For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MLEITLLGTGSPIPDPDRAGPSTLVRAGAQAFLVDCGRGVLQRAAAVGVGAAGLSAVLLTHLHGDVLITS WVTNFAADPAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHADLTTPPPIEVHEYTAGPAWDRDGVTIR VAPTDHRPVTPTIGFRIESDGASVVLAGDTVPCDSLDQLAAGADALVHTVIRKDIVTQIPQQRVKDICDY HSSVQEAAATANRAGVGTLVMTHYVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPRR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv2407 | - | - | 100% (273) | ribonuclease Z |
M. tuberculosis H37Rv | Rv3796 | - | 1e-19 | 26.21% (309) | hypothetical protein Rv3796 |
M. tuberculosis H37Rv | Rv1339 | - | 2e-09 | 29.55% (247) | hypothetical protein Rv1339 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2430 | - | 1e-156 | 97.50% (280) | ribonuclease Z |
M. gilvum PYR-GCK | Mflv_2669 | - | 1e-119 | 74.46% (278) | ribonuclease Z |
M. leprae Br4923 | MLBr_01173 | - | 5e-09 | 27.02% (248) | hypothetical protein MLBr_01173 |
M. abscessus ATCC 19977 | MAB_1483 | - | 2e-11 | 28.81% (243) | hypothetical protein MAB_1483 |
M. marinum M | MMAR_3727 | - | 1e-137 | 86.02% (279) | metal-dependent hydrolase |
M. avium 104 | MAV_1774 | - | 1e-125 | 78.26% (276) | ribonuclease Z |
M. smegmatis MC2 155 | MSMEG_4568 | - | 1e-123 | 75.90% (278) | ribonuclease Z |
M. thermoresistible (build 8) | TH_1457 | - | 1e-116 | 70.14% (278) | CONSERVED HYPOTHETCAL PROTEIN |
M. ulcerans Agy99 | MUL_3670 | - | 1e-137 | 86.02% (279) | ribonuclease Z |
M. vanbaalenii PYR-1 | Mvan_3908 | - | 1e-121 | 75.54% (278) | ribonuclease Z |
CLUSTAL 2.0.9 multiple sequence alignment Rv2407|M.tuberculosis_H37Rv --------------MLEITLLGTGSPIPDPDRAGPSTLVRAG-AQAFLVD Mb2430|M.bovis_AF2122/97 --------------MLEITLLGTGSPIPDPDRAGPSTLVRAG-AQAFLVD MMAR_3727|M.marinum_M --------------MIEITLLGTGSPIPDPDRAGPSTLVRAG-GQVFLVD MUL_3670|M.ulcerans_Agy99 --------------MIEITLLGTGSPIPDPDRAGPSTLVRAG-GQVFLVD MAV_1774|M.avium_104 --------------MIEVTLLGTGSPIPDPNRAGPSTLVRAG-GQVFLVD Mflv_2669|M.gilvum_PYR-GCK --------------MIEVTLLGTGSPIPDARRAGPSTLVRAG-GQTFLVD Mvan_3908|M.vanbaalenii_PYR-1 MSPVGRPPRVTSGLMIEVTLLGTGSPIPDARRAGPSTLVRAG-GQTFLVD MSMEG_4568|M.smegmatis_MC2_155 --------------MIEVTLLGTGSPIPDPDRAGPSTMVRAG-GQTFLVD TH_1457|M.thermoresistible__bu --------------MIEVTLLGTGSPVPDAHRAGPSTLVRAG-HQTLLID MLBr_01173|M.leprae_Br4923 -------------MTVRITVLGCSGSVVGPDSPASGYLLRAPDTPPLVLD MAB_1483|M.abscessus_ATCC_1997 ---------------MRVTVLGCSGSVTGPDSPASGYLLTAPDAPPLVID :.:*:** ...: .. .... :: * :::* Rv2407|M.tuberculosis_H37Rv CGRGVLQRAAAVGVGAAGLSAVLLTHLH-------GDVLITSWVTNFAAD Mb2430|M.bovis_AF2122/97 CGRGVLQRAAAVGVGAAGLSAVLLTHLHSDHIAELGDVLITSWVTNFAAD MMAR_3727|M.marinum_M CGRGVLQRAAAVGVGAAGLSAVLLTHLHSDHIAELGDVLITSWVTNFAAD MUL_3670|M.ulcerans_Agy99 CGRGVLQRAAAVGVGAAGLSAVLLTHLHSDHIAELGDVLITSWVTNFAAD MAV_1774|M.avium_104 CGRGVLQRAAAVGVGAAGLSTLLLTHLHSDHVGDLGDVLITRWVSTFTPD Mflv_2669|M.gilvum_PYR-GCK CGRGVLQRAAAVGVGANQISALLLTHLHSDHIADLGDVLITRWVSNFAPD Mvan_3908|M.vanbaalenii_PYR-1 CGRGVLQRLAAVGVGANNITALLLTHLHSDHIADLGDVLITRWVSNFAPD MSMEG_4568|M.smegmatis_MC2_155 CGRGVLQRLAAAGSSASQLSALLLTHLHSDHIADLGDVIITRWVSTFTPD TH_1457|M.thermoresistible__bu CGRGVQQRMAGAETSATALTALLLTHLHSDHIADLGDLLITRWISNFDPQ MLBr_01173|M.leprae_Br4923 FGGGVLG--ALQRHADPGSVHVLLSHLHADHCLDMPGLFVWRRYHPTRPV MAB_1483|M.abscessus_ATCC_1997 FGGGVLG--SLQRFADPGSVSVLLSHLHADHCLDLPGLFVWRRYHPNPPK * ** : . :**:*** .::: . Rv2407|M.tuberculosis_H37Rv PAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHADLTTPPPIEVHEYTA Mb2430|M.bovis_AF2122/97 PAPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHADLTTPPPIEVHEYTA MMAR_3727|M.marinum_M PAPLQVIGPPGTAETVDAMLKAFGRDIGYRIAHHADLNAPPPIEVHEYTD MUL_3670|M.ulcerans_Agy99 PAPLQVIGPPGTAETVEAMLKAFGRDIGYRIAHHADLNAPPPIEVHEYTD MAV_1774|M.avium_104 PVPLPIIGPPGTAELVAATLNALRHDIGYRIAHHADLNAPPAVDVREHTD Mflv_2669|M.gilvum_PYR-GCK LPPLPIIGPPGTAEVVENMLKAFSFDIGYRIAHHDDLTTPPPVEVEEVTD Mvan_3908|M.vanbaalenii_PYR-1 LAPLPIIGPPGTAEVVENTLKAFGFDIGYRIAHHADLTTPPPVEVEEVTE MSMEG_4568|M.smegmatis_MC2_155 APPLPIIGPPGTAEVVEATLKAFGHDIGYRIAHHDDLTAPPPVEVHEHTE TH_1457|M.thermoresistible__bu LPPLPIIGPPGTAEVVSATLRAFGHDIGYRMKHHADLTTPPQVDVKEATE MLBr_01173|M.leprae_Br4923 GKAL-LYGPDDTWLRLGAASSPYGGEID---------DCSDIFDVRHWVD MAB_1483|M.abscessus_ATCC_1997 GKAI-MYGPADTLVRVGAASAEIGGEVD---------DFTDIFDVFPWAD .: : ** .* : ::. . .:* . Rv2407|M.tuberculosis_H37Rv GPAWDRDGVTIRVAPTDHRPVTPTIGFRIES-DGASVVLAGDTVPCDSLD Mb2430|M.bovis_AF2122/97 GPAWDRDGVTIRVAPTDHRPVTPTIGFRIES-DGASVVLAGDTVPCDSLD MMAR_3727|M.marinum_M GTVWDRDGVAIRVAPTDHRPVAPTIGFRVEF-DGASAVLAGDTVPCPSLD MUL_3670|M.ulcerans_Agy99 GTVWDRDGVAIRVAPTDHRPVAPTIGFRVEF-DGASAVLAGGTVPCPSLD MAV_1774|M.avium_104 GPVWDRDGVSIRVAPTDHRPVAPTIGFRVDY-QGASVVLAGDTVPCAGLD Mflv_2669|M.gilvum_PYR-GCK GVVWGRDEVSIRVGPTDHRPVTPTIGFRIEH-HGASVVLAGDTVPCRGLD Mvan_3908|M.vanbaalenii_PYR-1 GVVWGRDEVSIRVGPTDHRPVTPTIGFRIEH-NGASVVLAGDTVPCRGLD MSMEG_4568|M.smegmatis_MC2_155 GVVWDRDGVVIRVGPTDHRPVTPTIAFRVEH-ADASVVAAGDSVPCATLD TH_1457|M.thermoresistible__bu GVVWDVDGVRIRVAPTDHRPVTPTIGFRVEH-DGASVVLAGDTVPCESLD MLBr_01173|M.leprae_Br4923 GEPVPLG--ALMIMPRLVAHPTESYGLRITDPSGASLVYSGDTGSCDQLV MAB_1483|M.abscessus_ATCC_1997 GEPVQFG--SLTVTPTRVAHPPESYGLRIEDSSGTVLAYSGDTGICDAVV * . : : * . : .:*: .: . :*.: * : Rv2407|M.tuberculosis_H37Rv QLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVG Mb2430|M.bovis_AF2122/97 QLAAGADALVHTVIRKDIVTQIPQQRVKDICDYHSSVQEAAATANRAGVG MMAR_3727|M.marinum_M ELAAGAGALVHTVIRKDIITNFPQQRVKDICDYHSSVQEAAATAARAGVG MUL_3670|M.ulcerans_Agy99 ELAAGAGALVHTVIRKDIITNFPQQRVKDICDYHSSVQEAAATAARAGVG MAV_1774|M.avium_104 ELAAGAGALVHTVIRKDIVATIPQQRLQDICDYHSSVEQAAATAARAGVG Mflv_2669|M.gilvum_PYR-GCK KLAAGAGALVHTVIRRDLIEALPMQRIRDICDYHSSVEQAAETATRAGVG Mvan_3908|M.vanbaalenii_PYR-1 ELAAGAGALVHTVIRPDLIEAMPVQRIRDICDYHSSVEQAADTATRAGVG MSMEG_4568|M.smegmatis_MC2_155 ALATGAGALIHTVIRKDIIETLPQQRIRDICDYHSSVQEAAATAARAGVG TH_1457|M.thermoresistible__bu ELAAGAGAMVHTVIRKELIAQLPQQRIREICEYHSSPQEAGATAERAGVG MLBr_01173|M.leprae_Br4923 ELARGADVFLCEASWTHSP-DRPPN-------LHLSGTEAGRAAAQASVR MAB_1483|M.abscessus_ATCC_1997 DLARGADVFLCEASWTHMPGHRPPD-------LHLSGTEAGQIATRAGVK ** **..:: . . * : * * :*. * :*.* Rv2407|M.tuberculosis_H37Rv TLVMTHYVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPRR---- Mb2430|M.bovis_AF2122/97 TLVMTHYVPAIGPGQEEQWRALAATEFSGRIEVGNDLHRVEVHPRR---- MMAR_3727|M.marinum_M TLVMTHYVPAIIAGQEDQWRALAATEFGGRIELGNDLHRVEVHAR----- MUL_3670|M.ulcerans_Agy99 TLVMTHYVPAIIAGQEDQWRALAATEFGGRIELGNDLHRVEVHAR----- MAV_1774|M.avium_104 TLVMTHYVPALVAGQEEQWRALAAREFAGRVELGDDLHRVQVDAPS---- Mflv_2669|M.gilvum_PYR-GCK ILILTHYVPTLQPGQEDDWRALAATRFDRQIEIGDDLHRVQVHPGVCAKP Mvan_3908|M.vanbaalenii_PYR-1 ILILTHYVPTLQPGQEEDWRALAASVFDRQIEIGDDLHRVEVHPGVGARP MSMEG_4568|M.smegmatis_MC2_155 ILILTHYVPAIAPGTEDQWRELAATEFDRQIEVGADLHRVEVHPGVCVKP TH_1457|M.thermoresistible__bu ILILTHYLPPVQPGQEDEWRAQAATTFSRQIEVGDDLHRVQVHPGVGSAR MLBr_01173|M.leprae_Br4923 ELLLTHIPPWTS---REDVISEAKAEFDGPVHAVVSGETFDIQAPERV-- MAB_1483|M.abscessus_ATCC_1997 ELLLTHIPPWTS---REDVIAEAKSAFDGPVHAVVAGENIDL-------- *::** * .:: * * :. . .:: Rv2407|M.tuberculosis_H37Rv ----- Mb2430|M.bovis_AF2122/97 ----- MMAR_3727|M.marinum_M ----- MUL_3670|M.ulcerans_Agy99 ----- MAV_1774|M.avium_104 ----- Mflv_2669|M.gilvum_PYR-GCK AG--- Mvan_3908|M.vanbaalenii_PYR-1 AG--- MSMEG_4568|M.smegmatis_MC2_155 AG--- TH_1457|M.thermoresistible__bu FGTSP MLBr_01173|M.leprae_Br4923 ----- MAB_1483|M.abscessus_ATCC_1997 -----