For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
aa seq not available
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. thermoresistible (build 8) | TH_3514 | - | - | 100% (546) | putative hypothetical protein Mflv_4945 |
| M. thermoresistible (build 8) | TH_3241 | - | 3e-06 | 41.77% (79) | PUTATIVE putative FHA domain containing protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3469c | - | 3e-56 | 34.12% (466) | hypothetical protein Mb3469c |
| M. gilvum PYR-GCK | Mflv_4945 | - | 2e-67 | 37.53% (469) | hypothetical protein Mflv_4945 |
| M. tuberculosis H37Rv | Rv3439c | - | 3e-56 | 34.12% (466) | hypothetical protein Rv3439c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3746c | - | 1e-27 | 25.96% (443) | hypothetical protein MAB_3746c |
| M. marinum M | MMAR_1110 | - | 4e-48 | 35.43% (429) | hypothetical protein MMAR_1110 |
| M. avium 104 | MAV_4382 | - | 8e-57 | 34.95% (455) | hypothetical protein MAV_4382 |
| M. smegmatis MC2 155 | MSMEG_4400 | - | 3e-27 | 55.45% (110) | alcohol dehydrogenase, zinc-containing |
| M. ulcerans Agy99 | MUL_0868 | - | 2e-48 | 35.43% (429) | hypothetical protein MUL_0868 |
| M. vanbaalenii PYR-1 | Mvan_1474 | - | 2e-71 | 40.63% (443) | hypothetical protein Mvan_1474 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb3469c|M.bovis_AF2122/97 MADRLNVAERLAEGRPAAEHTQSYVRACHLVG------YQHPDLTAYPAQ
Rv3439c|M.tuberculosis_H37Rv MADRLNVAERLAEGRPAAEHTQSYVRACHLVG------YQHPDLTAYPAQ
MAV_4382|M.avium_104 MADRLDVAGRLAEGRAGVEHTQTYVQACHALG------YQHPDLTAHPAQ
MMAR_1110|M.marinum_M MTNGLAVAQRLDEGRPAVDHTRRYLRACQQLG------YQDPVLAKGFDP
MUL_0868|M.ulcerans_Agy99 MTNGLAVAQRLDEGRPAVDHTRRYLRACQQLG------YQDPFLAKGFDP
Mflv_4945|M.gilvum_PYR-GCK MPDDFDVGARLAQGRPAADTLQRYVAACRQLG------YEHRDLTLHPAQ
Mvan_1474|M.vanbaalenii_PYR-1 MSENFDAASRLAQGRPAVEELQHYVWASHLLG------YQHPDLTMHASQ
TH_3514|M.thermoresistible__bu VTGGLDVAARLADGLPAVRAAQEYLSACESLG------YRQPDLSGRPGQ
MAB_3746c|M.abscessus_ATCC_199 MANKWDIEALRGEGLQAIANSQNYVTAAIRGNGKSPVTITNPDLTANERQ
MSMEG_4400|M.smegmatis_MC2_155 MEENATTFTELSHTRAAIWRGG-----------------GDVVIESVPLP
: . . . :
Mb3469c|M.bovis_AF2122/97 IHDWYGSEDGLDLHALDADCAQLRAAASVLMEALRMERSQVAVLAAAWTG
Rv3439c|M.tuberculosis_H37Rv IHDWYGSEDGLDLHALDADCAQLRAAASVLMEALRMERSQVAVLAAAWTG
MAV_4382|M.avium_104 VREWYAGEDGLDLRALDRDCAELRAAGVVAAEALRLQRAQVAELAVAWTG
MMAR_1110|M.marinum_M IGDRYDSEDGLDLYLLDGDCARLRAAGATIAEALGMQRGQVGALAMAWTG
MUL_0868|M.ulcerans_Agy99 IGDRYDSEDGLDLYLLDGDCARLRAAGATIAEALGMQRGQVGALAMAWTG
Mflv_4945|M.gilvum_PYR-GCK VTDWYGTEDGMDLAALHRCCVALDGVGRAAQEALAVQERQLGELSAAWEG
Mvan_1474|M.vanbaalenii_PYR-1 VRDWYGTEDGMDLGALQRDCLALDAAVRASQDALAVQERQLAQLSVVWHG
TH_3514|M.thermoresistible__bu VFDWYRSEDGLDLGALADDSAALDRAAARAAEVLELQDRQSAALGAGWRG
MAB_3746c|M.abscessus_ATCC_199 LFDWYDMDAGMDLNTLGGDLELFKNATATMKAAAERQHGQLQRLIGLWEG
MSMEG_4400|M.smegmatis_MC2_155 VLQTGEVLVRVRLATVCGSDRHTVTGRRPQPCPSVLGHETVGEIVALGDG
: : : * : : *
Mb3469c|M.bovis_AF2122/97 SGADAAVHFVQRHCETGNSVVTEVRAAAQRCESLRDNLWQLVDSKVATAI
Rv3439c|M.tuberculosis_H37Rv SGADAAVHFVQRHCETGNSVVTEVRAAAQRCESLRDNLWQLVDSKVATAI
MAV_4382|M.avium_104 AGGEAAVQLLQRHCDTAEALATELRAAAQRCESLRDNLWYLIDAKAATAI
MMAR_1110|M.marinum_M PGADAAVNFLQRHVEAGQRIVAEVRAAALGCESLREDLWRLVDTKVESVI
MUL_0868|M.ulcerans_Agy99 PGADAAVNFLQRHVEAGQRIVAEVRAAALGCESLREDLWRLVDMKVESVI
Mflv_4945|M.gilvum_PYR-GCK AGGDAARMFLARHGDSSAVATAAVRTAAEALVSLREELWRVVGGKVDSTV
Mvan_1474|M.vanbaalenii_PYR-1 SGGEAARDLLRRHGAASAAVAAAVRTAAEALTALREDLWKALGAKADATV
TH_3514|M.thermoresistible__bu VGGTAAAELLRRHGAASAAATAALRTAADALTTLRTELWQLVDRKVTATQ
MAB_3746c|M.abscessus_ATCC_199 KGSESANDFLKTHNSTADAVTDEFGKVSTGLDGLRNALWNIVDLKKQAST
MSMEG_4400|M.smegmatis_MC2_155 EPLAVDGNPLGKGRRVVWSVTLPCGTCDRCVAGVTAKCRTLRKAGHES--
: . : :
Mb3469c|M.bovis_AF2122/97 AIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQQIQPYVDDDVRNDW
Rv3439c|M.tuberculosis_H37Rv AIDERALAQRPAWLAAAEALTTEGADRPTAVEVVRQQIQPYVDDDVRNDW
MAV_4382|M.avium_104 AVDDRTRAQRPEWLAAAAAVTAGQPDRDDAHNVIRQKVIPYVDNDIRNEW
MMAR_1110|M.marinum_M AIDDRTLARRPAWLAACAEVGAGAAPGSAAAELVRHQINPYLDNDIRDDW
MUL_0868|M.ulcerans_Agy99 AIDDRTLARRPAWLAACAEVGGGAAPGSAAAELVRHQINPYLDNDIRDDW
Mflv_4945|M.gilvum_PYR-GCK SAEGRAAGAQAQWSAAATSVTTGTGDTATAGEIVEHAVKPFVDTVIRDEW
Mvan_1474|M.vanbaalenii_PYR-1 AGGERAGDSRARWLAAATTVVTGAGDRATASELVEQEVKPFVAGPVATDW
TH_3514|M.thermoresistible__bu GIDG---GGRTDWQAAAHTVLTGAGDRSVASELVDAEVKPFVDEAIGCEW
MAB_3746c|M.abscessus_ATCC_199 MVDG-LVTDRTHFDSAVATYKTGMGDKSQADETNATMIGPHVKNNIEGQL
MSMEG_4400|M.smegmatis_MC2_155 --------LYSAWPLSGGYAEHVVLPRGMPVAVVADDIADALAAPAACAT
. : : . : :
Mb3469c|M.bovis_AF2122/97 LTTMRSTTAGVAASYDAVTDQLASAPRA-HFEIPDDLGPGRQPSPAS---
Rv3439c|M.tuberculosis_H37Rv LTTMRSTTAGVAASYDAVTDQLASAPRA-HFEIPDDLGPGRQPSPAS---
MAV_4382|M.avium_104 LTAMRSATDGVQTSYAMVVDRMAAAPAA-RFELPGDLGSGLVPVPATRPL
MMAR_1110|M.marinum_M LGAMRAATAGIGAAYTTLADRLTSSVPV-SFDHPDDLGSGPQSPPVP---
MUL_0868|M.ulcerans_Agy99 LGAMRAATAGIGAAYTTLADRLTSSVPV-SFDHPDDLGSGRQSPPVP---
Mflv_4945|M.gilvum_PYR-GCK LPAMQDAVAAVTAAYDGATAEIAAERTP-TFDVPGDLGPDCPEP-RPSCD
Mvan_1474|M.vanbaalenii_PYR-1 LTAVQQAVASVSTAYERSVAEIAAEQSP-VFDIPGDLGPAWTQPPMSTCD
TH_3514|M.thermoresistible__bu LTVMNQTLTSIEEKFDAAIAELTGSAAVPDFGAGEGEAPPWAANWGPPWA
MAB_3746c|M.abscessus_ATCC_199 LPAFKKAWSAGGGAYDTLINGLKQELPPDFKLPPGVFGPDYDTTDEPAKT
MSMEG_4400|M.smegmatis_MC2_155 ATVMAVIERALPVGGRRVVVIGAGMLGLTALAAAADLGASTVTAVDP---
.. . .. .
Mb3469c|M.bovis_AF2122/97 -----------------VPAQPSATAAITPAAALPPPDPVPAVTSRPVTP
Rv3439c|M.tuberculosis_H37Rv -----------------VPAQPSATAAITPAAALPPPDPVPAVTSRPVTP
MAV_4382|M.avium_104 VAAPMPPLDAAPTLPDAAPTLPAAVSEPAAAATLPAAAPTPAAVPPAAAA
MMAR_1110|M.marinum_M --------------------SALAAIAPAAATSAPAPDPEPAFAASPAVP
MUL_0868|M.ulcerans_Agy99 --------------------SALAAIAPAAATSAPAPDPEPAFAASPAVP
Mflv_4945|M.gilvum_PYR-GCK DEGQSGRADVA------ASPPAAAMSAAWS-PPAGMPAGTPAATAPSAWS
Mvan_1474|M.vanbaalenii_PYR-1 EHG---ADDAP------PGPPAGTVPSAWSGPAVVAPVEAPASAAAPAPA
TH_3514|M.thermoresistible__bu ANWGQPGAASWGSPPVADGAASAIGADPAPAEAAAPGVPPPAVPPTGPGG
MAB_3746c|M.abscessus_ATCC_199 TKGKG-----------KQDDKDGGETSGESGESGNSGVNSGAGGGTASGG
MSMEG_4400|M.smegmatis_MC2_155 --------------------SAERREIAAHFGAEVTAESVNEIEECDVLL
.
Mb3469c|M.bovis_AF2122/97 --SDFGSAPGD---GSATPAG-VGSAGGFGDAGGTG--GLGGFAG-LAGL
Rv3439c|M.tuberculosis_H37Rv --SDFGSAPGD---GSATPAG-VGSAGGFGDAGGTG--GLGGFAG-LAGL
MAV_4382|M.avium_104 PAADWGAALGD---VAGMPAGDLGGLAESGMGSGLGS-GLGGGGG-LLGL
MMAR_1110|M.marinum_M --AGIAPAPGAG-LELPTDAGDFGALGDFGGPGGLGAAGTGGLGG-LAGL
MUL_0868|M.ulcerans_Agy99 --AGIAPAPGAG-LELPTDAGDFGALGDFGGPGGLGAAGTGGLGG-LAGL
Mflv_4945|M.gilvum_PYR-GCK PPVPPAPVP-SA-PVAPAPLAAPAPEAPLPSPGS-LGSGMPGLGGGPSGF
Mvan_1474|M.vanbaalenii_PYR-1 AASAPAPAPAAA-PVPEPPLPATASAPGSTGSGMGMGPGIPDLGGGLSGL
TH_3514|M.thermoresistible__bu GLPDPGAGLSTVGRQLVDLLGGLLGPVGEALGNGVGAAGVDPMGGEDAGG
MAB_3746c|M.abscessus_ATCC_199 MQGTATPASATGNAGGQLSGAGQQQGAGQGQQGMDPSQMLSGMTGALTGA
MSMEG_4400|M.smegmatis_MC2_155 EFSGKSAALQAG-------------------LRTLDVSGVAVFAGSVAPD
. *
Mb3469c|M.bovis_AF2122/97 ANRIVDAVDSLLGSVAEQLG----DPLAADNPPG----AVDPF-AEDAAD
Rv3439c|M.tuberculosis_H37Rv ANRIVDAVDSLLGSVAEQLG----DPLAADNPPG----AVDPF-AEDAAD
MAV_4382|M.avium_104 AGKIVDAMGGLLGSVGDGLDGS--DPFGDQDPLDDNAFHGDPFHADDPAD
MMAR_1110|M.marinum_M AGRIVDALAELLGTAAVPIA----DPLGSVDPAD----GGDRS-GADAVD
MUL_0868|M.ulcerans_Agy99 AGRIVDALAELLGTAAVPIA----DPLGSVDPAD----GGDRS-GADAVD
Mflv_4945|M.gilvum_PYR-GCK GQHFADALSGLLGGGLGGDALE--SPDLDLEEPA----------LDEP-G
Mvan_1474|M.vanbaalenii_PYR-1 GQQFADTLSGLLGG-AGIGEPE--LP--ELDEPP----------LDEPED
TH_3514|M.thermoresistible__bu EDAGTEERDGASDADTDAEDDDRGDDTPEDDTPDDGDPDAGGSPGEDPQE
MAB_3746c|M.abscessus_ATCC_199 LSSIGQAASGIVSAITEGISSIPFDQMGQGLGDDQ--FDGRADEAADKKD
MSMEG_4400|M.smegmatis_MC2_155 GDIAVDPEAVVRRHLTLVGVHN-----------------------YEPRH
: :
Mb3469c|M.bovis_AF2122/97 NADDGDDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAE--
Rv3439c|M.tuberculosis_H37Rv NADDGDDAHPEEADEAAEPKEATEPDEADEVDDADESVPAERAQDVAE--
MAV_4382|M.avium_104 AKDAGDDADETAADEPGAPD---RPAPAGEAEPSGEPAPSGEAAPTGE--
MMAR_1110|M.marinum_M DVGDENPSEPRKPDAATETGASDEKSDNGEAPEAADGSPPGAPAGDGA--
MUL_0868|M.ulcerans_Agy99 DVGDENPSESRKPDAATETGASDEKSDDGEAPEAADGSPPGAPAGDGA--
Mflv_4945|M.gilvum_PYR-GCK VEEPE-LEEENEEDAELEEDDEAEEK--PESVVAADPVLP-EEPCDPP--
Mvan_1474|M.vanbaalenii_PYR-1 LDEPDDPEEQDREEDAVAEDAVADEEGVVDGEDVTDVAAPDEEQCDAV--
TH_3514|M.thermoresistible__bu APDPEHDPDPAPGEPETHXXXAGPGDVAIDFSGSTEALGEALDRLDVG--
MAB_3746c|M.abscessus_ATCC_199 EAAADGKKDPDAKMAAAKDAAIEEARADSGATFATDGKPAPGIQLAGAGG
MSMEG_4400|M.smegmatis_MC2_155 LLQALNFLQRTKDRFPWADLVADPVPLDRIAGLLLDAPGPKPRYAVAP--
. :
Mb3469c|M.bovis_AF2122/97 -EATLPPVAEPPPPAAPP--------------------------------
Rv3439c|M.tuberculosis_H37Rv -EATLPPVAEPPPPAAPP--------------------------------
MAV_4382|M.avium_104 -PAQP---VEATPPAAPP--------------------------------
MMAR_1110|M.marinum_M -ERSAMPIGEQARTPVPE--------------------------------
MUL_0868|M.ulcerans_Agy99 -ERSAMPIGEQARTPVPE--------------------------------
Mflv_4945|M.gilvum_PYR-GCK -PEPAATVAAPEPPAPPP--------------------------------
Mvan_1474|M.vanbaalenii_PYR-1 -AEAVEPVAAPTPVPAPP--------------------------------
TH_3514|M.thermoresistible__bu -GVLVLAGSVSPAPALPVDPELIVRRWLTLTGVHNYEPQHLRDAVAFLRH
MAB_3746c|M.abscessus_ATCC_199 LEATPTAAPGQTTPGAPLGATPTGTIPPAAGGLSAAQPAGSSASLTPHPV
MSMEG_4400|M.smegmatis_MC2_155 --------------------------------------------------
Mb3469c|M.bovis_AF2122/97 -------VAEPPPPVAAPAPPGAPE------PANGPSPEALSEGATPCEI
Rv3439c|M.tuberculosis_H37Rv -------VAEPPPPVAAPAPPGAPE------PANGPSPEALSEGATPCEI
MAV_4382|M.avium_104 -------PAAPPP-GAPPADPGPAP------AAAQPTPEP---GSTPCQI
MMAR_1110|M.marinum_M -------GAATPVAQPPRVPEAPPH------DGSAPAGEA----SSPCEI
MUL_0868|M.ulcerans_Agy99 -------GAATPVAQPPRVPEAPPH------DGSAPAGEA----SSPCEI
Mflv_4945|M.gilvum_PYR-GCK -------PAEPVP------AAEPAS------DEQ-----------TPCEI
Mvan_1474|M.vanbaalenii_PYR-1 -------PAEPLPPAEAPPPAEPVA------GAQ-----------TPCEI
TH_3514|M.thermoresistible__bu SRDRFDWPALVDDPVGLDDIAAALM------PAPTGRLRKAVSPGLPPRT
MAB_3746c|M.abscessus_ATCC_199 QAQPPTVPQHPEPQSAAARQPSPLPSVGPTDASAQPQEAKTEAGETPCEI
MSMEG_4400|M.smegmatis_MC2_155 --------------------------------------------------
Mb3469c|M.bovis_AF2122/97 AADELPQAGP---
Rv3439c|M.tuberculosis_H37Rv AADELPQAGP---
MAV_4382|M.avium_104 AADQLPQAGQ---
MMAR_1110|M.marinum_M AADELPKAGP---
MUL_0868|M.ulcerans_Agy99 AADELPKAGP---
Mflv_4945|M.gilvum_PYR-GCK AAGEVPQVGESAG
Mvan_1474|M.vanbaalenii_PYR-1 AADEVPQVGEPAE
TH_3514|M.thermoresistible__bu AARNSPGSRPPDS
MAB_3746c|M.abscessus_ATCC_199 AADELPKAGR---
MSMEG_4400|M.smegmatis_MC2_155 -------------