For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MFERLRRSGRIVAALVLVASLAACSKGSPAAEQSLQSATEGTLTWYTDDDAQEVDPVVRAFTEKTGIEVT LLATEFVAQRLMSESASNVATADVISFAGAPSVLELEDAGYLAKLPASVSEALPRQDPVFVSKSGNWFSN QASSWGVFYNTDLVDPAFRPTDFTSFLNPYWRGKFSVPISTNDSSIEGYYQIAQEPSLGKEFLTALGDND PVISGSSGQGVSDVIVGNQIGGITNDNAVWQQIAKGAPLAFAYPPGGTTFSQKYNALVANAAHPKAAEEF LEFLVTKDAATLLSASTGKLSTFPGIPSTPPGRPTISDGKFFPLPDPQALVDAQPTMAPFLKEALNE
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_6021 | - | - | 100% (347) | extracellular solute-binding protein |
| M. vanbaalenii PYR-1 | Mvan_3093 | - | 9e-13 | 24.36% (353) | extracellular solute-binding protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_3363 | - | 9e-12 | 23.46% (358) | extracellular solute-binding protein |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_3636 | - | 1e-10 | 24.01% (354) | ferric iron-binding periplasmic protein of ABC transporter |
| M. thermoresistible (build 8) | TH_0285 | - | 1e-12 | 24.38% (320) | ferric iron-binding periplasmic protein of ABC transporter |
| M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3363|M.gilvum_PYR-GCK -------------------MSKS-FTRLAGVFG--AVAAVLAFSACGS-Q
MSMEG_3636|M.smegmatis_MC2_155 ----------------MSLMSKVNSVRSVAVVATVAAAAALTLGACGSGS
TH_0285|M.thermoresistible__bu VRTIFNRAGFNRRGFNRRGFNRRGFNRIAVLLT--AAATALALGACGSAP
Mvan_6021|M.vanbaalenii_PYR-1 ---------------MFERLRRSGRIVAALVLVASLAACSKGSPAAEQSL
: : . :. .* *. .
Mflv_3363|M.gilvum_PYR-GCK PAGED--------ADKIVVYSGRSEELVKPLIEQFTTDTGIQVETRYAGS
MSMEG_3636|M.smegmatis_MC2_155 DEADS--------ADKIVVYSGRSENLVAPLIEKFTSDTGIEVETRYAGS
TH_0285|M.thermoresistible__bu ESDTDGQTTAEAAGEKLVVYSGRNEQLVAPLIERFSTDTGIEVDVRYAGS
Mvan_6021|M.vanbaalenii_PYR-1 QSATEG---------TLTWYTDDDAQEVDPVVRAFTEKTGIEVTLLATEF
. .:. *:. . : * *::. *: .***:* :
Mflv_3363|M.gilvum_PYR-GCK GELAAQLLTEGDKSPADVFLSQDAGALGAVSKAGLFAPINADALAAVPKQ
MSMEG_3636|M.smegmatis_MC2_155 GELAAQLITEGDKSPADVFLSQDAGALGAVSEAGLFAPINDEAMAAVPAN
TH_0285|M.thermoresistible__bu GELAAQLITEGDRSPADVFLSQDAGALGAVTEAGLFTPIDPETLAKVPAH
Mvan_6021|M.vanbaalenii_PYR-1 VAQRLMSESASNVATADVISFAGAPSVLELEDAGYLAKLPASVSEALPRQ
: .: :.***: .* :: : .** :: : .. :* :
Mflv_3363|M.gilvum_PYR-GCK ---YSAADGTWLGVSGRARVIVYNPTLVP--DPPDTIDGLLAPEWKG-KI
MSMEG_3636|M.smegmatis_MC2_155 ---FSAADKSWLGVSGRARVLVYNPDIAP--NPPDTIDGLLAPEWKG-KI
TH_0285|M.thermoresistible__bu ---FSAADGTWLGVSGRARVVVYNPDLAP--EPPDTIDGLLDPQWAGGKI
Mvan_6021|M.vanbaalenii_PYR-1 DPVFVSKSGNWFSNQASSWGVFYNTDLVDPAFRPTDFTSFLNPYWRG---
: : . .*:. .. : :.**. :. * : .:* * * *
Mflv_3363|M.gilvum_PYR-GCK GFAPSNASWQAFVTGLRVIRGD-DGAEQWLRAFKAQDPQAFENNVAIRDA
MSMEG_3636|M.smegmatis_MC2_155 GFAPSNASWQSFVTGLRVIRGD-DGARQWLEAFKAQDPQPYENNVAVRDA
TH_0285|M.thermoresistible__bu GFAPSNASWQSFVTGLRVLRGE-DGARQWLEAFKAQEPQAYENNVAVRDA
Mvan_6021|M.vanbaalenii_PYR-1 KFSVPISTNDSSIEGYYQIAQEPSLGKEFLTALGDNDPVISGSSGQGVSD
*: . :: :: : * : : . ..::* *: ::* .. .
Mflv_3363|M.gilvum_PYR-GCK VDAGQIPLGIANHYYLYELINAKGADAVTARNQFMAPGDPGGLVNVAGVG
MSMEG_3636|M.smegmatis_MC2_155 VDAGQIPLGVVNHYYLYELVDAKGEQAVKARNKFMAPGDPGGLINVAGVG
TH_0285|M.thermoresistible__bu VDAGQIPLGLVNHYYLYELIKAKGADAVVAENQYMAPGDPGGLINVAGVG
Mvan_6021|M.vanbaalenii_PYR-1 VIVGNQIGGITNDNAVWQQIAKGAPLAFAYP-----PG--GTTFSQKYNA
* .*: *:.*. ::: : . *. ** * .. .
Mflv_3363|M.gilvum_PYR-GCK VLKSAPNPEGAQAFASYLIGETAQKYFAEETAEYPLVAGVATSSE-MPPL
MSMEG_3636|M.smegmatis_MC2_155 VLKSAANPEGAQAFASYLIGKSAQEYFAGETKEYPLIEGVEPSGE-MPQL
TH_0285|M.thermoresistible__bu VLKTASNPEAAQRFAAYLVEKDAQEYFAEETSEYPLIDGVPAGPE-MPPL
Mvan_6021|M.vanbaalenii_PYR-1 LVANAAHPKAAEEFLEFLVTKDAATLLSASTGKLSTFPGIPSTPPGRPTI
:: .*.:*:.*: * :*: : * :: .* : . . *: . * :
Mflv_3363|M.gilvum_PYR-GCK ADLRP-PAVDLSQLDDIETTQEMLVETGLLTN
MSMEG_3636|M.smegmatis_MC2_155 SELQP-PAVDLSQLSDLEATQELLVETGLLTN
TH_0285|M.thermoresistible__bu ADLQP-PEVDLSQLSDLEATQELLVETGLLTN
Mvan_6021|M.vanbaalenii_PYR-1 SDGKFFPLPDPQALVDAQPTMAPFLKEALNE-
:: : * * . * * :.* ::: .*