For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TSVVLSIGSNLGDRMAHLQSVLDGLAGSALAVSPVYETDAWGGVEQGPFLNAVVLAEDRELDGYGWLRRA HELEDAAGRVRDQRWGPRTLDVDLVQCHGPDGEVVVHDDVLTLPHPYAHARAFVLVPWLQVEPTATLTVD GRTDPLTAHLAAVDAAERAGVRTTDFVLRIADGA*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_5368 | - | - | 100% (175) | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3636c | folK | 4e-51 | 57.74% (168) | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridi ne |
M. gilvum PYR-GCK | Mflv_1420 | - | 2e-65 | 71.18% (170) | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine |
M. tuberculosis H37Rv | Rv3606c | folK | 4e-51 | 57.74% (168) | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridi ne |
M. leprae Br4923 | MLBr_00226 | folK | 2e-49 | 56.50% (177) | putative 2-amino-4-hydroxy-6-hydroxymethyldihydropterine |
M. abscessus ATCC 19977 | MAB_0537 | - | 4e-49 | 59.04% (166) | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine |
M. marinum M | MMAR_5109 | folK | 2e-51 | 57.80% (173) | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine |
M. avium 104 | MAV_0546 | folK | 8e-58 | 63.31% (169) | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine |
M. smegmatis MC2 155 | MSMEG_6101 | folK | 4e-61 | 66.08% (171) | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine |
M. thermoresistible (build 8) | TH_0987 | folK | 2e-59 | 65.48% (168) | 2-AMINO-4-HYDROXY-6-HYDROXYMETHYLDIHYDROPTERIDI NE |
M. ulcerans Agy99 | MUL_4188 | folK | 5e-51 | 57.80% (173) | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_5368|M.vanbaalenii_PYR-1 MTSVVLSIGSNLGDRMAHLQSVLDGLAGSALAVSPVYETDAWGGVEQGPF Mflv_1420|M.gilvum_PYR-GCK MTSVVLSIGSNLGDRLAHLQSVLDALGPAVTGVSPVYETDAWGGVEQGPF MAB_0537|M.abscessus_ATCC_1997 -MRAVLSIGSNVGDRLAHLQSVVDALGSDVVGVSPVYQTAPWGHVPQPDF TH_0987|M.thermoresistible__bu ---VVLSIGSNLGDRLAHLQSVVDALGAAVSAVSPVYETEAWGGVEQGRF Mb3636c|M.bovis_AF2122/97 MTRVVLSVGSNLGDRLARLRSVADGLGDALIAASPIYEADPWGGVEQGQF Rv3606c|M.tuberculosis_H37Rv MTRVVLSVGSNLGDRLARLRSVADGLGDALIAASPIYEADPWGGVEQGQF MMAR_5109|M.marinum_M MSSVVLSVGSNLGDRLANLRSVVDGLGDTLVGASRVYETDPWGGVAQEPF MUL_4188|M.ulcerans_Agy99 MSSVVLSVGSNLGDRLANLRSVVDGLGDTLVGASRVYETDPWGGVAQEPF MAV_0546|M.avium_104 MTRVVLSIGSNLGDRLARLQSVVDGLGGAVRAISPVYETQPWGRVDQAPF MLBr_00226|M.leprae_Br4923 MTRVVLSIGSNLGDRLAWLQSAVDGLGDAVVAVSPVYDTVPWGAVEQRSF MSMEG_6101|M.smegmatis_MC2_155 MTSTVLSIGSNLGDRLTRLQSVLDGLGPAVRAVSAVYETAAWGFEEQGPF .***:***:***:: *:*. *.*. . * :*:: .** * * Mvan_5368|M.vanbaalenii_PYR-1 LNAVVLAEDRELDGYGWLRRAHELEDAAGRVRDQRWGPRTLDVDLVQCHG Mflv_1420|M.gilvum_PYR-GCK LNAIVLAEDPALDAHGWLRRAHELEDACGRTREQHWGPRTLDVDLVSCRD MAB_0537|M.abscessus_ATCC_1997 FNAIVVAD--GREPLEWLAVAHRLEQSAQRLRDERWGPRTLDVDVISCRR TH_0987|M.thermoresistible__bu LNATLIAETPALDCHGWLDTAQQLERAADRVRERRWGPRTLDVDLITCHD Mb3636c|M.bovis_AF2122/97 LNAVLIADDPTCEPREWLRRAQEFERAAGRVRGQRWGPRNLDVDLIACYQ Rv3606c|M.tuberculosis_H37Rv LNAVLIADDPTCEPREWLRRAQEFERAAGRVRGQRWGPRNLDVDLIACYQ MMAR_5109|M.marinum_M LNVVLIADDPARDGHAWLHQAQEFERAAGRQRLQRWGPRTLDVDLVACYQ MUL_4188|M.ulcerans_Agy99 LNVVLIADDPARDGHAWLHQAQEYERAAGRQRLQRWGPRTLDVDLVACYQ MAV_0546|M.avium_104 LNAVLIADDPACDGQGWLRRAQEFERAAGRVRGERWGPRTLDVDLIACYG MLBr_00226|M.leprae_Br4923 LNAVVIADGPAYDTKAWLCRAQELERNAGRVRGQRWGARTLDVDLISCYQ MSMEG_6101|M.smegmatis_MC2_155 LNAVLLADDPDLDGHGWLRRAQELEAAAGRVRGQRWGPRTLDVDLITCHD :*. ::*: : ** *:. * . * * .:**.*.****:: * Mvan_5368|M.vanbaalenii_PYR-1 -----PDG-EVVVHDDVLTLPHPYAHARAFVLVPWLQVEPTATLTVDGRT Mflv_1420|M.gilvum_PYR-GCK -----GDA-EIVMDDPDLTLPHPYAHVRAFVLVPWSAVDASAASAVS--- MAB_0537|M.abscessus_ATCC_1997 -----HDAGEVLSDDPDLTLPHPRAHLRAFVLVPWLALEPGAVLTVDGVV TH_0987|M.thermoresistible__bu -----GDR-EVRMDDERLILPHPYAHQRAFVLVPWLAIDPGAVLTVAGTP Mb3636c|M.bovis_AF2122/97 -TSATEALVEVTARENHLTLPHPLAHLRAFVLIPWIAVDPTAQLTVAGCP Rv3606c|M.tuberculosis_H37Rv -TSATEALVEVTARENHLTLPHPLAHLRAFVLIPWIAVDPTAQLTVAGCP MMAR_5109|M.marinum_M -AGP-AGRTEVRCNDSILTLPHPLAHQRAFVMVPWLDVDPAAELTAPEGP MUL_4188|M.ulcerans_Agy99 -AGP-AGRTEVRCNDSILTLPHPLAHQRAFVMVPWLDVDPAAELTGPEGP MAV_0546|M.avium_104 -DGE------VISRENNLTLPHPLAHLRAFVLIPWLAVDPDARLTVADGP MLBr_00226|M.leprae_Br4923 TSGATTGAVEVITCESNLTLPHPRAHLRAFVLVPWLAVDSDAELTVAGRA MSMEG_6101|M.smegmatis_MC2_155 ------GADEIISRDEGLTLPHPLAHLRAFVLIPWLDVDPDATLTVAGES : : * **** ** ****::** ::. * : Mvan_5368|M.vanbaalenii_PYR-1 DPLTAHLAAVDAAERAGVRTTDFVLRIADGA---------- Mflv_1420|M.gilvum_PYR-GCK ----AHLAALDPAERAGVRLTDLVLRPRSAG---------- MAB_0537|M.abscessus_ATCC_1997 RPVADLLSGLDAAEREGVRRMDAALTG-PVT---------- TH_0987|M.thermoresistible__bu RPVAGLLAGLDPAERAGVHRTDLTLRIDPRRGA-------- Mb3636c|M.bovis_AF2122/97 RPVTRLLAELEPADRDSVRLFRPSFDLNSRHPVSRAPES-- Rv3606c|M.tuberculosis_H37Rv RPVTRLLAELEPADRDSVRLFRPSFDLNSRHPVSRAPES-- MMAR_5109|M.marinum_M RPVAALLAGLPPADRASVRLT--SLTVAA------------ MUL_4188|M.ulcerans_Agy99 RPVAALLAGLPPADRASVRLT--SLTVAA------------ MAV_0546|M.avium_104 QPVARLLAQLDQADRDGVRPTGLTLTPPAGSSADSGAGS-- MLBr_00226|M.leprae_Br4923 QRVDRLLAEMEPTEREGVRLTNLTLKLKRSSPARPVSPKSD MSMEG_6101|M.smegmatis_MC2_155 RPVQRLLSEIDQSERDGVTRTDLVLDIRTETAAG------- *: : ::* .* :