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M. vanbaalenii PYR-1 Mvan_5320 (-)

annotation: periplasmic solute binding protein
coordinates: 5697841 - 5698872
length: 343

ISSFRGVRVLAATLAVSLPFVLSACGGDDTSAMDTSAAPDCPTTPVNVVVSVDQWGNIVSQLGGACAEVT
TVLAGSAVDPHDYEPAPSDAADFEGAQLVVLNGGHYDEWAAKLAATSAADAPVVNAVELSGGHAEQGQEH
AGEDGHGHAEEGQEHAGEQGQELGDEGNPHVWYNPTAVTEFAEAVTAQLGKLSPDAAGYFAERHAEFAES
MKPYDEVIAAIKAGATGRTYAATESVFGDMATALGLVDRTPQGYQVAAANESDPSPADLDAFLQLLADRG
VDVLIYNTQTEGSVPEQIRSAAEQAGIAVVDVTETLPSDAKSFQDWQVAQLDSLAKALDVRT*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. vanbaalenii PYR-1Mvan_5320--100% (343)periplasmic solute binding protein
M. vanbaalenii PYR-1Mvan_5324-2e-0525.36% (276) periplasmic solute binding protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2085-3e-3231.20% (266) hypothetical protein Mb2085
M. gilvum PYR-GCKMflv_1454-1e-12868.02% (344) periplasmic solute binding protein
M. tuberculosis H37RvRv2059-3e-3231.20% (266) hypothetical protein Rv2059
M. leprae Br4923MLBr_00337-6e-3331.29% (294) putative periplasmic solute-binding proteins
M. abscessus ATCC 19977MAB_0577c-1e-3430.40% (329) ABC transporter solute-binding protein
M. marinum MMMAR_5071-2e-3330.28% (317) hypothetical protein MMAR_5071
M. avium 104MAV_0583-3e-3633.23% (334) periplasmic solute binding protein family protein
M. smegmatis MC2 155MSMEG_6047-1e-12064.39% (337) cation ABC transporter, periplasmic cation-binding protein,
M. thermoresistible (build 8)TH_1746-4e-3832.92% (322) CONSERVED HYPOTHETICAL PROTEIN
M. ulcerans Agy99MUL_4147-8e-3430.28% (317) hypothetical protein MUL_4147

CLUSTAL 2.0.9 multiple sequence alignment


Mb2085|M.bovis_AF2122/97            --------MATPVILVTGHEGTAAVTADLLGLLT--DHGTATLRSVAPG-
Rv2059|M.tuberculosis_H37Rv         --------MATPVILVTGHEGTAAVTADLLGLLT--DHGTATLRSVAPG-
MMAR_5071|M.marinum_M               ------------MLRVRVAHGFSAILLSVLGATG--VAACGTDHDAHPG-
MUL_4147|M.ulcerans_Agy99           -------------MRVRVAHGFSAILLSVLGATG--VAACGTDHDAHPG-
MLBr_00337|M.leprae_Br4923          ------------------MRWLTTIILCLISSTV--AGGCGSLSSGHLR-
MAV_0583|M.avium_104                --------MGTALTRDATRVGRTTRWLATVLAVTGWAALTGCTGPAHPH-
TH_1746|M.thermoresistible__bu      -----------------------------VSAVAFGSAACGQDRDVHQEH
MAB_0577c|M.abscessus_ATCC_199      -----------------MPARVAGLAVAVATAGTLALSGCG-QSHERSG-
Mvan_5320|M.vanbaalenii_PYR-1       --------MISSFRGVRVLAATLAVSLPFVLSACGGD-DTSAMDTSAAPD
Mflv_1454|M.gilvum_PYR-GCK          MKTVIVCAMLRSTRRGRALAG-IAASAALVLTACGGSGNTGAGDEASAGD
MSMEG_6047|M.smegmatis_MC2_155      ---------------MRTLAVSVALAAPFALAACGSD---ESSTAEPAGD
                                                                                      

Mb2085|M.bovis_AF2122/97            -SVRRADPRPRCHRREQRRRHRASMKSAIHPDHHPRRLPRCPVLRRDQVV
Rv2059|M.tuberculosis_H37Rv         -SVRRADPRPRCHRREQRRRHRASMKSAIHPDHHPRRLPRCPVLRRDQVV
MMAR_5071|M.marinum_M               -AAAVVAST-----------------------------------------
MUL_4147|M.ulcerans_Agy99           -AAAVVAST-----------------------------------------
MLBr_00337|M.leprae_Br4923          -PTAVVAST-----------------------------------------
MAV_0583|M.avium_104                -ATAVVAST-----------------------------------------
TH_1746|M.thermoresistible__bu      RAATVVAST-----------------------------------------
MAB_0577c|M.abscessus_ATCC_199      -ALTVVAST-----------------------------------------
Mvan_5320|M.vanbaalenii_PYR-1       CPTTPVNVVVS---------------------------------------
Mflv_1454|M.gilvum_PYR-GCK          CPAAPVDVVVS---------------------------------------
MSMEG_6047|M.smegmatis_MC2_155      CPTTPVNVVVS---------------------------------------
                                     .   .                                            

Mb2085|M.bovis_AF2122/97            LEMIVITMVGRPSGPGERKWDVWGSVARAVTGGHVPVKSILTGAHADPHS
Rv2059|M.tuberculosis_H37Rv         LEMIVITMVGRPSGPGERKWDVWGSVARAVTGGHVPVKSILTGAHADPHS
MMAR_5071|M.marinum_M               --------------------DVWGSVARAVAGGHLAVKSILTGAASDPHS
MUL_4147|M.ulcerans_Agy99           --------------------DVWGSVARAVAGGHLAVKSILTGAASDPHS
MLBr_00337|M.leprae_Br4923          --------------------DVWGSVARIIAGRHVAVTSIVTGAHTDPHT
MAV_0583|M.avium_104                --------------------DVWGSVARAVAGGHVAVASILSGSDQDPHS
TH_1746|M.thermoresistible__bu      --------------------DVWGSVAATVAGDHVPVTSIISGPQHDPHS
MAB_0577c|M.abscessus_ATCC_199      --------------------DAWASVAQAVTGDHAKVSALVSGADTDPHS
Mvan_5320|M.vanbaalenii_PYR-1       -------------------VDQWGNIVSQLGGACAEVTTVLAGSAVDPHD
Mflv_1454|M.gilvum_PYR-GCK          -------------------VDQWGDIVSQLGGVCTRVTTVVAGSSVDPHD
MSMEG_6047|M.smegmatis_MC2_155      -------------------VDQWGDIVSELGGACAKVTTVLAGSSVDPHD
                                                        * *..:.  : *    * ::::*.  *** 

Mb2085|M.bovis_AF2122/97            YQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVDAYSLLG--
Rv2059|M.tuberculosis_H37Rv         YQASPADAAAIVDAELVIYNGGGYDPWVDQVLAGHPGVQAVDAYSLLG--
MMAR_5071|M.marinum_M               YQASPVDAAMIADSSLLIYNGGGYDPWVDNVLANHPAINAIDAYSLLG--
MUL_4147|M.ulcerans_Agy99           YQASPVDAAMIADSSLLIYNGGGYDPWVDNVLANHPAINAIDAYPLLG--
MLBr_00337|M.leprae_Br4923          YRVNPAETAAITDAALVVYNGGGYDPWVDKVLAGRPDIKSVDAYSLLASR
MAV_0583|M.avium_104                YEASPSDAAAIADAGLVVFNGGGYDGWVDDVLAHHPGVARVDAYALLP--
TH_1746|M.thermoresistible__bu      YEASPADAAALTDAALVVYNGGGYDRWATEVLAGRPDVRVVDAFALLP--
MAB_0577c|M.abscessus_ATCC_199      FEVTPAAAAQVQDATLVVYNGDGYDPFIDKLLKD--GEPRVNAYQLLP--
Mvan_5320|M.vanbaalenii_PYR-1       YEPAPSDAADFEGAQLVVLNGGHYDEWAAKLAATSAADAPVVNAVELSGG
Mflv_1454|M.gilvum_PYR-GCK          FEPAPSDAVAFEGAQLVVVNGGHYDEWATKLAQTSAPDAHLIDAVALSTG
MSMEG_6047|M.smegmatis_MC2_155      FEPSPSDAAKFEGAQLVVINGGHYDEWAGKLARSSAPNAPVVAAVADAG-
                                    :.  *  :. . .: *:: **. ** :  .:         :         

Mb2085|M.bovis_AF2122/97            ---------------------------AVGDDDAPNEHVFYDPNVAKAVA
Rv2059|M.tuberculosis_H37Rv         ---------------------------AVGDDDAPNEHVFYDPNVAKAVA
MMAR_5071|M.marinum_M               ---------------------------TDAAR-PPDEHVFYNLHVAKSVA
MUL_4147|M.ulcerans_Agy99           ---------------------------TDAAR-PPDEHVFYNLHVAKSVA
MLBr_00337|M.leprae_Br4923          ---------------------------GATTEGPADEHVFYDLNIAKSVA
MAV_0583|M.avium_104                -----------------------------DAGRPRNEHVFYHLGVAKAVA
TH_1746|M.thermoresistible__bu      -----------------------------ADEPATNEHVFYHLDVAAAVA
MAB_0577c|M.abscessus_ATCC_199      -----------------------------ADSADKNEHVFYSLRTAQQVA
Mvan_5320|M.vanbaalenii_PYR-1       HAEQGQEHAGEDGHGHAEEGQEHAGEQGQELGDEGNPHVWYNPTAVTEFA
Mflv_1454|M.gilvum_PYR-GCK          HS--GHEDHGHEGHDH--EGHDHA--------DEGNPHVWYRPSAVTEVV
MSMEG_6047|M.smegmatis_MC2_155      ----AHEDDAHD-HGHDEHGHAHA-------EEGVNPHAWYSPAAVTTVA
                                                                       : *.:*    .  ..

Mb2085|M.bovis_AF2122/97            ATIADRLADLDPSNSGNYRANAAEFSRGADAIAISEHAIATTYPDAAVIA
Rv2059|M.tuberculosis_H37Rv         ATIADRLADLDPSNSGNYRANAAEFSRGADAIAISEHAIATTYPDAAVIA
MMAR_5071|M.marinum_M               ATIAERLAIIDPAHAAEYRTNAVEFGRNADAIVDSERAIGAEHPAVGVIA
MUL_4147|M.ulcerans_Agy99           ATIAERLAIIDPAHAAEYRTNAVEFGRNADAIGDSERAIGAEHPAVGVIA
MLBr_00337|M.leprae_Br4923          SLIADQLVTIDPDNAADYQANATEFCRSADAIAISEHAIASDYPAAGVIV
MAV_0583|M.avium_104                AAVADRLAAIDPGNAADYRRNAAAFGRDADAIAGIEHTIAAAHPGGSVVA
TH_1746|M.thermoresistible__bu      ENIAEELAEIDPEHADDFRANAAEFTRQAGEIAATARAVGEQHPDASVVS
MAB_0577c|M.abscessus_ATCC_199      NNVADDLAKADPGNADSYHANAKTFGQQLDSIASLQEDVATKYRGKAILA
Mvan_5320|M.vanbaalenii_PYR-1       EAVTAQLGKLSPDAAGYFAERHAEFAESMKPYDEVIAAIKAGATGRTYAA
Mflv_1454|M.gilvum_PYR-GCK          DAVTAELTALSADAAGYFADRHRAFVESMKPYEDTVAAIRAGATGKTYAA
MSMEG_6047|M.smegmatis_MC2_155      DEVTAKLGDLAPEAKDYFAERRAAFTESMKPYNQLIDDIKAKASGKTYAA
                                      ::  *    .     :  .   * .           :           

Mb2085|M.bovis_AF2122/97            TEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVLDMIAGREVA
Rv2059|M.tuberculosis_H37Rv         TEPVVHYLLAAAGLKNRTPATFIAANENGNDPTPADMAAVLDMIAGREVA
MMAR_5071|M.marinum_M               TEPVVHYLLAASGLVNRTPAAFAQANENDSDPAPADLASVLTLIDRREVA
MUL_4147|M.ulcerans_Agy99           TEPVVHYLLAASGLVNRTPAAFAQANENDSDPAPADLASVLTLIDRREVA
MLBr_00337|M.leprae_Br4923          TEPVVHYLLQASGLVNRTPPAFTATHENENDPSAADMAAALNLINHRQVS
MAV_0583|M.avium_104                TEPVAFYLLEASGLVNRTPPALEAAVENETDPAPADLARALDLLDRRQVS
TH_1746|M.thermoresistible__bu      TEPVAYYLLANAGISDRTPAGFAVAVEEGADPSPADVAAMLDLLESGEVS
MAB_0577c|M.abscessus_ATCC_199      TEPVASHLVSRCGLVDRTPHAFAEAAEQGQDPSPADVASALDLISTKQVA
Mvan_5320|M.vanbaalenii_PYR-1       TESVFGDMATALGLVDRTPQGYQVAAANESDPSPADLDAFLQLLADRGVD
Mflv_1454|M.gilvum_PYR-GCK          AEGAFDDMAAALGLTNRTPPGFQVAAANHSEPSPADLDAFLNLLSERGVD
MSMEG_6047|M.smegmatis_MC2_155      TEAVFDDMAAAVGLTDRTPPGYQVASSNETDPSPADFDAFLTLLENRGVD
                                    :* .   :    *: :***     :  :  :*:.**.   * ::    * 

Mb2085|M.bovis_AF2122/97            ALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPD
Rv2059|M.tuberculosis_H37Rv         ALLVNPQTPTAATDELQVAARRAGVPITELTETLPSGTDRDQFCAADRPD
MMAR_5071|M.marinum_M               ALLVNPQTATATTAGLQAAAHRAGVPVAEVSETMPIDTDY----------
MUL_4147|M.ulcerans_Agy99           ALLVNPQTATATTAGLQAAAHRAGVPVAEVSETMPIDTDY----------
MLBr_00337|M.leprae_Br4923          ALLVNPQKSNAATNGLQAAARRSGVPVTEVTEMLPNDTDY----------
MAV_0583|M.avium_104                ALVVNPQTSASAVNGLREAARRAGVPVVEVRETLPDGADY----------
TH_1746|M.thermoresistible__bu      ALLSNPQTETPATRQIEAAAERASVPVVSVTETLPADTDY----------
MAB_0577c|M.abscessus_ATCC_199      ALLFNPQTAGSVTNRIKQAAESHGVPVVTVTETLPEGTDY----------
Mvan_5320|M.vanbaalenii_PYR-1       VLIYNTQTEGSVPEQIRSAAEQAGIAVVDVTETLPSDAKS----------
Mflv_1454|M.gilvum_PYR-GCK          VLVYNTQTEGSVPEQIRRAAEQSGVPVVEVTETLPSDAGS----------
MSMEG_6047|M.smegmatis_MC2_155      VLIYNVQTEGSVPQQLRTAAESAGIPVVEVTETVAPGADS----------
                                    .*: * *.  ..   :. **.  .:.:. : * :. .:            

Mb2085|M.bovis_AF2122/97            RRGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPG
Rv2059|M.tuberculosis_H37Rv         RRGRSLRADHADRGLSARGHRVGDLLPTALVCHRRSGGRGRPRRASARPG
MMAR_5071|M.marinum_M               --------------LTWQRNTV-DQLAAALRSGR----------------
MUL_4147|M.ulcerans_Agy99           --------------LTWQRNTV-DQLAAALRSGR----------------
MLBr_00337|M.leprae_Br4923          --------------LTWQRNTI-DQLLTALQSNRSPR-------------
MAV_0583|M.avium_104                --------------LSWQRNTV-GQLQTALQPVRSLQP------------
TH_1746|M.thermoresistible__bu      --------------LTWQRRTVEELAATLSRPAPAHR-------------
MAB_0577c|M.abscessus_ATCC_199      --------------VTWQRRTT-EQLAAALG-------------------
Mvan_5320|M.vanbaalenii_PYR-1       --------------FQDWQVAQLDSLAKALDVRT----------------
Mflv_1454|M.gilvum_PYR-GCK          --------------FQDWQVAQLDSLAEALGVGT----------------
MSMEG_6047|M.smegmatis_MC2_155      --------------FEAWQVDQLTALAKALGVES----------------
                                                  .                                   

Mb2085|M.bovis_AF2122/97            NCVRRTDGRGSRPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGG
Rv2059|M.tuberculosis_H37Rv         NCVRRTDGRGSRPGCPDRRGTPRDVFADHPRRGGRPGRGCPGRRDRDLGG
MMAR_5071|M.marinum_M               --------------------------------------------------
MUL_4147|M.ulcerans_Agy99           --------------------------------------------------
MLBr_00337|M.leprae_Br4923          --------------------------------------------------
MAV_0583|M.avium_104                --------------------------------------------------
TH_1746|M.thermoresistible__bu      --------------------------------------------------
MAB_0577c|M.abscessus_ATCC_199      --------------------------------------------------
Mvan_5320|M.vanbaalenii_PYR-1       --------------------------------------------------
Mflv_1454|M.gilvum_PYR-GCK          --------------------------------------------------
MSMEG_6047|M.smegmatis_MC2_155      --------------------------------------------------
                                                                                      

Mb2085|M.bovis_AF2122/97            LRRGFRRRRHPAVAGAWSPGVGVRGHHLVCDLPDLLVAPAAPLTSRSRFR
Rv2059|M.tuberculosis_H37Rv         LRRGFRRRRHPAVAGAWSPGVGVRGHHLVCDLPDLLVAPAAPLTSRSRFR
MMAR_5071|M.marinum_M               --------------------------------------------------
MUL_4147|M.ulcerans_Agy99           --------------------------------------------------
MLBr_00337|M.leprae_Br4923          --------------------------------------------------
MAV_0583|M.avium_104                --------------------------------------------------
TH_1746|M.thermoresistible__bu      --------------------------------------------------
MAB_0577c|M.abscessus_ATCC_199      --------------------------------------------------
Mvan_5320|M.vanbaalenii_PYR-1       --------------------------------------------------
Mflv_1454|M.gilvum_PYR-GCK          --------------------------------------------------
MSMEG_6047|M.smegmatis_MC2_155      --------------------------------------------------
                                                                                      

Mb2085|M.bovis_AF2122/97            PL
Rv2059|M.tuberculosis_H37Rv         PL
MMAR_5071|M.marinum_M               --
MUL_4147|M.ulcerans_Agy99           --
MLBr_00337|M.leprae_Br4923          --
MAV_0583|M.avium_104                --
TH_1746|M.thermoresistible__bu      --
MAB_0577c|M.abscessus_ATCC_199      --
Mvan_5320|M.vanbaalenii_PYR-1       --
Mflv_1454|M.gilvum_PYR-GCK          --
MSMEG_6047|M.smegmatis_MC2_155      --