For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSEGSSITGVQTPGSPKDVRARDLDDIDRRILLALHDDARIPNSALAEMVGIAPSTCHGRVRRLQEIGVI RGFYTDIDPAAVGLGLQAMISVSLQSNARGKIRSFIAHIRTRPQVMDVYFLAGGDDFILHVAARDTEDLR KFVVENLNADSDVAGTQTSLIFEHLRGASPL
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_2660 | - | - | 100% (171) | transcriptional regulator, AsnC family protein |
M. smegmatis MC2 155 | MSMEG_2472 | - | 5e-20 | 39.44% (142) | AsnC-family protein transcriptional regulator |
M. smegmatis MC2 155 | MSMEG_1415 | - | 4e-11 | 29.37% (143) | AsnC-family protein transcriptional regulator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2801c | - | 3e-62 | 70.18% (171) | LRP/AsnC family transcriptional regulator |
M. gilvum PYR-GCK | Mflv_4016 | - | 5e-71 | 83.44% (157) | AsnC family transcriptional regulator |
M. tuberculosis H37Rv | Rv2779c | - | 5e-69 | 80.89% (157) | LRP/AsnC family transcriptional regulator |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3099c | - | 8e-68 | 79.25% (159) | AsnC family transcriptional regulator |
M. marinum M | MMAR_1929 | - | 2e-62 | 80.69% (145) | Lrp/AsnC family transcriptional regulator |
M. avium 104 | MAV_2084 | - | 1e-12 | 30.77% (143) | AsnC-family protein transcriptional regulator |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_2155 | - | 2e-61 | 80.69% (145) | Lrp/AsnC family transcriptional regulator |
M. vanbaalenii PYR-1 | Mvan_2356 | - | 7e-71 | 85.35% (157) | AsnC family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4016|M.gilvum_PYR-GCK --------MSKESTTSRSSAGLAPKDVREVTLDDVDRRILTALHSDARMA Mvan_2356|M.vanbaalenii_PYR-1 ---------------------MSSKDVR-AAVDDIDRRILTALHSDARIS MSMEG_2660|M.smegmatis_MC2_155 --------MSEGSSITGVQTPGSPKDVRARDLDDIDRRILLALHDDARIP Mb2801c|M.bovis_AF2122/97 MIILFRGHIRDNSTEHKTRRAASSKDVRPAELDEVDRRILSLLHGDARMP Rv2779c|M.tuberculosis_H37Rv MIILFRGHMRDNSTEHKTRRAASSKDVRPAELDEVDRRILSLLHGDARMP MMAR_1929|M.marinum_M ----------------------------------MDRKILLLLHGDARIT MUL_2155|M.ulcerans_Agy99 ----------------------------------MDRKILLL-HGDARIT MAB_3099c|M.abscessus_ATCC_199 --------MVAKSPESRFDMPPAPNDVRRVELDDVDRRILLELHNDARIP MAV_2084|M.avium_104 ----------------------------MDRLDDTDERILAELTEQARVT *.:** :**:. Mflv_4016|M.gilvum_PYR-GCK NSALAELVGIAPSTCHGRVRRLQELGVIRGFYADIDPAAIGLTLQAMISV Mvan_2356|M.vanbaalenii_PYR-1 NSALAELVGIAPSTCHGRVRRLQELGVIRGFYADIDPAAIGLTLQAMISV MSMEG_2660|M.smegmatis_MC2_155 NSALAEMVGIAPSTCHGRVRRLQEIGVIRGFYTDIDPAAVGLGLQAMISV Mb2801c|M.bovis_AF2122/97 NNALADTVGIAPSTCHGRVRRLVDLGVIRGFYTDIDPVAVGLPLQAMISV Rv2779c|M.tuberculosis_H37Rv NNALADTVGIAPSTCHGRVRRLVDLGVIRGFYTDIDPVAVGLPLQAMISV MMAR_1929|M.marinum_M NNALAQAVGIAPSTCHGRVRRLVDLGVIRGFYTDIDPVAVGQPLQAMISV MUL_2155|M.ulcerans_Agy99 NNALAQAVGIAPSTCHGRVRRLVDLGVIRGFYTDIDPVAVGQPLQAMISV MAB_3099c|M.abscessus_ATCC_199 NSVLAEAVGIAASTCHGRVRRLQETGVIRGFFTDVDPAAIGRPLQAMISV MAV_2084|M.avium_104 FAEIGDKVNLSAPAVKRRVDRMLDSGVIKGFTTVVDRNALGWNTEAYVQV :.: *.::..: : ** *: : ***:** : :* *:* :* :.* Mflv_4016|M.gilvum_PYR-GCK SLQANSRSQIRHFIQTIRRKPQVMDVYFLAGADDFILHVAARDTEDLRAF Mvan_2356|M.vanbaalenii_PYR-1 SLQFTARGKIRNFIQQIRSKPQVMDVYFLAGADDFILHVAARDTDDLRAF MSMEG_2660|M.smegmatis_MC2_155 SLQSNARGKIRSFIAHIRTRPQVMDVYFLAGGDDFILHVAARDTEDLRKF Mb2801c|M.bovis_AF2122/97 NLQSSARGKIRSFIQQIRRKRQ--------GADDFILHVAARDTEDLRSF Rv2779c|M.tuberculosis_H37Rv NLQSSARGKIRSFIQQIRRKRQVMDVYFLAGADDFILHVAARDTEDLRSF MMAR_1929|M.marinum_M SLQANARGKIRSFIQQIRRKRQVMDVYFLAGAEDFLLHVAARDTDDLRSF MUL_2155|M.ulcerans_Agy99 SLQANARGKIRSFIQQIRRKRQVMDVYFLAGAEDFLLHVAARDTDDLRSF MAB_3099c|M.abscessus_ATCC_199 SLQANARGKIRTFIRDIRELPQVIDVYFLAGADDYILHVAARDTEDLRSF MAV_2084|M.avium_104 FCHG--RIAPDELRTAWVDIPEVFSAATVTGTPDAILHVLARDMRHL-EV : * : : * * :*** *** .* . Mflv_4016|M.gilvum_PYR-GCK VVENLNADADVAGTQTSLIFEHLRGASPL Mvan_2356|M.vanbaalenii_PYR-1 VVENLNADADVAGTQTSLIFEHLRGASPL MSMEG_2660|M.smegmatis_MC2_155 VVENLNADSDVAGTQTSLIFEHLRGASPL Mb2801c|M.bovis_AF2122/97 VVENLNADADVAGTQTSLIFEHLRGAAPI Rv2779c|M.tuberculosis_H37Rv VVENLNADADVAGTQTSLIFEHLRGAAPI MMAR_1929|M.marinum_M VVENLNADINVAGTQTSLIFEHLRGAAPL MUL_2155|M.ulcerans_Agy99 VVENLNADINVAGTQTSLIFEHLRGAAPL MAB_3099c|M.abscessus_ATCC_199 VVEKLNALPDVAGTQTSLIFEHLRGGAPL MAV_2084|M.avium_104 ALERIRSSADVERSESIVVLSNLIDRMRP .:*.:.: :* ::: :::.:* .