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TPGLLTTAGAGRPRDRCARIVCTVFIETAVVATMFVALLGLSTISSKADDIDWDAIAQCESGGNWAANTG NGLYGGLQISQATWDSNGGVGSPAAASPQQQIEVADNIMKTQGPGAWPKCSSCSQGDAPLGSLTHILTFL AAETGGCSGSRDD*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv2389c | rpfD | - | 100% (154) | PROBABLE RESUSCITATION-PROMOTING FACTOR RPFD |
| M. tuberculosis H37Rv | Rv1884c | rpfC | 1e-27 | 55.00% (100) | resuscitation-promoting factor RpfC |
| M. tuberculosis H37Rv | Rv2450c | rpfE | 4e-24 | 60.27% (73) | resuscitation-promoting factor RpfE |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2410c | rpfD | 1e-88 | 100.00% (154) | resuscitation-promoting factor RpfD |
| M. gilvum PYR-GCK | Mflv_2620 | - | 3e-29 | 57.89% (95) | transglycosylase domain-containing protein |
| M. leprae Br4923 | MLBr_02030 | - | 7e-29 | 47.93% (121) | hypothetical protein MLBr_02030 |
| M. abscessus ATCC 19977 | MAB_4080c | - | 6e-32 | 47.73% (132) | hypothetical protein MAB_4080c |
| M. marinum M | MMAR_2772 | - | 2e-31 | 59.38% (96) | resuscitation-promoting factor-like protein |
| M. avium 104 | MAV_1722 | - | 5e-26 | 63.51% (74) | secreted protein |
| M. smegmatis MC2 155 | MSMEG_4640 | - | 4e-30 | 56.84% (95) | secreted protein |
| M. thermoresistible (build 8) | TH_0358 | - | 3e-28 | 54.26% (94) | PROBABLE RESUSCITATION-PROMOTING FACTOR RPFE |
| M. ulcerans Agy99 | MUL_2975 | - | 3e-31 | 58.33% (96) | resuscitation-promoting factor-like protein |
| M. vanbaalenii PYR-1 | Mvan_3961 | - | 9e-30 | 51.89% (106) | transglycosylase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_2620|M.gilvum_PYR-GCK ------------MN-----VRKLAGKGLMAAAISGALAVVPMALDG----
Mvan_3961|M.vanbaalenii_PYR-1 ------------MN-----VRKVVSKGLMAAAISGALAVVPMAMDG----
MSMEG_4640|M.smegmatis_MC2_155 -----------------------MKRAFGLTALAGALAMGPMVLS-----
TH_0358|M.thermoresistible__bu ------------MNNIRKALTSSLKRALLLIAGTAALALVPMVLS-----
Rv2389c|M.tuberculosis_H37Rv --MTPGLLTTAGAGRPRDRCARIVCTVFIETAVVATMFVALLGLS-----
Mb2410c|M.bovis_AF2122/97 --MTPGLLTTAGAGRPRDRCARIVCTVFIETAVVATMFVALLGLS-----
MMAR_2772|M.marinum_M --------------------MTHIAKPLTKSALAGGFVVASMSLS-----
MUL_2975|M.ulcerans_Agy99 ---------MATSAEKSD--MTHIAKPLTKSALAGGFVVASMSLS-----
MLBr_02030|M.leprae_Br4923 ---------MDMPGEMLD--VRKLCKLFVKSAVVSGIVTASMALS-----
MAB_4080c|M.abscessus_ATCC_199 ---------MDRARWVRD--RRAVCLIFT------VLFMMSLSMT-----
MAV_1722|M.avium_104 MGFDPNVPAAGPAPDAPPPPAPDAPPAPAPDAPPAPDAPPPPAPDAPPPP
Mflv_2620|M.gilvum_PYR-GCK --GTATAHADSV-----------NWDAIAQCESGGNWAINTGNGHFGGLQ
Mvan_3961|M.vanbaalenii_PYR-1 --TTATAHADSV-----------NWDAIAQCESGGNWAINTGNGHFGGLQ
MSMEG_4640|M.smegmatis_MC2_155 ---PATAAADSV-----------NWDAIAACESGGNWSTNTGNGHYGGLQ
TH_0358|M.thermoresistible__bu ---TATAQADTV-----------NWDAIAQCESGGNWASDTGNGFYGGLQ
Rv2389c|M.tuberculosis_H37Rv ---TISSKADDI-----------DWDAIAQCESGGNWAANTGNGLYGGLQ
Mb2410c|M.bovis_AF2122/97 ---TISSKADDI-----------DWDAIAQCESGGNWAANTGNGLYGGLQ
MMAR_2772|M.marinum_M ---TGVAQADLM-----------NWEAVAQCESGGNWSANTGNGAYGGLQ
MUL_2975|M.ulcerans_Agy99 ---TGVAQADLM-----------NWEAVAQCESGGNWSVNTGNGAYGGLQ
MLBr_02030|M.leprae_Br4923 ---TSTGMANAVPR-------EPNWDAVAQCESGRNWRANTGNGFYGGLQ
MAB_4080c|M.abscessus_ATCC_199 ---ASVASADSM-----------NWDAVAECESGGNWSANTGNGFYGGLQ
MAV_1722|M.avium_104 APDAPPAPGPDVPPPPAPKAYSVNWDAIAQCESGGNWGINTGNGYAGGLQ
. . . : :*:*:* **** ** :**** ****
Mflv_2620|M.gilvum_PYR-GCK FKQATWSANGGVGNPARAPRHEQIRVAENVLRTQGIKAWPKCGAKGMAAQ
Mvan_3961|M.vanbaalenii_PYR-1 FKQATWSANGGVGNPAAAPRHEQIRVAENVLRTQGLKAWPKCGAKGMAAQ
MSMEG_4640|M.smegmatis_MC2_155 FKQSTWAAHGGVGSPATASREQQIAVAENVLRTQGLAAWPKCGARGGVPA
TH_0358|M.thermoresistible__bu FKPSTWAAHGGTGSPARASREEQIRVAERVLASQGLKAWPKCGAHGTRPA
Rv2389c|M.tuberculosis_H37Rv ISQATWDSNGGVGSPAAASPQQQIEVADNIMKTQGPGAWPKCS-------
Mb2410c|M.bovis_AF2122/97 ISQATWDSNGGVGSPAAASPQQQIEVADNIMKTQGPGAWPKCS-------
MMAR_2772|M.marinum_M FKQATWEEYGGVGNPASASKQQQIAIANRVLAGQGPAAWPKCS-------
MUL_2975|M.ulcerans_Agy99 FKQATWEEYGGVGNPASASKQQQIAIANRVLAGQGPAAWPKCS-------
MLBr_02030|M.leprae_Br4923 FKPTIWARYGGVGNPAGASREQQITVANRVLADQGLDAWPKCG-------
MAB_4080c|M.abscessus_ATCC_199 FKPSTWAAHGGVGNPAEASREEQIAVAEDVLRTQGPGAWPKCGGG-----
MAV_1722|M.avium_104 FTSSTWHANGGSGSPAGASREEQIRVAENVLHSQGIGAWPVCG-------
:. : * ** *.** *. .:** :*: :: ** *** *.
Mflv_2620|M.gilvum_PYR-GCK VWGNPAPSAPVPAVTPAATPGRANGCATMPTSVFGGIVDLRKMCTALFVP
Mvan_3961|M.vanbaalenii_PYR-1 VWGNTAPTAPVPATVPAATPGRANGCATMPTSVFGGVLDLRKMCTALFTP
MSMEG_4640|M.smegmatis_MC2_155 VWGG-GAGAPAAG----------SGCSAVRPGAVLGILDLRRLCSTLLDP
TH_0358|M.thermoresistible__bu VFR--TPGAPAAGGVPASTPTATTGCGAIRPGAVLGLVDLRQVCAAFLTP
Rv2389c|M.tuberculosis_H37Rv ---------------------SCSQGDAPLGSLTHILTFLAAETGGCSGS
Mb2410c|M.bovis_AF2122/97 ---------------------SCSQGDAPLGSLTHILTFLAAETGGCSGS
MMAR_2772|M.marinum_M ---------------------SAGGLPPVPVVLPKPVRQLEQTVTQIISI
MUL_2975|M.ulcerans_Agy99 ---------------------SAGGLPPVPVVLPKPVRQLEQTVTQVISI
MLBr_02030|M.leprae_Br4923 ---------------------AASDLP--ITLWSHPAQGVKQIINDIIQM
MAB_4080c|M.abscessus_ATCC_199 ------------------GIGGGAGCQFVPGGSIFGIVNFRQMCNGVMGL
MAV_1722|M.avium_104 ----------------------RRG-------------------------
Mflv_2620|M.gilvum_PYR-GCK RSAR---------
Mvan_3961|M.vanbaalenii_PYR-1 RSAR---------
MSMEG_4640|M.smegmatis_MC2_155 LGAFGR-------
TH_0358|M.thermoresistible__bu LGVG---------
Rv2389c|M.tuberculosis_H37Rv RDD----------
Mb2410c|M.bovis_AF2122/97 RDD----------
MMAR_2772|M.marinum_M FTPR---------
MUL_2975|M.ulcerans_Agy99 FTPR---------
MLBr_02030|M.leprae_Br4923 GDTTLAAIALNGL
MAB_4080c|M.abscessus_ATCC_199 IPPAG--------
MAV_1722|M.avium_104 -------------