For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTGSTAPEAHPQLRRDLSIDQRLALKSAATQLEKEFDGIYGVETIELFLHSSYDQFAGRASIVNFLPLLA ERFARQRLRALAKVEGKSQDGKPTVLFLCTHNAGRSQMAMGFFTALAGDAAVAWSGGSEPGDEVNPAAVE AMAERGIDISREYPKPWTEEIVRAADVIITMGCGDACPVFPGRRYEEWKLDDPAGQSVDDVRPIRDEIER RVRTLLVELDVPAQG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_5094 | - | - | 100% (225) | protein tyrosine phosphatase |
M. vanbaalenii PYR-1 | Mvan_3221 | - | 2e-90 | 73.61% (216) | protein tyrosine phosphatase |
M. vanbaalenii PYR-1 | Mvan_3220 | - | 1e-15 | 35.71% (126) | protein tyrosine phosphatase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2676 | arsC | 3e-39 | 60.16% (128) | arsenic-transport integral membrane protein ArsC |
M. gilvum PYR-GCK | Mflv_1659 | - | 1e-110 | 86.61% (224) | protein tyrosine phosphatase |
M. tuberculosis H37Rv | Rv2643 | arsC | 5e-39 | 60.16% (128) | arsenic-transport integral membrane protein ArsC |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4842 | - | 5e-90 | 73.58% (212) | putative arsenate reductase ArsC |
M. marinum M | MMAR_2055 | arsC | 5e-40 | 60.16% (128) | arsenic-transport integral membrane protein ArsC |
M. avium 104 | MAV_1496 | - | 5e-91 | 72.85% (221) | low molecular weight phosphotyrosine protein phosphatase |
M. smegmatis MC2 155 | MSMEG_1171 | - | 3e-57 | 76.74% (129) | low molecular weight phosphotyrosine protein phosphatase |
M. thermoresistible (build 8) | TH_1049 | arsC | 9e-46 | 64.62% (130) | PROBABLE ARSENIC-TRANSPORT INTEGRAL MEMBRANE PROTEIN ARSC |
M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mvan_5094|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_1659|M.gilvum_PYR-GCK -------------------------------------------------- MAB_4842|M.abscessus_ATCC_1997 -------------------------------------------------- MAV_1496|M.avium_104 -------------------------------------------------- MSMEG_1171|M.smegmatis_MC2_155 -------------------------------------------------- Mb2676|M.bovis_AF2122/97 MTETVTRTAAPAVVGKLSTLDRFLPVWIGSAMAAGLLLGRWIPGLHTALE Rv2643|M.tuberculosis_H37Rv MTETVTRTAAPAVVGKLSTLDRFLPVWIGSAMAAGLLLGRWIPGLHTALE MMAR_2055|M.marinum_M MTGTVDHQPAPAVVGKLSTLDRFLPVWIGLAMAAGLLLGRWIPGLNTALE TH_1049|M.thermoresistible__bu -------------------------------------------------- Mvan_5094|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_1659|M.gilvum_PYR-GCK -------------------------------------------------- MAB_4842|M.abscessus_ATCC_1997 -------------------------------------------------- MAV_1496|M.avium_104 -------------------------------------------------- MSMEG_1171|M.smegmatis_MC2_155 -------------------------------------------------- Mb2676|M.bovis_AF2122/97 GVQLDGISLPIALGLLIMMYPVLAKVRYDRLDTVTGDRKLLLSSLLLNWV Rv2643|M.tuberculosis_H37Rv GVQLDGISLPIALGLLIMMYPVLAKVRYDRLDTVTGDRKLLLSSLLLNWV MMAR_2055|M.marinum_M KVQVDGISLPIALGLLIMMYPVLAKVRYDRLDSVTGDRKLLISSLLLNWV TH_1049|M.thermoresistible__bu -------------------------------------------------- Mvan_5094|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_1659|M.gilvum_PYR-GCK -------------------------------------------------- MAB_4842|M.abscessus_ATCC_1997 -------------------------------------------------- MAV_1496|M.avium_104 -------------------------------------------------- MSMEG_1171|M.smegmatis_MC2_155 -------------------------------------------------- Mb2676|M.bovis_AF2122/97 LGPALMFALAWLLLADLPEYRTGLIIVGLARCIAMVIIWNDLACGDREAA Rv2643|M.tuberculosis_H37Rv LGPALMFALAWLLLADLPEYRTGLIIVGLARCIAMVIIWNDLACGDREAA MMAR_2055|M.marinum_M AGPALMFALAWLLLPDLPEYRTGLIIVGLARCIAMVIIWNDLARGDREAA TH_1049|M.thermoresistible__bu -------------------------------------------------- Mvan_5094|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_1659|M.gilvum_PYR-GCK -------------------------------------------------- MAB_4842|M.abscessus_ATCC_1997 -------------------------------------------------- MAV_1496|M.avium_104 -------------------------------------------------- MSMEG_1171|M.smegmatis_MC2_155 -------------------------------------------------- Mb2676|M.bovis_AF2122/97 AVLVALNSIFQVAMFAALGWFYLSVLPGWLGLEQTTIATSPWQIAKSVLI Rv2643|M.tuberculosis_H37Rv AVLVALNSIFQVAMFAALGWFYLSVLPGWLGLEQTTIATSPWQIAKSVLI MMAR_2055|M.marinum_M AVLVALNSIFQVAMFAVLGWFYLSVLPGWLHLTQTTISTSPWQIAKSVLI TH_1049|M.thermoresistible__bu -------------------------------------------------- Mvan_5094|M.vanbaalenii_PYR-1 -------------------------------------------------- Mflv_1659|M.gilvum_PYR-GCK -------------------------------------------------- MAB_4842|M.abscessus_ATCC_1997 -------------------------------------------------- MAV_1496|M.avium_104 -------------------------------------------------- MSMEG_1171|M.smegmatis_MC2_155 -------------------------------------------------- Mb2676|M.bovis_AF2122/97 FLGIPLLAGYLSRRIGEKTKGRNWYESRFLPKVGPWALYGLLFTIVILFA Rv2643|M.tuberculosis_H37Rv FLGIPLLAGYLSRRIGEKTKGRNWYESRFLPKVGPWALYGLLFTIVILFA MMAR_2055|M.marinum_M FLGIPLLAGYLSRRLGERAKGRGWYESRFLPKVGPWALYGLLFTIVILFA TH_1049|M.thermoresistible__bu -------------------------------------------------- Mvan_5094|M.vanbaalenii_PYR-1 -MTGSTAPEAHPQLRRDLS--------------IDQRLALKSAATQLEKE Mflv_1659|M.gilvum_PYR-GCK -MTDSIAPDTHPHLRHDLS--------------IDQRLALKAAATHLETE MAB_4842|M.abscessus_ATCC_1997 -MTGQASTEP----RQELT--------------LDQVHALKTAATRLQQE MAV_1496|M.avium_104 -MTDSPASLA-AHVRRDIS--------------IDQQLALRTASTRLHDD MSMEG_1171|M.smegmatis_MC2_155 -------------------------------------------------- Mb2676|M.bovis_AF2122/97 LQGDQITGRPLDVARIALPLLAYFAIMWVGGYLLGAALRLGYRRTTTLAF Rv2643|M.tuberculosis_H37Rv LQGDQITGRPLDVARIALPLLAYFAIMWVGGYLLGAALRLGYRRTTTLAF MMAR_2055|M.marinum_M LQGDQITNRPQDVARIALPLLVYFAVMWGGGYLLGAALHLGYQRTTTMAF TH_1049|M.thermoresistible__bu -------------------------------------------------- Mvan_5094|M.vanbaalenii_PYR-1 FDGIYGVETIELFLHSSYDQFAGRASIVNFLPLLAERFAR--------QR Mflv_1659|M.gilvum_PYR-GCK FDGMYGMETIERFLHSSYDQFAGRASIPNFLPLLAERFAR--------QR MAB_4842|M.abscessus_ATCC_1997 FEGTFGTETIERFLQSSYGQFAGRASVSRFLPLLAERFAR--------QR MAV_1496|M.avium_104 FAEHFGVETIERFLHSSYDQFAGRATVPNFLPLLAERWAR--------QR MSMEG_1171|M.smegmatis_MC2_155 -------------------------------------------------- Mb2676|M.bovis_AF2122/97 TAASNNFELAIAVAIATYGATSGQALAGVVGPLIEVPVLVGLVYVSLALR Rv2643|M.tuberculosis_H37Rv TAASNNFELAIAVAIATYGATSGQALAGVVGPLIEVPVLVGLVYVSLALR MMAR_2055|M.marinum_M TAAGNNFELAIAVAIATYGATSGQALAGVVGPLIEVPVLVGLVYVSLALR TH_1049|M.thermoresistible__bu --------------MTSDSAT----------------------------- Mvan_5094|M.vanbaalenii_PYR-1 LRALAKVEGKSQDGKPTVLFLCTHNAGRSQMAMGFFTALAGDAAVAWSGG Mflv_1659|M.gilvum_PYR-GCK LRALAKIEGKHHDGKPTVLFLCTHNAGRSQMAMGFFTHLAGDAAVAWSGG MAB_4842|M.abscessus_ATCC_1997 LRALARVEGKSADGRPTVLFLCIHNAGRSQMALGFFQAVAGDSAVAWSGG MAV_1496|M.avium_104 LTALARVEGKVTDTKPTVLFLCTHNAGRSQMALGYFNHLAGDQGVAWSGG MSMEG_1171|M.smegmatis_MC2_155 ------MTG------PTVLFLCTHNAGRSQMALGYFTHLAGDGAVAWSGG Mb2676|M.bovis_AF2122/97 NRLAGPN-ATHDADKPSVLFVCVHNAGRSQMAAGLLTHLAGDRIEVRSAG Rv2643|M.tuberculosis_H37Rv NRLAGPN-ATHDADKPSVLFVCVHNAGRSQMAAGLLTHLAGDRIEVRSAG MMAR_2055|M.marinum_M NRYYGPHRRKHDMIKPSVLFVCVHNAGRSQMAAGWLRHLAGDRIEVRSAG TH_1049|M.thermoresistible__bu -----------DNPTPSVLFVCVHNAGRSQMAAGFLTALAGGRIEVRSAG *:***:* ********* * : :**. . *.* Mvan_5094|M.vanbaalenii_PYR-1 SEPGDEVNPAAVEAMAERGIDISREYPKPWTEEIVRAADVIITMGCGDAC Mflv_1659|M.gilvum_PYR-GCK SEPGNEVNPAAVAAMAECNIDISREYPKPWTDEIVRAADVIITMGCGDAC MAB_4842|M.abscessus_ATCC_1997 SEPGTEVNAIAIAAMAERGIDISGEYPKPWTDEVVQAADVVVTMGCGDAC MAV_1496|M.avium_104 SEPGNEINPAAVQAMAEVGIDITREFPKPWTDEIVQASDVVVTMGCGDAC MSMEG_1171|M.smegmatis_MC2_155 SEPAAEINPVAVAAMAEVGIDITGEYPKPWTDEIVRVADVVITMGCGDTC Mb2676|M.bovis_AF2122/97 TEPAGQVNPTAVAAMAEMGIDITANAPTLLTGGQVQSSDVVITMGCGDAC Rv2643|M.tuberculosis_H37Rv TEPAGQVNPTAVAAMAEMGIDITANAPTLLTGGQVQSSDVVITMGCGDAC MMAR_2055|M.marinum_M TEPADRINPVAVAAMAELGIDITANTPEVLTGAWVQTSDVVITMGCGDAC TH_1049|M.thermoresistible__bu SAPADQLNPAAVEAMAEVGIDISTHQPKVLTTDAVQASDVVITMGCGDTC : *. .:*. *: **** .***: . * * *: :**::******:* Mvan_5094|M.vanbaalenii_PYR-1 PVFPGRRYEEWKLDDPAGQSVDDVRPIRDEIERRVRTLLVELD----VPA Mflv_1659|M.gilvum_PYR-GCK PVFPGLRYEEWKLEDPHGQGVDAVRPIRDEIERRVRALLSELD----VPV MAB_4842|M.abscessus_ATCC_1997 PVFPGRRYLDWTLDDPTGLDVEGLRPIRDEIERRVRHLVDELL----GAR MAV_1496|M.avium_104 PFFPGKRYENWDLTDPAGQGVDVVRPIRDEIESRVRRLLAELH----ITP MSMEG_1171|M.smegmatis_MC2_155 PVYPGKRYENWELPDPAGQALDAVRPIRDDIEHRVRRLLADLG----VAT Mb2676|M.bovis_AF2122/97 PYFPGASYRNWKLPDPAGQPLDVVRMIRDDIADRVQALIAEL-----LAT Rv2643|M.tuberculosis_H37Rv PYFPGVSYRNWKLPDPAGQPLDVVRMIRDDIADRVQALIAEL-----LAT MMAR_2055|M.marinum_M PYFPGVSYRDWTLADPAGQPLDVVRPIRDDIGERVRALIAEL-----LNE TH_1049|M.thermoresistible__bu PIFPGRSYRDWVLDDPAGKDLDDVRRIRDDIKARVEDLIAELDPPPDLNA * :** * :* * ** * :: :* ***:* **. *: :* Mvan_5094|M.vanbaalenii_PYR-1 QG------------- Mflv_1659|M.gilvum_PYR-GCK QS------------- MAB_4842|M.abscessus_ATCC_1997 Q-------------- MAV_1496|M.avium_104 VS------------- MSMEG_1171|M.smegmatis_MC2_155 IR------------- Mb2676|M.bovis_AF2122/97 AKTR----------- Rv2643|M.tuberculosis_H37Rv AKTR----------- MMAR_2055|M.marinum_M HPDTAQICRG----- TH_1049|M.thermoresistible__bu RDRPVPATRAGTTTR