For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MPRFDPLPDRRPALVAGASSGIGEATAIALAAHGFPVALGARRVEKCQEIVDKIRADGGEAIAVHLDVTD PDSVKSAVEQTTVELGEIEVLVAGAGDTYFGKLDAISTEEFESQIQIHLIGANRVATAVLPGMIERRRGD LIFVGSDVALRQRPHMGAYGAAKAALVAMVTNYQMELEGTGVRASIVHPGPTKTAMGWSLPAELIGPALE DWAKWGQARHDYFLRAADLARAITFVAETPRGGFIASMELQPEAPLASVKDRQQLKVDKEALNS
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_5160 | - | - | 100% (274) | short chain dehydrogenase |
| M. vanbaalenii PYR-1 | Mvan_4098 | - | 1e-23 | 32.49% (197) | short-chain dehydrogenase/reductase SDR |
| M. vanbaalenii PYR-1 | Mvan_4185 | - | 9e-23 | 30.00% (240) | short-chain dehydrogenase/reductase SDR |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0788c | - | 1e-107 | 70.70% (273) | short chain dehydrogenase |
| M. gilvum PYR-GCK | Mflv_1597 | - | 1e-140 | 90.15% (274) | short chain dehydrogenase |
| M. tuberculosis H37Rv | Rv0765c | - | 1e-107 | 70.70% (273) | short chain dehydrogenase |
| M. leprae Br4923 | MLBr_00429 | - | 2e-25 | 32.58% (221) | putative oxidoreductase |
| M. abscessus ATCC 19977 | MAB_1215c | - | 1e-104 | 66.18% (275) | short chain dehydrogenase |
| M. marinum M | MMAR_4931 | - | 1e-131 | 83.21% (274) | short-chain alcohol dehydrogenase |
| M. avium 104 | MAV_0709 | - | 1e-129 | 83.46% (272) | short chain dehydrogenase |
| M. smegmatis MC2 155 | MSMEG_5862 | - | 1e-124 | 80.51% (272) | short chain dehydrogenase |
| M. thermoresistible (build 8) | TH_1257 | - | 1e-124 | 82.71% (266) | short chain dehydrogenase |
| M. ulcerans Agy99 | MUL_0474 | - | 1e-128 | 81.75% (274) | short chain dehydrogenase |
CLUSTAL 2.0.9 multiple sequence alignment
Mb0788c|M.bovis_AF2122/97 MPRFEPHPARRTTVVAGASSGIGAATATELAGRGFPVALGARRMDKLAEL
Rv0765c|M.tuberculosis_H37Rv MPRFEPHPARRTTVVAGASSGIGAATATELAGRGFPVALGARRMDKLAEL
MAB_1215c|M.abscessus_ATCC_199 MPRFEPHPARRPSIIAGASSGIGAATAIELAGRGFPVALGARRVDKLTEL
Mvan_5160|M.vanbaalenii_PYR-1 MPRFDPLPDRRPALVAGASSGIGEATAIALAAHGFPVALGARRVEKCQEI
Mflv_1597|M.gilvum_PYR-GCK MPRFDPLPDRRPALVAGASSGIGEATAIRLAANGFPVALGARRVEKLEEI
MAV_0709|M.avium_104 MPRFDPLPERRPAIVAGASSGIGEATAIELAAHGFPVALGARRVEKLNDI
MMAR_4931|M.marinum_M MPRFQPHPDRRPAIVAGASSGIGAATAVELAAHGFPVALGARRVQKCEEI
MUL_0474|M.ulcerans_Agy99 MPRFQPHPDRRPAIVAGASPGIGAATAVDLAAHGFPDALGARRVQKCEKI
TH_1257|M.thermoresistible__bu MPRFDPHPERRPAIVAGASSGIGAATAKELAARGFPVALGARRVEKCEEL
MSMEG_5862|M.smegmatis_MC2_155 MARFEPHPARRPAIVAGASSGIGAATATELAAHGFPVALGARRVEKCQEL
MLBr_00429|M.leprae_Br4923 MPIPAPSPEAR-AVVTGASQNIGEALATELAAHGHSLIVIARREDVLVDL
*. * * * ::::*** .** * * **..*.. : *** : .:
Mb0788c|M.bovis_AF2122/97 VDKIRADGGEAVAF-PLDVTDPESVKSFVAQTVEALGEVELLVSSAGDML
Rv0765c|M.tuberculosis_H37Rv VDKIRADGGEAVAF-PLDVTDPESVKSFVAQTVEALGEVELLVSSAGDML
MAB_1215c|M.abscessus_ATCC_199 VEKIRSDGGEAVAF-PLDVTDADSVKSFVAESIDALGEIDLLVSGAGDMY
Mvan_5160|M.vanbaalenii_PYR-1 VDKIRADGGEAIAV-HLDVTDPDSVKSAVEQTTVELGEIEVLVAGAGDTY
Mflv_1597|M.gilvum_PYR-GCK VGKIRADGGEAIAV-HLDVTEPDSVKAAVEQTTSQLGDIEVLVAGAGDTY
MAV_0709|M.avium_104 VGKINADGGEAVGF-HLDVTDPNSVKSFVAQAVDALGDIEVLVAGAGDTY
MMAR_4931|M.marinum_M VEKIRADGGDAVAL-ALDVTDADSVKDFVHQATERLGDIEVLVAGAGDTY
MUL_0474|M.ulcerans_Agy99 VEKIRADGGDAVAL-ALDVTDADSVKDFVHQATERLGDIEVLVAGAGDTY
TH_1257|M.thermoresistible__bu VEQIRADGGEAVAL-HLDVTDPDSVKSFVHGAAEKLGDIEVLVAGAGDTF
MSMEG_5862|M.smegmatis_MC2_155 VDQITARGGEAVAL-PLDVTDADSVKSFVHAATEALGDIEVLIAGAGDTD
MLBr_00429|M.leprae_Br4923 AARLADKYRVAVEVRPADLTDPSERVKLADELTVRP--ISILCANAGTAT
. :: *: . *:*:... . :.:* :.**
Mb0788c|M.bovis_AF2122/97 PGQLHEVSTEAFAEQVQIHLVGANRLATAVLPAMVARRRGDLIFVGSDVG
Rv0765c|M.tuberculosis_H37Rv PGQLHEVSTEAFAEQVQIHLVGANRLATAVLPAMVARRRGDLIFVGSDVG
MAB_1215c|M.abscessus_ATCC_199 PGRVHEMSAATFAAQIQVHLLGANQLATEVVPDMVSRRRGDVVFIGSDVA
Mvan_5160|M.vanbaalenii_PYR-1 FGKLDAISTEEFESQIQIHLIGANRVATAVLPGMIERRRGDLIFVGSDVA
Mflv_1597|M.gilvum_PYR-GCK FGKLDSISTEQFESQIQIHLIGANRVAGAVLPGMIERRRGDLIFVGSDVA
MAV_0709|M.avium_104 FGKLAEIAGDEFESQLQIHLVGAFRLASAVLPGMLERQRGDLIFVGSDVA
MMAR_4931|M.marinum_M FGRLYEIDTETFESQVQIHLIGANRLATAVLPGMLERQRGDLIFVGSDVA
MUL_0474|M.ulcerans_Agy99 FGRLYEIDTETFESQVQIHLIGANRLATAVLPGMLERQRGDLIFVGSDVA
TH_1257|M.thermoresistible__bu FGRLHEISTEEFESQVQIHLIGANRLATAVLPGMVERRRGDLIFVGSDVA
MSMEG_5862|M.smegmatis_MC2_155 FGRLHEISTEEFEQQVQIHLIGANRMATAVLPGMVERRRGDVIFVGSDVS
MLBr_00429|M.leprae_Br4923 FGPVSALDPAGEKAQVQLNAVAVHDLTLAVLPGMIERKAGGILISGSAAG
* : : *:*:: :.. :: *:* *: *: *.::: ** ..
Mb0788c|M.bovis_AF2122/97 LRQRPHMGAYGAAKAGLAAMVTNLQMELEGTGVRASIVHPGPTLTGMGWQ
Rv0765c|M.tuberculosis_H37Rv LRQRPHMGAYGAAKAGLAAMVTNLQMELEGTGVRASIVHPGPTLTGMGWQ
MAB_1215c|M.abscessus_ATCC_199 LHQRPHMGAYGAAKAALLAMVNTMRMELEGTGVRASIVHPGPTLTSMGWQ
Mvan_5160|M.vanbaalenii_PYR-1 LRQRPHMGAYGAAKAALVAMVTNYQMELEGTGVRASIVHPGPTKTAMGWS
Mflv_1597|M.gilvum_PYR-GCK LRQRPHMGAYGAAKAALVAMVTNYQMELEGTGVRASIVHPGPTKTSMGWS
MAV_0709|M.avium_104 LRQRPHMGAYGAAKAALVAMVNNFQMELEGTGVRASVVHPGPTKTAMGWS
MMAR_4931|M.marinum_M LRQRPHMGAYGAAKAALVAMVTNLQMELEGTGLRASIVHPGPTKTAMGWS
MUL_0474|M.ulcerans_Agy99 LRQRPHMGAYGAAKAALVAMVTNLQMELEGTGLRASIVHPGRTKTAMGWS
TH_1257|M.thermoresistible__bu LRQRPHMGGYGAAKAGLLAMVHNLQMELEGTGVRASIVHPGPTKTAMGWS
MSMEG_5862|M.smegmatis_MC2_155 LRQRPHMGAYGAAKAGLLAMVNNLQMELEGTGVRASIVHPGPTRTSMGWS
MLBr_00429|M.leprae_Br4923 NSPIPYNATYAATKAFANTFSESLRGELHGSGVHVTLLAPGPVRTELPDH
*: . *.*:** :: . : **.*:*::.::: ** . * :
Mb0788c|M.bovis_AF2122/97 LSAEQVGPMLADWAKWGQARHNYFLRPSDLAR-AIAFVAETPRGCVVVNM
Rv0765c|M.tuberculosis_H37Rv LSAEQVGPMLADWAKWGQARHNYFLRPSDLAR-AIAFVAETPRGCVVVNM
MAB_1215c|M.abscessus_ATCC_199 LSAEQVGPMLEDWKSWGQARHSYFLRPSDIAR-AVTFVAETPRGAHIPEM
Mvan_5160|M.vanbaalenii_PYR-1 LPAELIGPALEDWAKWGQARHDYFLRAADLAR-AITFVAETPRGGFIASM
Mflv_1597|M.gilvum_PYR-GCK LPAELIGPALEDWAKWGQARHDYFLRADDLAR-AITFVAETPRGGFIANM
MAV_0709|M.avium_104 LPAEKIGPALEDWAKWGQARHDYFLRAADLAR-AITFVAETPRGGFIANM
MMAR_4931|M.marinum_M LPVESIGPALEDWAKWGQARHDYFLRASDIAR-AITFVAETPRGGFVANM
MUL_0474|M.ulcerans_Agy99 LPVESIGPALEDWAKWGQARHDYFLRASDIAR-AITFVAETPRGGFVANM
TH_1257|M.thermoresistible__bu LPPDRIEQALNDWAKWGQARHDYFLRASDLAR-AIAFVAETPRGGFIANM
MSMEG_5862|M.smegmatis_MC2_155 LPAEKIGPALEDWAKWGQARHDYFLRAADLAR-AITFVAETPRGGFIANL
MLBr_00429|M.leprae_Br4923 DEASLVEKLVPDFL-WISTEHTARLSLDALERNKMRVVPGLTSKAMSVAS
. : : *: * .:.* * : * : .*. .
Mb0788c|M.bovis_AF2122/97 EIQPEAPLRDAPAHRQKLVLGEEGMPG-
Rv0765c|M.tuberculosis_H37Rv EIQPEAPLRDAPAHRQKLVLGEEGMPG-
MAB_1215c|M.abscessus_ATCC_199 EVQPEAPLKDAPADKQKLELGEEGMPS-
Mvan_5160|M.vanbaalenii_PYR-1 ELQPEAPLASVKD-RQQLKVDKEALNS-
Mflv_1597|M.gilvum_PYR-GCK ELQPEAPLSEAKD-RQKLALGEEGMPS-
MAV_0709|M.avium_104 ELQPEAPLADNKD-RQKLALGEEGMPGQ
MMAR_4931|M.marinum_M ELQPEAPLAATTN-RQQLKVDEKAKDS-
MUL_0474|M.ulcerans_Agy99 ELQPEAPLAATTN-RQQLKVDEKAKDS-
TH_1257|M.thermoresistible__bu ELQPEAPLADAPKERQQLTYPETS----
MSMEG_5862|M.smegmatis_MC2_155 EIQPEAPLAEVTD-RQKLALGEEGMPNQ
MLBr_00429|M.leprae_Br4923 RYAPRAIVASIVG-NFYKKLGGG-----
. *.* : .