For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTSTTRSEQLDAILRKIRQRHSNLYYPA PPDREQGDAARAIADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGESLHELQQEIEAAVRIRSDLD TPAGARDFQRFLIGKLKDIREVVATASLDAASKSALMAAWTSLYDASKGDRGDADDRGPASVGSGGAPAR GAGQQPELPTRAEPDCLLDSLLLEDPGLLADDLQVPGGTSAAIPSASSTPSLPNLGGATMPGGGATPALV PGVSAPGGLPLSGLLRGVGDEPELTDFDERGQEVRDPADYEHSNEPDERRADDREGADEDAGLGKSESPP QAPTTVTLPNGETVTAASPQLAAAIKAAASGTPIADAFQQQGIAIPLPGTAVANPVDPARISAGDVGVFT ATPLPLALAKLFWTARFNTSQPCEGQTF
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. tuberculosis H37Rv | Rv0026 | - | - | 100% (448) | hypothetical protein Rv0026 |
M. tuberculosis H37Rv | Rv0025 | - | 1e-10 | 33.04% (112) | hypothetical protein Rv0025 |
M. tuberculosis H37Rv | Rv0739 | - | 2e-08 | 36.27% (102) | hypothetical protein Rv0739 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0027 | - | 0.0 | 99.76% (420) | hypothetical protein Mb0027 |
M. gilvum PYR-GCK | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_0045 | - | 8e-89 | 53.52% (355) | hypothetical protein MMAR_0045 |
M. avium 104 | MAV_0044 | - | 1e-123 | 56.29% (437) | hypothetical protein MAV_0044 |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_3514 | - | 4e-07 | 24.64% (414) | PUTATIVE putative hypothetical protein Mflv_4945 |
M. ulcerans Agy99 | MUL_0044 | - | 9e-87 | 52.96% (355) | hypothetical protein MUL_0044 |
M. vanbaalenii PYR-1 | Mvan_3258 | - | 9e-05 | 25.64% (195) | hypothetical protein Mvan_3258 |
CLUSTAL 2.0.9 multiple sequence alignment Rv0026|M.tuberculosis_H37Rv -------------------------------------------------- Mb0027|M.bovis_AF2122/97 -------------------------------------------------- MAV_0044|M.avium_104 -------------------------------------------------- MMAR_0045|M.marinum_M -------------------------------------------------- MUL_0044|M.ulcerans_Agy99 -------------------------------------------------- TH_3514|M.thermoresistible__bu -------------------------------------VTGGLDVAARLAD Mvan_3258|M.vanbaalenii_PYR-1 MPAVGGSAGSYGRLIVTPDMEPPDAGHWDAQEQTYRVGATTWDGIHQKIV Rv0026|M.tuberculosis_H37Rv -----MAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTS Mb0027|M.bovis_AF2122/97 -----MAFDAAMSTHEDLLATIRYVRDRTGDPNAWQTGLTPTEVTAVVTS MAV_0044|M.avium_104 -----------MSAYDDLLAAVKDVRDRTGDPNAWQTGLAPAEVSAVITP MMAR_0045|M.marinum_M -----------MGGSE--------QRAQSG-------------------- MUL_0044|M.ulcerans_Agy99 -----------MGGSE--------QRAQSG-------------------- TH_3514|M.thermoresistible__bu GLPAVRAAQEYLSACESLGYRQPDLSGRPGQVFDWYRSEDGLDLGALADD Mvan_3258|M.vanbaalenii_PYR-1 TDNAEFRDAADSQGFDEAHRAGAVLAEEAKTIAEWHDKCANKCADIATVL : .. Rv0026|M.tuberculosis_H37Rv TTRSEQLDAILRKIRQRHSNLYYPAP-------------PDREQGDAARA Mb0027|M.bovis_AF2122/97 TTRSEQLDAILRKIRQRHSNLYYPAP-------------PDREQGDAARA MAV_0044|M.avium_104 STRPEQLQAILAKIRRQHAEVFGAAPTGVARPPADAGPAPDRESGAAADA MMAR_0045|M.marinum_M -----------------------------------------AARGAAADA MUL_0044|M.ulcerans_Agy99 -----------------------------------------AAGGAAADA TH_3514|M.thermoresistible__bu SAALDRAAARAAEVLELQDRQSAALGAGWRGVGGTAAAELLRRHGAASAA Mvan_3258|M.vanbaalenii_PYR-1 RDTRAGQEQLVREADAKIASAKLPGEAEALVTQYHGIARYQTEAGVTAAM * :: Rv0026|M.tuberculosis_H37Rv IADAEAALAHQNSATAQLDLQVVSAILNAHLKTVEGGES----------- Mb0027|M.bovis_AF2122/97 IADAEAALAHPNSATAQLDLQVVSAILNAHLKTVEGGES----------- MAV_0044|M.avium_104 IASAEAALAQQNSVSSQLDMQVVTAILNAHLKAVDGREA----------- MMAR_0045|M.marinum_M IAGAEVALAHQNSMSSQLDLQVIAAILNAHLTAVDGSEA----------- MUL_0044|M.ulcerans_Agy99 IAGAKVALAHQNSMSSQLDLQVIAAILNAHLTAVDGSEA----------- TH_3514|M.thermoresistible__bu ATAALRTAADALTTLRTELWQLVDRKVTATQGIDGGGRT----------- Mvan_3258|M.vanbaalenii_PYR-1 ASHTAFKASTENTRALDLLTKWGDAPTAPPVQPVDHTSPGIEQDENPYSD : : : : : . . Rv0026|M.tuberculosis_H37Rv -------------LHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKD Mb0027|M.bovis_AF2122/97 -------------LHELQQEIEAAVRIRSDLDTPAGARDFQRFLIGKLKD MAV_0044|M.avium_104 -------------LTKLQQETEAAVRTRSDLDTPAGARDFQRFLIGKLRD MMAR_0045|M.marinum_M -------------LDELQQETEAAVRTRSDLDTPAGARDFQRFLIGKLRD MUL_0044|M.ulcerans_Agy99 -------------LDELQQETEAAVRTRSDLDTLAGARDFQRFLIGKLRD TH_3514|M.thermoresistible__bu -------------DWQAAAHTVLTGAGDRSVASELVDAEVKPFVDEAIGC Mvan_3258|M.vanbaalenii_PYR-1 TEKREAGADAPKPVDDAPTDPAGTSTTQPGVSPGSKSAAGDESIKAATGP . . : .: . . : Rv0026|M.tuberculosis_H37Rv IREVVATASLDAASKSALMAAWTSLYDASKGDRGDADDRGPASVGSGGAP Mb0027|M.bovis_AF2122/97 IREVVATASLDAASKSALMAAWTSLYDASKGDRGDADDRGPASVGSGGAP MAV_0044|M.avium_104 IRAVVLNASLDDTSKSALMAAWTSLYDAAKNDR--PGDHASSAGAAADAA MMAR_0045|M.marinum_M IREVVATASLDDTSKATLMAAWTSLYNASKQEASSPGDVPTATEPAAGTG MUL_0044|M.ulcerans_Agy99 IREVVATASLDDTSKATLMAAWTSLYNASKQEASSPGDAQTATEPAAGTG TH_3514|M.thermoresistible__bu EWLTVMNQTLTSIEEKFDAAIAELTGSAAVPDFGAGEGEAPPWAANWGPP Mvan_3258|M.vanbaalenii_PYR-1 VTQPTPGVTSSPAASALGGAGMPSMGGIGGGGMGSGGGIPKMPGGLGSGG . : . * . . . . Rv0026|M.tuberculosis_H37Rv ARGAGQQPEL---------------------------------------- Mb0027|M.bovis_AF2122/97 ARGAGQQPEL---------------------------------------- MAV_0044|M.avium_104 AAGTSDQPDE---------------------------------------- MMAR_0045|M.marinum_M ADAVRAAG------------------------------------------ MUL_0044|M.ulcerans_Agy99 PDADRAAG------------------------------------------ TH_3514|M.thermoresistible__bu WAANWGQPGA---------------------------------------- Mvan_3258|M.vanbaalenii_PYR-1 MPGMGSNPLSGGVGQMPGAASGLPNPGAVPGAGSASPLSSAFNQGMATTA . Rv0026|M.tuberculosis_H37Rv ------PTRAEPDCLLDSLLLEDPGLLAD---DLQVPGG-TSAAIPSASS Mb0027|M.bovis_AF2122/97 ------PTRAEPDCLLDSLLLEDPGLLAD---DLQVPGG-TSAAIPSASS MAV_0044|M.avium_104 ------DLDDEWDPLLDSLLADDDGSPIDPAAALDPLGGNTIPPAPPPAM MMAR_0045|M.marinum_M --------LTSGDPLLDSLLFDDPGLVAE----APLPQGAAPSGAATAPA MUL_0044|M.ulcerans_Agy99 --------LISGDPLLDSLLFDDPGLVDE----ATLPQGAAPSGAATAPS TH_3514|M.thermoresistible__bu ------ASWGSP-PVADGAASAIGADPAP---AEAAAPGVPPPAVPPTGP Mvan_3258|M.vanbaalenii_PYR-1 GMGGGIPSAPPPAPASPSPALSAGGGHAAPPVSAAPGGGVSPAGAQAGMV . . * . . . Rv0026|M.tuberculosis_H37Rv TPSLPNLGGATMPGGG-------------------------ATPALVPGV Mb0027|M.bovis_AF2122/97 TPSLPNLGGATMPGGG-------------------------ATPALVPGV MAV_0044|M.avium_104 APALPSFGGGSLPGLG-------------------------ATPASMSGW MMAR_0045|M.marinum_M LPSMPSLGDGSGAATP-------------------------SGAGSVP-- MUL_0044|M.ulcerans_Agy99 LPSMPSLGDGSGAATP-------------------------SGAGSVP-- TH_3514|M.thermoresistible__bu GGGLPDPGAGLSTVGR-------------------------QLVDLLGGL Mvan_3258|M.vanbaalenii_PYR-1 SPATPAAAAPTGAGIGGGGAPMMLPPGSMGPPAGAPPPAPTVPAGTVGST . * . . : Rv0026|M.tuberculosis_H37Rv SAPGGLPLSGLLRGVGDEP-ELTDFDERGQEVRD----PADYEHSNEPDE Mb0027|M.bovis_AF2122/97 SAPGGLPLSGLLRGVGDEP-ELTDFDERGQEVRD----PADYEHSNEPDE MAV_0044|M.avium_104 ETPGGLPLSGLQAGDASDP-ALQDLADEDLPEDQ----GQQHDSPADGSA MMAR_0045|M.marinum_M NLPAGPALSAIPRAIASRLDELDDPSLDSLALDP----DDSDDEPADLDE MUL_0044|M.ulcerans_Agy99 NLPAGPALSAIPRAIASRLDELDDPSLDSLALDPDASGDDSDDEPADLDE TH_3514|M.thermoresistible__bu LGPVGEALGNGVGAAGVDPMGGEDAGGEDAGTEERDGASDADTDAEDDDR Mvan_3258|M.vanbaalenii_PYR-1 NAPAAPAPSAASAAAGPTLIPASVVAAGQTAAARERRESADAAAAKELVW * . . . . . . : Rv0026|M.tuberculosis_H37Rv RRADDREGADEDAG---LGKSESPPQAPTTVTLPNGETVTAASPQLAAAI Mb0027|M.bovis_AF2122/97 RRADDREGADEDAG---LGKSESPPQAPTTVTLPNGETVTAASPQLAAAI MAV_0044|M.avium_104 EQADD-ENASADE----------PPAGPTSVTLPDGETVTAASPQLAAAI MMAR_0045|M.marinum_M DTDGGGEDTEQPAS---SGEPQPLPTGPTTVTLPNGDTITAASPELAAAI MUL_0044|M.ulcerans_Agy99 DTDGGGEDTEQPAS---SGEPQPLPTGPTTVTLPNGDTITAASPELAAAI TH_3514|M.thermoresistible__bu GDDTPEDDTPDDGD---PDAGGSPGEDPQEAPDPEHDPDPAPGEPETHXX Mvan_3258|M.vanbaalenii_PYR-1 KLQHAAYVALNPAAGWAVGVFRSPSGTETVITSNDGSSYIPAGVFVPRSV : . : .. ... . Rv0026|M.tuberculosis_H37Rv KAAASGTPIADAFQQ----------------------------------- Mb0027|M.bovis_AF2122/97 KAAASGTPIADAFQQ----------------------------------- MAV_0044|M.avium_104 KAAVAGTPIAEAFQQ----------------------------------- MMAR_0045|M.marinum_M NATAGGAAIADAFQQ----------------------------------- MUL_0044|M.ulcerans_Agy99 NAAAGGAAIADAFQQ----------------------------------- TH_3514|M.thermoresistible__bu XAGPGDVAIDFSGST----------------------------------- Mvan_3258|M.vanbaalenii_PYR-1 RVLATDPLVDDSFRQRWFGWGDPARVLVEYAQLRAQWGWKLVAAATTAGV . . : : Rv0026|M.tuberculosis_H37Rv -----------------------QGIAIPLPGTAVA-------------- Mb0027|M.bovis_AF2122/97 -----------------------QGIAIPLPGTAVA-------------- MAV_0044|M.avium_104 -----------------------QGMTLPAPGTAVA-------------- MMAR_0045|M.marinum_M -----------------------QGIAIPPPGTPVS-------------- MUL_0044|M.ulcerans_Agy99 -----------------------QGIAIPPPGTPVS-------------- TH_3514|M.thermoresistible__bu -----------------------EALGEALDRLDVGGVL----------- Mvan_3258|M.vanbaalenii_PYR-1 SVLRDAGVEHPPSCSGDTNPLLQQGVDVPAPVLDDMHIHRLAVLWPEVYP :.: . Rv0026|M.tuberculosis_H37Rv --------NPVDPARISAGDVGVFTA-TPLPLALAKLFWTARFNTSQPCE Mb0027|M.bovis_AF2122/97 --------NPVDPARISAGDVGVFTDRHALALGPSKALLDGQIQHISAVR MAV_0044|M.avium_104 --------NPVDVVRVSPGDIGMFTDRHALALGPGKALLDGQIQHIATVS MMAR_0045|M.marinum_M --------DPIDPARLAAGDIGMFTDRHALALGDGNAFLDGQMQQVSSIG MUL_0044|M.ulcerans_Agy99 --------DPIDPARLAAGDIGMFRDWHALALGDGNAFLDGQIQQVSSIG TH_3514|M.thermoresistible__bu -----VLAGSVSPAPALPVDPELIVRRWLTLTGVHNYEPQHLRDAVAFLR Mvan_3258|M.vanbaalenii_PYR-1 RLLRIMDADPLCQDRIVSAVTAAMINAATTQAQVIDGGIDEALRLVWAVR ..: . : . Rv0026|M.tuberculosis_H37Rv G----QTF------------------------------------------ Mb0027|M.bovis_AF2122/97 G----RNFLGWIHP---AATATAPARTEAPTPTRPAAAR----------- MAV_0044|M.avium_104 G----PSFLGWEHPPAAAASVTAPAKPDPPTPTRPASSSTT--------- MMAR_0045|M.marinum_M G----PNFLGWQHPP-TSTTVTAPAQTGAPTPTRPATTPVAPRY------ MUL_0044|M.ulcerans_Agy99 G----PNFLGWQHPP-TSTTVTEPAQTGAPTPTRPATTPVAPRY------ TH_3514|M.thermoresistible__bu HS---RDRFDWPALVDDPVGLDDIAAALMPAPTGRLRKAVSPGLPPRTAA Mvan_3258|M.vanbaalenii_PYR-1 GSDREPTVQQWADYDKAAKALNVMTAMRRPAFATNTGAVADPSDTTEFLA Rv0026|M.tuberculosis_H37Rv -------------------------------------------------- Mb0027|M.bovis_AF2122/97 -------------------------------------------------- MAV_0044|M.avium_104 -------------------------------------------------- MMAR_0045|M.marinum_M -------------------------------------------------- MUL_0044|M.ulcerans_Agy99 -------------------------------------------------- TH_3514|M.thermoresistible__bu RNSPGSRPPDS--------------------------------------- Mvan_3258|M.vanbaalenii_PYR-1 DYRAHWLVARTAEHIGGWSRRPLPLPDMCYAAAATGDPDLRDMIVKALVS Rv0026|M.tuberculosis_H37Rv ----------- Mb0027|M.bovis_AF2122/97 ----------- MAV_0044|M.avium_104 ----------- MMAR_0045|M.marinum_M ----------- MUL_0044|M.ulcerans_Agy99 ----------- TH_3514|M.thermoresistible__bu ----------- Mvan_3258|M.vanbaalenii_PYR-1 VEEDLQYEAPR