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HPLPADHGRSRCNRHPISPLSLIGNASATSGDMSSMTRIAKPLIKSAMAAGLVTASMSLSTAVAHAGPSP NWDAVAQCESGGNWAANTGNGKYGGLQFKPATWAAFGGVGNPAAASREQQIAVANRVLAEQGLDAWPTCG AASGLPIALWSKPAQGIKQIINEIIWAGIQASIPR*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. tuberculosis H37Rv | Rv1884c | rpfC | - | 100% (176) | PROBABLE RESUSCITATION-PROMOTING FACTOR RPFC |
| M. tuberculosis H37Rv | Rv2389c | rpfD | 1e-27 | 55.00% (100) | resuscitation-promoting factor RpfD |
| M. tuberculosis H37Rv | Rv2450c | rpfE | 3e-25 | 59.77% (87) | resuscitation-promoting factor RpfE |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1916c | rpfC | 1e-101 | 100.00% (176) | resuscitation-promoting factor RpfC |
| M. gilvum PYR-GCK | Mflv_2620 | - | 3e-33 | 58.62% (116) | transglycosylase domain-containing protein |
| M. leprae Br4923 | MLBr_02030 | - | 6e-54 | 70.21% (141) | hypothetical protein MLBr_02030 |
| M. abscessus ATCC 19977 | MAB_4080c | - | 7e-32 | 70.79% (89) | hypothetical protein MAB_4080c |
| M. marinum M | MMAR_2772 | - | 6e-44 | 65.15% (132) | resuscitation-promoting factor-like protein |
| M. avium 104 | MAV_2818 | - | 4e-47 | 75.22% (113) | resuscitation-promoting factor RpfA |
| M. smegmatis MC2 155 | MSMEG_4640 | - | 2e-34 | 65.71% (105) | secreted protein |
| M. thermoresistible (build 8) | TH_0358 | - | 5e-34 | 62.96% (108) | PROBABLE RESUSCITATION-PROMOTING FACTOR RPFE |
| M. ulcerans Agy99 | MUL_2975 | - | 1e-45 | 62.86% (140) | resuscitation-promoting factor-like protein |
| M. vanbaalenii PYR-1 | Mvan_3961 | - | 2e-33 | 57.63% (118) | transglycosylase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment
Rv1884c|M.tuberculosis_H37Rv MHPLPADHGRSRCNRHPISPLSLIGNASATSGDMSSMTRIAKPLIKSAMA
Mb1916c|M.bovis_AF2122/97 MHPLPADHGRSRCNRHPISPLSLIGNASATSGDMSSMTRIAKPLIKSAMA
MAV_2818|M.avium_104 --------------------------------------------------
MLBr_02030|M.leprae_Br4923 ---------------------------MDMPGEMLDVRKLCKLFVKSAVV
MMAR_2772|M.marinum_M ------------------------------------MTHIAKPLTKSALA
MUL_2975|M.ulcerans_Agy99 ---------------------------MATSAEKSDMTHIAKPLTKSALA
Mflv_2620|M.gilvum_PYR-GCK ----------------------------MN-----VRKLAGKGLMAAAIS
Mvan_3961|M.vanbaalenii_PYR-1 ----------------------------MN-----VRKVVSKGLMAAAIS
MSMEG_4640|M.smegmatis_MC2_155 ---------------------------------------MKRAFGLTALA
TH_0358|M.thermoresistible__bu ----------------------------MNNIRKALTSSLKRALLLIAGT
MAB_4080c|M.abscessus_ATCC_199 ----------------------------MDR-----ARWVRDRRAVCLIF
Rv1884c|M.tuberculosis_H37Rv AGLVTASMSLST--AVAHAGP-SPNWDAVAQCESGGNWAANTGNGKYGGL
Mb1916c|M.bovis_AF2122/97 AGLVTASMSLST--AVAHAGP-SPNWDAVAQCESGGNWAANTGNGKYGGL
MAV_2818|M.avium_104 ---------------MVSAEP-TPNWDAIAQCESGGNWHANTGNGEYGGL
MLBr_02030|M.leprae_Br4923 SGIVTASMALSTSTGMANAVPREPNWDAVAQCESGRNWRANTGNGFYGGL
MMAR_2772|M.marinum_M GGFVVASMSLST--GVAQADL--MNWEAVAQCESGGNWSANTGNGAYGGL
MUL_2975|M.ulcerans_Agy99 GGFVVASMSLST--GVAQADL--MNWEAVAQCESGGNWSVNTGNGAYGGL
Mflv_2620|M.gilvum_PYR-GCK GALAVVPMALDGGTATAHADS--VNWDAIAQCESGGNWAINTGNGHFGGL
Mvan_3961|M.vanbaalenii_PYR-1 GALAVVPMAMDGTTATAHADS--VNWDAIAQCESGGNWAINTGNGHFGGL
MSMEG_4640|M.smegmatis_MC2_155 GALAMGPMVLS--PATAAADS--VNWDAIAACESGGNWSTNTGNGHYGGL
TH_0358|M.thermoresistible__bu AALALVPMVLS--TATAQADT--VNWDAIAQCESGGNWASDTGNGFYGGL
MAB_4080c|M.abscessus_ATCC_199 TVLFMMSLSMT--ASVASADS--MNWDAVAECESGGNWSANTGNGFYGGL
. * **:*:* **** ** :**** :***
Rv1884c|M.tuberculosis_H37Rv QFKPATWAAFGGVGNPAAASREQQIAVANRVLAEQGLDAWPTCGAASGLP
Mb1916c|M.bovis_AF2122/97 QFKPATWAAFGGVGNPAAASREQQIAVANRVLAEQGLDAWPTCGAASGLP
MAV_2818|M.avium_104 QFKPATWARYGGVGNPAAASREQQIAVANRVFAEEGVEPWPKCGAQSGLP
MLBr_02030|M.leprae_Br4923 QFKPTIWARYGGVGNPAGASREQQITVANRVLADQGLDAWPKCGAASDLP
MMAR_2772|M.marinum_M QFKQATWEEYGGVGNPASASKQQQIAIANRVLAGQGPAAWPKCSSAGGLP
MUL_2975|M.ulcerans_Agy99 QFKQATWEEYGGVGNPASASKQQQIAIANRVLAGQGPAAWPKCSSAGGLP
Mflv_2620|M.gilvum_PYR-GCK QFKQATWSANGGVGNPARAPRHEQIRVAENVLRTQGIKAWPKCGAKGMAA
Mvan_3961|M.vanbaalenii_PYR-1 QFKQATWSANGGVGNPAAAPRHEQIRVAENVLRTQGLKAWPKCGAKGMAA
MSMEG_4640|M.smegmatis_MC2_155 QFKQSTWAAHGGVGSPATASREQQIAVAENVLRTQGLAAWPKCGARGGVP
TH_0358|M.thermoresistible__bu QFKPSTWAAHGGTGSPARASREEQIRVAERVLASQGLKAWPKCGAHGTRP
MAB_4080c|M.abscessus_ATCC_199 QFKPSTWAAHGGVGNPAEASREEQIAVAEDVLRTQGPGAWPKCGGGGIGG
*** : * **.*.** *.:.:** :*: *: :* .**.*.. .
Rv1884c|M.tuberculosis_H37Rv ------------------------IALWSKPAQGIKQIINEIIWAG--IQ
Mb1916c|M.bovis_AF2122/97 ------------------------IALWSKPAQGIKQIINEIIWAG--IQ
MAV_2818|M.avium_104 ------------------------IGWYSHPAQGIKQIINGL------IQ
MLBr_02030|M.leprae_Br4923 ------------------------ITLWSHPAQGVKQIINDIIQMGDTTL
MMAR_2772|M.marinum_M PV----------------------PVVLPKPVRQLEQTVTQI------IS
MUL_2975|M.ulcerans_Agy99 PV----------------------PVVLPKPVRQLEQTVTQV------IS
Mflv_2620|M.gilvum_PYR-GCK QVWGNPAPSAPVPAVTPAATPGRANGCATMPTSVFGGIVDLRKMCTALFV
Mvan_3961|M.vanbaalenii_PYR-1 QVWGNTAPTAPVPATVPAATPGRANGCATMPTSVFGGVLDLRKMCTALFT
MSMEG_4640|M.smegmatis_MC2_155 AVWGG-GAGAPAAG----------SGCSAVRPGAVLGILDLRRLCSTLLD
TH_0358|M.thermoresistible__bu AVFR--TPGAPAAGGVPASTPTATTGCGAIRPGAVLGLVDLRQVCAAFLT
MAB_4080c|M.abscessus_ATCC_199 --------G---------------AGCQFVPGGSIFGIVNFRQMCNGVMG
. :
Rv1884c|M.tuberculosis_H37Rv ASIPR---
Mb1916c|M.bovis_AF2122/97 ASIPR---
MAV_2818|M.avium_104 AAVPR---
MLBr_02030|M.leprae_Br4923 AAIALNGL
MMAR_2772|M.marinum_M IFTPR---
MUL_2975|M.ulcerans_Agy99 IFTPR---
Mflv_2620|M.gilvum_PYR-GCK PRSAR---
Mvan_3961|M.vanbaalenii_PYR-1 PRSAR---
MSMEG_4640|M.smegmatis_MC2_155 PLGAFGR-
TH_0358|M.thermoresistible__bu PLGVG---
MAB_4080c|M.abscessus_ATCC_199 LIPPAG--