For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
NAVTVLLAYAVALSWFAPALLTASASAGAHPRLAVAGWIAAVGSALSAWAGAVVILVVGAVHAVVTRSAL TFCVETLGLTSAVHLPSSTATALVVVLLIATSAVALYTVRRVVMALIRGRRRNVEHAEAVSIVGRPTEHP GVVEISARQPTAYCVSGGGRSVIVMTTAVRDLLDEDGMAAVLAHERAHLRGRHHHVIAVLNALAAALPRL PLMRRAAREVAALLEMCADDAASREHGRTHLLNSLALLSTGDRLPEGALAAAGTAVLDRLLRLAQPPATS WWRPHVAVFAVMAACGVPIAALSLCVY*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_5555 | - | - | 100% (308) | peptidase M56, BlaR1 |
M. vanbaalenii PYR-1 | Mvan_3654 | - | 6e-52 | 40.00% (310) | hypothetical protein Mvan_3654 |
M. vanbaalenii PYR-1 | Mvan_3707 | - | 6e-47 | 41.48% (311) | peptidase M48, Ste24p |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1876c | - | 3e-25 | 32.70% (315) | hypothetical protein Mb1876c |
M. gilvum PYR-GCK | Mflv_0897 | - | 8e-54 | 42.57% (296) | hypothetical protein Mflv_0897 |
M. tuberculosis H37Rv | Rv1845c | - | 3e-25 | 32.70% (315) | hypothetical protein Rv1845c |
M. leprae Br4923 | MLBr_02064 | - | 3e-24 | 31.80% (283) | integral membrane protein |
M. abscessus ATCC 19977 | MAB_4859 | - | 2e-45 | 38.59% (311) | hypothetical protein MAB_4859 |
M. marinum M | MMAR_5059 | - | 9e-62 | 43.14% (306) | peptidase M48 like- protein |
M. avium 104 | MAV_2870 | - | 1e-25 | 32.91% (313) | integral membrane protein |
M. smegmatis MC2 155 | MSMEG_3631 | - | 1e-25 | 31.15% (305) | integral membrane protein |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_4135 | - | 3e-61 | 44.63% (307) | peptidase M48 like- protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb1876c|M.bovis_AF2122/97 -MSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSS Rv1845c|M.tuberculosis_H37Rv -MSALAFTILAVLLAGPTPALLARATWPLRAPRAAMVLWQAIALAAVLSS MLBr_02064|M.leprae_Br4923 -MSALAFTILAVLLVGPTPTLVARSTWPLRAPRAAMVLWQTIALAAALST MAV_2870|M.avium_104 -MSALAFTILAVLLTGPVPAMLARARWPLRAPRAAMVLWQAVALAAVLSA MSMEG_3631|M.smegmatis_MC2_155 -MSALAFTLVALALVGPVPAMLARASWPLRAPRAAIVLWQSIALAAVLSA MMAR_5059|M.marinum_M MNAALLLFAYASALIWVGPVLLRRVTGTGVHPRLAVASWLSAVFAAIAAW MUL_4135|M.ulcerans_Agy99 MNAALLLFAYASALIWVGPVLLRRVTGTGVHPRLAVASWLSAVFAAIAAW Mvan_5555|M.vanbaalenii_PYR-1 MNAVTVLLAYAVALSWFAPALLTASASAGAHPRLAVAGWIAAVGSALSAW Mflv_0897|M.gilvum_PYR-GCK MTTALWLVLYGAVLAWFAPPVLRRLTGGGVSPSMGVAAWLATVAAVLVAW MAB_4859|M.abscessus_ATCC_1997 MSIAVCLLLYSVAVLIFGPRLLRRLTRTGYAPRLAITAWLAAIVSVLGTW . : . : * :: * .:. * : :. : Mb1876c|M.bovis_AF2122/97 FSAGIAIASRLLMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVG Rv1845c|M.tuberculosis_H37Rv FSAGIAIASRLLMPGPDGRPTTSFVGAAGRLGWPLWAAYITVFALTVLVG MLBr_02064|M.leprae_Br4923 FSAGIAIASRVLMPGPDGRLTASVIGAAGRLGWPLWAAYVAAFALTVLVG MAV_2870|M.avium_104 FSAGIAIATRVLVPGPDGRPTTSILGAEGRLGWPLWTAYIGVFALTVLVG MSMEG_3631|M.smegmatis_MC2_155 FSAGIAIASRLFVPGADGRPTATITSEIDVLGWPLWLLYVVVFSLTLFIG MMAR_5059|M.marinum_M VGALVFLGAAVLDSIWR-HRALALCLKELG--LAGELGLPRGIASALAVG MUL_4135|M.ulcerans_Agy99 VGALVSLGAAVLDSIWR-HRALALCVKELG--LAGELGLPRGIASALAVG Mvan_5555|M.vanbaalenii_PYR-1 AGAVVILVVGAVHAVVT-RSALTFCVETLG--LTSAVHLPSSTATALVVV Mflv_0897|M.gilvum_PYR-GCK L-AAVVLVVDATSSSVLNGSVVTLCLELFG--FSDHTPLAGRLG---SIA MAB_4859|M.abscessus_ATCC_1997 ISAAALIVIDVVRHWNSPAVVLAACAARLHAMLIGQAGAAAQVG---LLA * : . : . : Mb1876c|M.bovis_AF2122/97 ARLAVAVVRVATATRRRRAHHRMVVDLVGVGHNGALAQPCARARDLRVLD Rv1845c|M.tuberculosis_H37Rv ARLAVAVVRVATATRRRRAHHRMVVDLVGVGHNGALAQPCARARDLRVLD MLBr_02064|M.leprae_Br4923 ARLIVAIVRVAIATRRRRAHHRMVVDLVGVGHNAALAQPCARARDLRVLE MAV_2870|M.avium_104 ARLMVAVVRVAIANRRRRAHHRMVVDLVGMGHGAALSQPCSRTRDLRVLD MSMEG_3631|M.smegmatis_MC2_155 ARLCVAIVQVGVATRRRRAHHRMMVDLLSKSRDAVPAHLRTPASGLRILD MMAR_5059|M.marinum_M VLSTGAVATVIACWRMGRQLRRQRSASRLHAATARTIGGASDWPGVVVVP MUL_4135|M.ulcerans_Agy99 VLSTGAVATVIVCWRMGRQLRGQRSASRLHAATARTIGGVSDWPGVVVVP Mvan_5555|M.vanbaalenii_PYR-1 LLIATSAVALYTVRRVVMALIRGRRRNVEHAEAVSIVGRPTEHPGVVEIS Mflv_0897|M.gilvum_PYR-GCK LIGGGLLTSAVVALRLGRCLARLRTRSHEHAHAARIVGRPTDHPHVVVVE MAB_4859|M.abscessus_ATCC_1997 LSAAGSIAAPALGVRLARTLIRLRDTAHEHAYAVHMVGRRTAEGDVMVLE . * . : : : Mb1876c|M.bovis_AF2122/97 VAQPLAYCLPGVR-SRVVVSEGTLTALADAEVAAILTHERAHLRARHDLV Rv1845c|M.tuberculosis_H37Rv VAQPLAYCLPGVR-SRVVVSEGTLTALADAEVAAILTHERAHLRARHDLV MLBr_02064|M.leprae_Br4923 VAQPLAYCLPGVR-SRVVVSEGALTKLNDTEVTAILTHERAHLRARHDLV MAV_2870|M.avium_104 VPQPLAYCLPGVR-SRVVVSEGTLSTLADAEVSAILTHERAHLRARHDLV MSMEG_3631|M.smegmatis_MC2_155 VAQPLAYCLPGVR-SRVVVSEGTLDTLSPDEVDAILTHERAHLRARHDLV MMAR_5059|M.marinum_M APQPAAYCVTGRPNSVIVVTSGALGRLDEPQLAAVLAHEYAHLASRHHDL MUL_4135|M.ulcerans_Agy99 APQPAAYCVTGRPNSVIVVTSGALGRLDEPQLAAVLAHEYAHLASRHHDL Mvan_5555|M.vanbaalenii_PYR-1 ARQPTAYCVSGGGRSVIVMTTAVRDLLDEDGMAAVLAHERAHLRGRHHHV Mflv_0897|M.gilvum_PYR-GCK ADLPAAYCVIGRP-HAIVVTSAAVRSLDRAQLKAVLAHEHAHLSGHHHHI MAB_4859|M.abscessus_ATCC_1997 APEAAAYCVAGRP-SAIVLTTGALAVLDDAQVAAILAHERAHLAGHHPQL . . ***: * :*:: .. * : *:*:** *** .:* : Mb1876c|M.bovis_AF2122/97 LEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPLARALV Rv1845c|M.tuberculosis_H37Rv LEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRTPLARALV MLBr_02064|M.leprae_Br4923 LEAFTAVHAAFPRLVRSSAALSAVRLLVELLADDAAVRAAGRTPLARALV MAV_2870|M.avium_104 LEAFTAVHAAFPRLVRSANALGAVQLLVELLADDAAVRAAGRAPLARALV MSMEG_3631|M.smegmatis_MC2_155 LEMFTAVHAAFPRFVRSASALDAVRLLIELLADDAAVRIAGPTPLARALV MMAR_5059|M.marinum_M LMALRALASSLPRLPLFAAAAKVVADLLEMCADDVAVRSHGKMALLRGLL MUL_4135|M.ulcerans_Agy99 LMALRALASSLPRLPLFAAAAKVVADLLEMCADDVAVRSHGKMALLRGLL Mvan_5555|M.vanbaalenii_PYR-1 IAVLNALAAALPRLPLMRRAAREVAALLEMCADDAASREHGRTHLLNSLA Mflv_0897|M.gilvum_PYR-GCK LMVLRALAATLPHLPLFAGAHQAVAELLEMCADDTAARRVGTRPLLTGLL MAB_4859|M.abscessus_ATCC_1997 VSVLRALADVFPRVRLMTDGSAQISRLLEMCADDSAARHHGRGVLLSGLM : : *: :*:. . : *:*: *** * * * * .* Mb1876c|M.bovis_AF2122/97 ACASG-RAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVV Rv1845c|M.tuberculosis_H37Rv ACASG-RAPSGALAVGGPSTVLRVRRLSGRGNSAVLSAAAYLAAAAVLVV MLBr_02064|M.leprae_Br4923 ACASG-QAPSGALAAGGNTTVLRVRRLSGRSNSAVVSAAAYLAAAIVLLV MAV_2870|M.avium_104 ACASG-RAPSGALAAGGPSTVVRVRRLGGRGNSPLLSAAAYLAAAAVFVV MSMEG_3631|M.smegmatis_MC2_155 TCAAG-RTPSGALAAGGPTTVIRVRRLGGKPNSLTLSVIAYLAAVAILVV MMAR_5059|M.marinum_M ALTEGPAMAPAALGAANTATVARAERLAISVSRRSWWQERLMLWATIGLA MUL_4135|M.ulcerans_Agy99 ALTEGPAMAPVALGAANTATVARAERLAISVSRRSWWQERLMLWATSGLA Mvan_5555|M.vanbaalenii_PYR-1 LLSTGDRLPEGALAAAGTAVLDRLLRLAQPPAT-SWWRPHVAVFAVMAAC Mflv_0897|M.gilvum_PYR-GCK ALAGHRPPVAEGLAAAATAVITRAERLVTPTRRHVRWRHRALLSVAIATM MAB_4859|M.abscessus_ATCC_1997 DLAGTVPAAAVG--AANVAVLDRAERLLTPPEPPARAWARIALTMCVAAI : . .. :.: * ** Mb1876c|M.bovis_AF2122/97 PTVALAVPWLTQLQRLFIA-- Rv1845c|M.tuberculosis_H37Rv PTVALAVPWLTQLQRLFIA-- MLBr_02064|M.leprae_Br4923 PTVALAVPWLTELQRLFNI-- MAV_2870|M.avium_104 PTVALAVPWLTELERLLNL-- MSMEG_3631|M.smegmatis_MC2_155 PTVAVAVPWLTELHRLFSGLT MMAR_5059|M.marinum_M VVSPMILGLACRL-------- MUL_4135|M.ulcerans_Agy99 VVSSMFLGLACRL-------- Mvan_5555|M.vanbaalenii_PYR-1 GVPIAALSLCVY--------- Mflv_0897|M.gilvum_PYR-GCK LATPAFIQVLCHH-------- MAB_4859|M.abscessus_ATCC_1997 SAGPLVTIALATSGALLCSP- .