71.86% (167) | AsnC family transcriptional regulator |
| M. marinum M | MMAR_1929 | - | 2e-69 | 88.28% (145) | Lrp/AsnC family transcriptional regulator |
| M. avium 104 | MAV_2084 | - | 3e-11 | 31.47% (143) | AsnC-family protein transcriptional regulator |
| M. smegmatis MC2 155 | MSMEG_2660 | - | 8e-69 | 80.89% (157) | transcriptional regulator, AsnC family protein |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_2155 | - | 2e-68 | 88.28% (145) | Lrp/AsnC family transcriptional regulator |
| M. vanbaalenii PYR-1 | Mvan_2356 | - | 2e-68 | 81.53% (157) | AsnC family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment
Rv2779c|M.tuberculosis_H37Rv MIILFRGHMRDNSTEHKTRRAASSKDVRPAELDEVDRRILSLLHGDARMP
Mb2801c|M.bovis_AF2122/97 MIILFRGHIRDNSTEHKTRRAASSKDVRPAELDEVDRRILSLLHGDARMP
MMAR_1929|M.marinum_M ----------------------------------MDRKILLLLHGDARIT
MUL_2155|M.ulcerans_Agy99 ----------------------------------MDRKILLL-HGDARIT
Mflv_4016|M.gilvum_PYR-GCK --------MSKESTTSRSSAGLAPKDVREVTLDDVDRRILTALHSDARMA
Mvan_2356|M.vanbaalenii_PYR-1 ---------------------MSSKDVR-AAVDDIDRRILTALHSDARIS
MSMEG_2660|M.smegmatis_MC2_155 --------MSEGSSITGVQTPGSPKDVRARDLDDIDRRILLALHDDARIP
MAB_3099c|M.abscessus_ATCC_199 --------MVAKSPESRFDMPPAPNDVRRVELDDVDRRILLELHNDARIP
MAV_2084|M.avium_104 ----------------------------MDRLDDTDERILAELTEQARVT
*.:** :**:.
Rv2779c|M.tuberculosis_H37Rv NNALADTVGIAPSTCHGRVRRLVDLGVIRGFYTDIDPVAVGLPLQAMISV
Mb2801c|M.bovis_AF2122/97 NNALADTVGIAPSTCHGRVRRLVDLGVIRGFYTDIDPVAVGLPLQAMISV
MMAR_1929|M.marinum_M NNALAQAVGIAPSTCHGRVRRLVDLGVIRGFYTDIDPVAVGQPLQAMISV
MUL_2155|M.ulcerans_Agy99 NNALAQAVGIAPSTCHGRVRRLVDLGVIRGFYTDIDPVAVGQPLQAMISV
Mflv_4016|M.gilvum_PYR-GCK NSALAELVGIAPSTCHGRVRRLQELGVIRGFYADIDPAAIGLTLQAMISV
Mvan_2356|M.vanbaalenii_PYR-1 NSALAELVGIAPSTCHGRVRRLQELGVIRGFYADIDPAAIGLTLQAMISV
MSMEG_2660|M.smegmatis_MC2_155 NSALAEMVGIAPSTCHGRVRRLQEIGVIRGFYTDIDPAAVGLGLQAMISV
MAB_3099c|M.abscessus_ATCC_199 NSVLAEAVGIAASTCHGRVRRLQETGVIRGFFTDVDPAAIGRPLQAMISV
MAV_2084|M.avium_104 FAEIGDKVNLSAPAVKRRVDRMLDSGVIKGFTTVVDRNALGWNTEAYVQV
:.: *.::..: : ** *: : ***:** : :* *:* :* :.*
Rv2779c|M.tuberculosis_H37Rv NLQSSARGKIRSFIQQIRRKRQVMDVYFLAGADDFILHVAARDTEDLRSF
Mb2801c|M.bovis_AF2122/97 NLQSSARGKIRSFIQQIRRKRQ--------GADDFILHVAARDTEDLRSF
MMAR_1929|M.marinum_M SLQANARGKIRSFIQQIRRKRQVMDVYFLAGAEDFLLHVAARDTDDLRSF
MUL_2155|M.ulcerans_Agy99 SLQANARGKIRSFIQQIRRKRQVMDVYFLAGAEDFLLHVAARDTDDLRSF
Mflv_4016|M.gilvum_PYR-GCK SLQANSRSQIRHFIQTIRRKPQVMDVYFLAGADDFILHVAARDTEDLRAF
Mvan_2356|M.vanbaalenii_PYR-1 SLQFTARGKIRNFIQQIRSKPQVMDVYFLAGADDFILHVAARDTDDLRAF
MSMEG_2660|M.smegmatis_MC2_155 SLQSNARGKIRSFIAHIRTRPQVMDVYFLAGGDDFILHVAARDTEDLRKF
MAB_3099c|M.abscessus_ATCC_199 SLQANARGKIRTFIRDIRELPQVIDVYFLAGADDYILHVAARDTEDLRSF
MAV_2084|M.avium_104 FCHG--RIAPDELRTAWVDIPEVFSAATVTGTPDAILHVLARDMRHL-EV
: * : : * * :*** *** .* .
Rv2779c|M.tuberculosis_H37Rv VVENLNADADVAGTQTSLIFEHLRGAAPI
Mb2801c|M.bovis_AF2122/97 VVENLNADADVAGTQTSLIFEHLRGAAPI
MMAR_1929|M.marinum_M VVENLNADINVAGTQTSLIFEHLRGAAPL
MUL_2155|M.ulcerans_Agy99 VVENLNADINVAGTQTSLIFEHLRGAAPL
Mflv_4016|M.gilvum_PYR-GCK VVENLNADADVAGTQTSLIFEHLRGASPL
Mvan_2356|M.vanbaalenii_PYR-1 VVENLNADADVAGTQTSLIFEHLRGASPL
MSMEG_2660|M.smegmatis_MC2_155 VVENLNADSDVAGTQTSLIFEHLRGASPL
MAB_3099c|M.abscessus_ATCC_199 VVEKLNALPDVAGTQTSLIFEHLRGGAPL
MAV_2084|M.avium_104 ALERIRSSADVERSESIVVLSNLIDRMRP
.:*.:.: :* ::: :::.:* .