For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. tuberculosis H37Rv Rv2406c (-)

annotation: hypothetical protein Rv2406c
coordinates: 2704009 - 2704437
length: 142

RIADVLRNKGAAVVTINPDATVGELLAGLAEQNIGAMVVVGAEGVVGIVSERDVVRQLHTYGASVLSRPV
AKIMSTTVATCTKSDTVDKISVLMTENRVRHVPVLDGKKLIGIVSIGDVVKSRMGELEAEQQQLQSYITQ
G*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. tuberculosis H37RvRv2406c--100% (142)hypothetical protein Rv2406c
M. tuberculosis H37RvRv3411cguaB29e-0728.21% (117) inosine 5'-monophosphate dehydrogenase
M. tuberculosis H37RvRv2626c-9e-0622.32% (112) hypothetical protein Rv2626c

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2429c-4e-74100.00% (142) hypothetical protein Mb2429c
M. gilvum PYR-GCKMflv_2670-8e-4764.79% (142) signal-transduction protein
M. leprae Br4923MLBr_00387guaB22e-0729.06% (117) inosine 5'-monophosphate dehydrogenase
M. abscessus ATCC 19977MAB_3721c-1e-0831.25% (112) inosine 5'-monophosphate dehydrogenase
M. marinum MMMAR_3726-1e-6790.85% (142) transcriptional regulator
M. avium 104MAV_1776-3e-6790.14% (142) CBS domain-containing protein
M. smegmatis MC2 155MSMEG_4564-6e-5573.94% (142) CBS domain-containing protein
M. thermoresistible (build 8)TH_1455-6e-3756.82% (132) CBS domain protein
M. ulcerans Agy99MUL_3669-6e-6789.44% (142) transcriptional regulator
M. vanbaalenii PYR-1Mvan_3907-6e-4968.31% (142) signal-transduction protein

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_2670|M.gilvum_PYR-GCK          --------------------------------------------------
Mvan_3907|M.vanbaalenii_PYR-1       --------------------------------------------------
TH_1455|M.thermoresistible__bu      --------------------------------------------------
Rv2406c|M.tuberculosis_H37Rv        --------------------------------------------------
Mb2429c|M.bovis_AF2122/97           --------------------------------------------------
MMAR_3726|M.marinum_M               --------------------------------------------------
MUL_3669|M.ulcerans_Agy99           --------------------------------------------------
MAV_1776|M.avium_104                --------------------------------------------------
MSMEG_4564|M.smegmatis_MC2_155      --------------------------------------------------
MLBr_00387|M.leprae_Br4923          MIRGMSNLKESSDFVASSYVRLGGLMDDPAATGGDNPHKVAMLGLTFDDV
MAB_3721c|M.abscessus_ATCC_199      ----MT------------------IAAGSVHTGGDDPHKVAMLGLTFDDV
                                                                                      

Mflv_2670|M.gilvum_PYR-GCK          --------------------------------------------------
Mvan_3907|M.vanbaalenii_PYR-1       --------------------------------------------------
TH_1455|M.thermoresistible__bu      --------------------------------------------------
Rv2406c|M.tuberculosis_H37Rv        --------------------------------------------------
Mb2429c|M.bovis_AF2122/97           --------------------------------------------------
MMAR_3726|M.marinum_M               --------------------------------------------------
MUL_3669|M.ulcerans_Agy99           --------------------------------------------------
MAV_1776|M.avium_104                --------------------------------------------------
MSMEG_4564|M.smegmatis_MC2_155      --------------------------------------------------
MLBr_00387|M.leprae_Br4923          LLLPAASDVVPATADISSQLTKKIRLKVPLVSSAMDTVTEARMAIAMARA
MAB_3721c|M.abscessus_ATCC_199      LLLPAASDVLPAGADTSSQLTKRIRLNVPLVSSAMDTVTEARMAIAMARA
                                                                                      

Mflv_2670|M.gilvum_PYR-GCK          ----------------MRISDVLRSKG---AAVATITPETSVAGLLTELS
Mvan_3907|M.vanbaalenii_PYR-1       ----------------MRISDVLRNKG---ATVATITPETSVAGLLTELS
TH_1455|M.thermoresistible__bu      --------------------------------VATVTETTTITGLLAEMA
Rv2406c|M.tuberculosis_H37Rv        ----------------MRIADVLRNKG---AAVVTINPDATVGELLAGLA
Mb2429c|M.bovis_AF2122/97           ----------------MRIADVLRNKG---AAVVTINPDATVGELLAGLA
MMAR_3726|M.marinum_M               ----------------MRIADVLRNKG---AAVTTINPDATVRELLAGLA
MUL_3669|M.ulcerans_Agy99           ----------------MRIADVLRNKG---AVVTTINPDATVRELFAGLA
MAV_1776|M.avium_104                ----------------MRIADVLRNKG---AAVVTINPDATVRELIAGLT
MSMEG_4564|M.smegmatis_MC2_155      ----------------MRIADVLKNKG---TAVVTISPQATVTELLAGLA
MLBr_00387|M.leprae_Br4923          GGMGVLHRNLPVGEQAGQVETVKRSEAGMVTDPVTCRPDNTLAQVGALCA
MAB_3721c|M.abscessus_ATCC_199      GGMGVLHRNLSVEDQAGQVETVKRSEAGMVTNPVTCSPANTLAEVDALCA
                                                                     .*     ::  : :  :

Mflv_2670|M.gilvum_PYR-GCK          VRNIGAMVVVSPDG---LQGIVSERDIVRKLHDMGADLLRRPVSEIMT-T
Mvan_3907|M.vanbaalenii_PYR-1       VHNIGAMVVVSPDG---LLGIVSERDVVRKLHDMGADLLRRPVSEIMS-T
TH_1455|M.thermoresistible__bu      THNVGAMVVVRPDGSGGIAGMVSERDVVRKLHQRGANLLDQPVSEIMT-S
Rv2406c|M.tuberculosis_H37Rv        EQNIGAMVVVGAEG---VVGIVSERDVVRQLHTYGASVLSRPVAKIMS-T
Mb2429c|M.bovis_AF2122/97           EQNIGAMVVVGAEG---VVGIVSERDVVRQLHTYGASVLSRPVAKIMS-T
MMAR_3726|M.marinum_M               EQNIGAMVVVGVEG---VVGIVSERDVVRQLHTHGASVLTRPVSKIMT-S
MUL_3669|M.ulcerans_Agy99           EQNIGAMVVVGVEG---VVGIVSERDVVRQLHTHGASVLTRPVSKIMT-S
MAV_1776|M.avium_104                EQNIGAMVVVGAEG---VLGIVSERDVVRQLHVHGASVLSRPVSKIMT-T
MSMEG_4564|M.smegmatis_MC2_155      EMNIGAMVVMGKSG---LEGIVSERDVVRQLHKRGSSLLAQPVSSIMT-S
MLBr_00387|M.leprae_Br4923          RFRISGLPVVDDSG--ALAGIITNRDMRFEVD------QSKQVAEVMTKT
MAB_3721c|M.abscessus_ATCC_199      RFRISGLPVVDAQG--ALVGIITNRDMRFEAD------LSKPVAEVMTKA
                                      .:..: *:  .*   : *::::**:  : .        : *:.:*: :

Mflv_2670|M.gilvum_PYR-GCK          LVATCTPDDSVDSLSALMTNNRVRHVPVVVD-GRLAGIVSIGDVVKTRME
Mvan_3907|M.vanbaalenii_PYR-1       LVATCTPDDTVDSLSALMTNNRVRHVPVVVD-GRLAGIVSIGDVVKTRME
TH_1455|M.thermoresistible__bu      LVVTCSPDDAVDDLAAMMTDNRVRHVPVLVD-GRLAGIVSIGDVVKTRLE
Rv2406c|M.tuberculosis_H37Rv        TVATCTKSDTVDKISVLMTENRVRHVPVLDG-KKLIGIVSIGDVVKSRMG
Mb2429c|M.bovis_AF2122/97           TVATCTKSDTVDKISVLMTENRVRHVPVLDG-KKLIGIVSIGDVVKSRMG
MMAR_3726|M.marinum_M               AVATCTKSDTVDSISVLMTQNRVRHVPVLDG-QKLIGIVSIGDVVKSRMG
MUL_3669|M.ulcerans_Agy99           AVATCTKSDTVDSISVLMTQNRVRHVPVLDG-QKLIGIVSIGDVVKSRMG
MAV_1776|M.avium_104                TLATCTKTDTVDEISVLMTRNRVRHVPVLDG-KKLIGIVSIGDVVKTRME
MSMEG_4564|M.smegmatis_MC2_155      VVATCTPRDTVDRLNVLMTQNRVRHIPVLDD-GRLAGIVSIGDVVKTRME
MLBr_00387|M.leprae_Br4923          PLITAAEGVSADAALGLLRRNKIEKLPVVDGHGRLTGLITVKDFVKTEQH
MAB_3721c|M.abscessus_ATCC_199      PLITAREGVTADAALGLLRRNKIEKLPIVDGEGRLTGLITVKDFAKTEQH
                                     : *.    :.*    ::  *::.::*:: .  :* *:::: *..*:.  

Mflv_2670|M.gilvum_PYR-GCK          ELEHEHERLQAYITQG----------------------------------
Mvan_3907|M.vanbaalenii_PYR-1       ELEREQQHLQAYITQG----------------------------------
TH_1455|M.thermoresistible__bu      ELEAEQEQLHAYITGG----------------------------------
Rv2406c|M.tuberculosis_H37Rv        ELEAEQQQLQSYITQG----------------------------------
Mb2429c|M.bovis_AF2122/97           ELEAEQQQLQSYITQG----------------------------------
MMAR_3726|M.marinum_M               ELEAEQEQLQSYITQG----------------------------------
MUL_3669|M.ulcerans_Agy99           ELEAEQEQLQSYITQG----------------------------------
MAV_1776|M.avium_104                ELEAEQQQLQSYITQG----------------------------------
MSMEG_4564|M.smegmatis_MC2_155      ELETEQQQLQAYITQGR---------------------------------
MLBr_00387|M.leprae_Br4923          PLATKDNDGRLLVGAAVGVGGDAWVRAMMLVDAGVDVLIVDTAHAHNRLV
MAB_3721c|M.abscessus_ATCC_199      PNATKDSDGRLLVGAAVGVGEDAWTRAMSLVDAGVDVLIVDTAHAHNRKV
                                        :..  :  :  .                                  

Mflv_2670|M.gilvum_PYR-GCK          --------------------------------------------------
Mvan_3907|M.vanbaalenii_PYR-1       --------------------------------------------------
TH_1455|M.thermoresistible__bu      --------------------------------------------------
Rv2406c|M.tuberculosis_H37Rv        --------------------------------------------------
Mb2429c|M.bovis_AF2122/97           --------------------------------------------------
MMAR_3726|M.marinum_M               --------------------------------------------------
MUL_3669|M.ulcerans_Agy99           --------------------------------------------------
MAV_1776|M.avium_104                --------------------------------------------------
MSMEG_4564|M.smegmatis_MC2_155      --------------------------------------------------
MLBr_00387|M.leprae_Br4923          LDMVGKLKVEIGDRVQVIGGNVATRSAAAALVEAGADAVKVGVGPGSTCT
MAB_3721c|M.abscessus_ATCC_199      LDMVGKLKAEVGERVDVVGGNVATRSAAAALVEAGADAVKVGVGPGSICT
                                                                                      

Mflv_2670|M.gilvum_PYR-GCK          --------------------------------------------------
Mvan_3907|M.vanbaalenii_PYR-1       --------------------------------------------------
TH_1455|M.thermoresistible__bu      --------------------------------------------------
Rv2406c|M.tuberculosis_H37Rv        --------------------------------------------------
Mb2429c|M.bovis_AF2122/97           --------------------------------------------------
MMAR_3726|M.marinum_M               --------------------------------------------------
MUL_3669|M.ulcerans_Agy99           --------------------------------------------------
MAV_1776|M.avium_104                --------------------------------------------------
MSMEG_4564|M.smegmatis_MC2_155      --------------------------------------------------
MLBr_00387|M.leprae_Br4923          TRVVAGVGAPQITAILEAVAACGPAGVPVIADGGLQYSGDIAKALAAGAS
MAB_3721c|M.abscessus_ATCC_199      TRVVAGVGAPQITAILEAATVCHPAGVPVIADGGMQYSGDIAKALAAGAS
                                                                                      

Mflv_2670|M.gilvum_PYR-GCK          --------------------------------------------------
Mvan_3907|M.vanbaalenii_PYR-1       --------------------------------------------------
TH_1455|M.thermoresistible__bu      --------------------------------------------------
Rv2406c|M.tuberculosis_H37Rv        --------------------------------------------------
Mb2429c|M.bovis_AF2122/97           --------------------------------------------------
MMAR_3726|M.marinum_M               --------------------------------------------------
MUL_3669|M.ulcerans_Agy99           --------------------------------------------------
MAV_1776|M.avium_104                --------------------------------------------------
MSMEG_4564|M.smegmatis_MC2_155      --------------------------------------------------
MLBr_00387|M.leprae_Br4923          TTMLGSLLAGTAEAPGELIFVNGKQFKSYRGMGSLGAMQGRGGDKSYSKD
MAB_3721c|M.abscessus_ATCC_199      TTMLGSLLAGTAESPGELIFVNGKQFKSYRGMGSMGAMQGRGATKSYSKD
                                                                                      

Mflv_2670|M.gilvum_PYR-GCK          --------------------------------------------------
Mvan_3907|M.vanbaalenii_PYR-1       --------------------------------------------------
TH_1455|M.thermoresistible__bu      --------------------------------------------------
Rv2406c|M.tuberculosis_H37Rv        --------------------------------------------------
Mb2429c|M.bovis_AF2122/97           --------------------------------------------------
MMAR_3726|M.marinum_M               --------------------------------------------------
MUL_3669|M.ulcerans_Agy99           --------------------------------------------------
MAV_1776|M.avium_104                --------------------------------------------------
MSMEG_4564|M.smegmatis_MC2_155      --------------------------------------------------
MLBr_00387|M.leprae_Br4923          RYFADDALSEDKLVPEGIEGRVPFRGPLSSVIHQLVGGLRAAMGYTGSPT
MAB_3721c|M.abscessus_ATCC_199      RYFQDDVLSEDKLVPEGIEGRVPFRGPLSTVMHQLTGGLRAAMGYTGASS
                                                                                      

Mflv_2670|M.gilvum_PYR-GCK          -------------------------------------
Mvan_3907|M.vanbaalenii_PYR-1       -------------------------------------
TH_1455|M.thermoresistible__bu      -------------------------------------
Rv2406c|M.tuberculosis_H37Rv        -------------------------------------
Mb2429c|M.bovis_AF2122/97           -------------------------------------
MMAR_3726|M.marinum_M               -------------------------------------
MUL_3669|M.ulcerans_Agy99           -------------------------------------
MAV_1776|M.avium_104                -------------------------------------
MSMEG_4564|M.smegmatis_MC2_155      -------------------------------------
MLBr_00387|M.leprae_Br4923          IEVLQQAQFVRITPAGLKESHPHDVAMTVEAPNYYPR
MAB_3721c|M.abscessus_ATCC_199      IEELQRAQFVQITAAGLKESHPHDITMTAEAPNYYVR