For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MDRKILLLHGDARITNNALAQAVGIAPSTCHGRVRRLVDLGVIRGFYTDIDPVAVGQPLQAMISVSLQAN ARGKIRSFIQQIRRKRQVMDVYFLAGAEDFLLHVAARDTDDLRSFVVENLNADINVAGTQTSLIFEHLRG AAPL
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. ulcerans Agy99 | MUL_2155 | - | - | 100% (144) | Lrp/AsnC family transcriptional regulator |
M. ulcerans Agy99 | MUL_3913 | - | 1e-13 | 33.81% (139) | Lrp/AsnC family transcriptional regulator |
M. ulcerans Agy99 | MUL_4026 | - | 2e-09 | 30.47% (128) | hypothetical protein MUL_4026 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2801c | - | 7e-62 | 82.76% (145) | LRP/AsnC family transcriptional regulator |
M. gilvum PYR-GCK | Mflv_4016 | - | 6e-61 | 79.31% (145) | AsnC family transcriptional regulator |
M. tuberculosis H37Rv | Rv2779c | - | 1e-68 | 88.28% (145) | LRP/AsnC family transcriptional regulator |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3099c | - | 5e-59 | 77.24% (145) | AsnC family transcriptional regulator |
M. marinum M | MMAR_1929 | - | 6e-76 | 99.31% (145) | Lrp/AsnC family transcriptional regulator |
M. avium 104 | MAV_2084 | - | 3e-07 | 28.06% (139) | AsnC-family protein transcriptional regulator |
M. smegmatis MC2 155 | MSMEG_2660 | - | 2e-61 | 80.69% (145) | transcriptional regulator, AsnC family protein |
M. thermoresistible (build 8) | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_2356 | - | 4e-62 | 81.38% (145) | AsnC family transcriptional regulator |
CLUSTAL 2.0.9 multiple sequence alignment MUL_2155|M.ulcerans_Agy99 ----------------------------------MDRKILLL-HGDARIT MMAR_1929|M.marinum_M ----------------------------------MDRKILLLLHGDARIT Mb2801c|M.bovis_AF2122/97 MIILFRGHIRDNSTEHKTRRAASSKDVRPAELDEVDRRILSLLHGDARMP Rv2779c|M.tuberculosis_H37Rv MIILFRGHMRDNSTEHKTRRAASSKDVRPAELDEVDRRILSLLHGDARMP Mflv_4016|M.gilvum_PYR-GCK --------MSKESTTSRSSAGLAPKDVREVTLDDVDRRILTALHSDARMA Mvan_2356|M.vanbaalenii_PYR-1 ---------------------MSSKDVR-AAVDDIDRRILTALHSDARIS MSMEG_2660|M.smegmatis_MC2_155 --------MSEGSSITGVQTPGSPKDVRARDLDDIDRRILLALHDDARIP MAB_3099c|M.abscessus_ATCC_199 --------MVAKSPESRFDMPPAPNDVRRVELDDVDRRILLELHNDARIP MAV_2084|M.avium_104 ----------------------------MDRLDDTDERILAELTEQARVT *.:** :**:. MUL_2155|M.ulcerans_Agy99 NNALAQAVGIAPSTCHGRVRRLVDLGVIRGFYTDIDPVAVGQPLQAMISV MMAR_1929|M.marinum_M NNALAQAVGIAPSTCHGRVRRLVDLGVIRGFYTDIDPVAVGQPLQAMISV Mb2801c|M.bovis_AF2122/97 NNALADTVGIAPSTCHGRVRRLVDLGVIRGFYTDIDPVAVGLPLQAMISV Rv2779c|M.tuberculosis_H37Rv NNALADTVGIAPSTCHGRVRRLVDLGVIRGFYTDIDPVAVGLPLQAMISV Mflv_4016|M.gilvum_PYR-GCK NSALAELVGIAPSTCHGRVRRLQELGVIRGFYADIDPAAIGLTLQAMISV Mvan_2356|M.vanbaalenii_PYR-1 NSALAELVGIAPSTCHGRVRRLQELGVIRGFYADIDPAAIGLTLQAMISV MSMEG_2660|M.smegmatis_MC2_155 NSALAEMVGIAPSTCHGRVRRLQEIGVIRGFYTDIDPAAVGLGLQAMISV MAB_3099c|M.abscessus_ATCC_199 NSVLAEAVGIAASTCHGRVRRLQETGVIRGFFTDVDPAAIGRPLQAMISV MAV_2084|M.avium_104 FAEIGDKVNLSAPAVKRRVDRMLDSGVIKGFTTVVDRNALGWNTEAYVQV :.: *.::..: : ** *: : ***:** : :* *:* :* :.* MUL_2155|M.ulcerans_Agy99 SLQANARGKIRSFIQQIRRKRQVMDVYFLAGAEDFLLHVAARDTDDLRSF MMAR_1929|M.marinum_M SLQANARGKIRSFIQQIRRKRQVMDVYFLAGAEDFLLHVAARDTDDLRSF Mb2801c|M.bovis_AF2122/97 NLQSSARGKIRSFIQQIRRKRQ--------GADDFILHVAARDTEDLRSF Rv2779c|M.tuberculosis_H37Rv NLQSSARGKIRSFIQQIRRKRQVMDVYFLAGADDFILHVAARDTEDLRSF Mflv_4016|M.gilvum_PYR-GCK SLQANSRSQIRHFIQTIRRKPQVMDVYFLAGADDFILHVAARDTEDLRAF Mvan_2356|M.vanbaalenii_PYR-1 SLQFTARGKIRNFIQQIRSKPQVMDVYFLAGADDFILHVAARDTDDLRAF MSMEG_2660|M.smegmatis_MC2_155 SLQSNARGKIRSFIAHIRTRPQVMDVYFLAGGDDFILHVAARDTEDLRKF MAB_3099c|M.abscessus_ATCC_199 SLQANARGKIRTFIRDIRELPQVIDVYFLAGADDYILHVAARDTEDLRSF MAV_2084|M.avium_104 FCHG--RIAPDELRTAWVDIPEVFSAATVTGTPDAILHVLARDMRHL-EV : * : : * * :*** *** .* . MUL_2155|M.ulcerans_Agy99 VVENLNADINVAGTQTSLIFEHLRGAAPL MMAR_1929|M.marinum_M VVENLNADINVAGTQTSLIFEHLRGAAPL Mb2801c|M.bovis_AF2122/97 VVENLNADADVAGTQTSLIFEHLRGAAPI Rv2779c|M.tuberculosis_H37Rv VVENLNADADVAGTQTSLIFEHLRGAAPI Mflv_4016|M.gilvum_PYR-GCK VVENLNADADVAGTQTSLIFEHLRGASPL Mvan_2356|M.vanbaalenii_PYR-1 VVENLNADADVAGTQTSLIFEHLRGASPL MSMEG_2660|M.smegmatis_MC2_155 VVENLNADSDVAGTQTSLIFEHLRGASPL MAB_3099c|M.abscessus_ATCC_199 VVEKLNALPDVAGTQTSLIFEHLRGGAPL MAV_2084|M.avium_104 ALERIRSSADVERSESIVVLSNLIDRMRP .:*.:.: :* ::: :::.:* .