For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TLRVVQWATGGVGVAAIKGVLEHPELELVGCWVHSPGKAGRDVGEIVGLDPLGVTATDSIDDILALEADA VIYSPLIANPDEVAALLRSGKNVVTPVGWLYPSERSGASMREAALAGNATLHGTGIAPGGISEKFPLMLS AMSTGVTFVRAEEFSDLRTYEAPDVLRHVMGFGETPDKALTGPMQKMLDTGFIQAVRMCVDQLGFAADPK VLATQEIAVATARIDSPMGPIEPGQVAGRKFHWEALVDGEPVVRVTVNWLMGEENLDPAWSFGPEGQRYE MEVRGNPDFTVSVKGFQSEVGGEGPEYGVVGTAAHCVNSVPAVCAAPPGIATYLDLPLISGKAAPAKARA GI*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_4692 | - | - | 100% (353) | dihydrodipicolinate reductase |
M. vanbaalenii PYR-1 | Mvan_4981 | - | 1e-57 | 39.02% (346) | dihydrodipicolinate reductase |
M. vanbaalenii PYR-1 | Mvan_4980 | - | 8e-49 | 37.04% (351) | dihydrodipicolinate reductase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1088 | - | 1e-149 | 70.74% (352) | hypothetical protein Mb1088 |
M. gilvum PYR-GCK | Mflv_2027 | - | 0.0 | 89.49% (352) | dihydrodipicolinate reductase |
M. tuberculosis H37Rv | Rv1059 | - | 1e-149 | 70.74% (352) | hypothetical protein Rv1059 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4633 | - | 1e-42 | 34.84% (353) | hypothetical protein MAB_4633 |
M. marinum M | MMAR_4411 | - | 1e-145 | 70.40% (348) | hypothetical protein MMAR_4411 |
M. avium 104 | MAV_0353 | - | 1e-123 | 60.68% (351) | hypothetical protein MAV_0353 |
M. smegmatis MC2 155 | MSMEG_5286 | dapB | 1e-168 | 81.50% (346) | dihydrodipicolinate reductase N-terminus domain-containing |
M. thermoresistible (build 8) | TH_1493 | - | 1e-167 | 80.06% (346) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_4353 | - | 1e-114 | 55.77% (355) | hypothetical protein MUL_4353 |
CLUSTAL 2.0.9 multiple sequence alignment Mb1088|M.bovis_AF2122/97 --MTMSLRVIQWATGSVGVAAIKGVLQHPELELVGCWVHSAAKSGKDVGE Rv1059|M.tuberculosis_H37Rv --MTMSLRVIQWATGSVGVAAIKGVLQHPELELVGCWVHSAAKSGKDVGE MMAR_4411|M.marinum_M ----MGLRVVQWATGSVGVAAIKGVLEHPELELVGCWVYSEAKSGVDVGE Mvan_4692|M.vanbaalenii_PYR-1 ----MTLRVVQWATGGVGVAAIKGVLEHPELELVGCWVHSPGKAGRDVGE Mflv_2027|M.gilvum_PYR-GCK ----MALRVVQWATGGVGIAAIHGVLAHPELELVGCWVHSKAKAGRDVGD MSMEG_5286|M.smegmatis_MC2_155 ----MALRVVQWATGGVGMAAIKGVLEHPALELVGCWVHSEGKAGRDVGE TH_1493|M.thermoresistible__bu ----MTFRVVQWATGGVGIAAIKGVLEHPELELVGCWVHSPDKAGRDVGE MAV_0353|M.avium_104 MSSPSKLRVIQWASGGVGKAAIQCVLNHPRLELAGCWVHSAEKNGVDVGR MUL_4353|M.ulcerans_Agy99 MSGPAKLRVIQWATGGVGKAAIECILNHPQLELAGCWVHSAAKHGLDVGT MAB_4633|M.abscessus_ATCC_1997 ---MTKTRVAVWGTGNVGQHALAGVITDPSMELVGVWVSGSNKAGKDAGA ** *.:*.** *: :: .* :**.* ** . * * *.* Mb1088|M.bovis_AF2122/97 IIGSPPLG-VIATNSIDDVLALDADAVIYAPLLPS-----VDEVAALLRS Rv1059|M.tuberculosis_H37Rv IIGSPPLG-VIATNSIDDVLALDADAVIYAPLLPS-----VDEVAALLRS MMAR_4411|M.marinum_M IIGTPPLG-VITTNSVDEILALDADAVIYAPLMPS-----VDEVAALLHS Mvan_4692|M.vanbaalenii_PYR-1 IVGLDPLG-VTATDSIDDILALEADAVIYSPLIAN-----PDEVAALLRS Mflv_2027|M.gilvum_PYR-GCK IVGTAPLG-VVATDSIDEILSLDADAVIYSPLIAD-----TEEVVALLKS MSMEG_5286|M.smegmatis_MC2_155 IIGTEPLG-VETTRDIDDILGLDADAVIYAPLLPN-----PEEVAALLRS TH_1493|M.thermoresistible__bu IIGAEPLG-ITATNSIDDILALDADAVIYAPLLPD-----PDEVAALLRS MAV_0353|M.avium_104 IIGTQELG-VTASTSVDEVLALDADCVVYSPLIPN-----DDEVIAILRS MUL_4353|M.ulcerans_Agy99 IIGAARFG-VTATNDVDELLALDADCVMYSPQVAD-----EQDVKAILRS MAB_4633|M.abscessus_ATCC_1997 LAGLDILTGITATTDAAQILALRPDCVVYTAMTDNRLMEALKDLTDLLSA : * : : :: . ::*.* .*.*:*:. . .:: :* : Mb1088|M.bovis_AF2122/97 GKNVVT--PLGWFYP----SEKEAAPLEVAAQAGNATLHGAGIGPGAVTE Rv1059|M.tuberculosis_H37Rv GKNVVT--PLGWFYP----SEKEAAPLEVAAQAGNATLHGAGIGPGAVTE MMAR_4411|M.marinum_M GKNVVT--PLGWFYP----TEKEAAPLEVAAQSGNATLHGAGIGPGAATE Mvan_4692|M.vanbaalenii_PYR-1 GKNVVT--PVGWLYP----SERSGASMREAALAGNATLHGTGIAPGGISE Mflv_2027|M.gilvum_PYR-GCK GKNVVT--PVGWLYP----SERSGAPLREAALAGDATLHGTGIAPGGISE MSMEG_5286|M.smegmatis_MC2_155 GKNVVT--PVGWVYP----SERQGAPLREAALAGNATLHGTGIAPGGISE TH_1493|M.thermoresistible__bu GKNVVT--PLGWFYP----TEKQAAPLRAAALEGGATLHGTGIAPGGISE MAV_0353|M.avium_104 GKNVVT--PVGWVYPD--PGNPRHRAVADAALESGVTLHGSGIHPGGITE MUL_4353|M.ulcerans_Agy99 GKNVFT--PVGWVYPD--LSKPRVKAVADAAVAGGVTLHGSGIHPGGITE MAB_4633|M.abscessus_ATCC_1997 GINVAASAPVFLQYPWGVLPENMLTPIENAAREGNSSIFAGGIDPGFAND * ** : *: ** : .: ** .. ::.. ** ** .: Mb1088|M.bovis_AF2122/97 LFPLLLSVMSTGVTFVRSEEFSDLRSYGAPDVLRYVMGFGGTPDSALTGP Rv1059|M.tuberculosis_H37Rv LFPLLLSVMSTGVTFVRSEEFSDLRSYGAPDVLRYVMGFGGTPDSALTGP MMAR_4411|M.marinum_M LFPLLLSVMSTGVTFVRSEEFSDLRTYGAPDVLRYVMGFGGTPDSALTGP Mvan_4692|M.vanbaalenii_PYR-1 KFPLMLSAMSTGVTFVRAEEFSDLRTYEAPDVLRHVMGFGETPDKALTGP Mflv_2027|M.gilvum_PYR-GCK KFPLMLSAMSTGVTFVRAEEYSDLRTYEAPDVLRHVMGFGETPDKALTGP MSMEG_5286|M.smegmatis_MC2_155 KFPLLFSVFSTGVTFVRAEEFSDLRTYDAPDVLRHVMGFGEVPDKALSGP TH_1493|M.thermoresistible__bu KLPLMFSALATGVTFVRAEEFSDLRTYDAPDVVRHVMGFGDTPEKALSGP MAV_0353|M.avium_104 RFPLMVSSLSSAVTHVRAEEFSDIRTYNAPDVVRHIMGFGGTPEEATGGP MUL_4353|M.ulcerans_Agy99 RFPLMVSSLSSAITHVRAEEFSDIRTYNAPDVVRDIMGFGVPHAQAMQGP MAB_4633|M.abscessus_ATCC_1997 LLPLALMGTCQRIDQVRCIEIVDYATYDSATVMFDVMGFGKPMEETPMLL :** . . : **. * * :* :. *: :**** .: Mb1088|M.bovis_AF2122/97 MQKILDGGFLQSVRLCVDRLGFAADPQIRTSQEVAVATAPIDSPIGVIEP Rv1059|M.tuberculosis_H37Rv MQKILDGGFLQSVRLCVDRLGFAADPQIRTSQEVAVATAPIDSPIGVIEP MMAR_4411|M.marinum_M MQKLLDGGFMQSVRLCVDRLGFAADPQIRTSQEVAVATSPIESPIGVIEP Mvan_4692|M.vanbaalenii_PYR-1 MQKMLDTGFIQAVRMCVDQLGFAADPKVLATQEIAVATARIDSPMGPIEP Mflv_2027|M.gilvum_PYR-GCK MQKMLDSGFIQAVRMVVDQLGFAADPKVRATQEIAVATAPIDSPMGQILP MSMEG_5286|M.smegmatis_MC2_155 MQKLLDGGFMQAVKMCVDQFGFAADPKIRSRQEIAVATAPIDSPLGAIQP TH_1493|M.thermoresistible__bu MQKLLDGGFIQAVRMCVDKIGFAADPQVRSRQEIAVATAPIESPIGVIEP MAV_0353|M.avium_104 MAGLLDGGFKQSVRMIADHMGFRIDPNIRTIQDVAVATADIDYDPFPITA MUL_4353|M.ulcerans_Agy99 MAALLESGFKMSVRMIANHMGFHIDPMIRATHEIAVATSDIASDVLPIAA MAB_4633|M.abscessus_ATCC_1997 QPGVLSLAWGSVVRQLAAGLGVELD-EVTEVYEKLSAPEDFDISSGHIPA :*. .: *: . :*. * : : *. : * . Mb1088|M.bovis_AF2122/97 GQVAGRRFHWEALVEDTVVVQIAVNWLMGSENLDPPWSFGP-AGERYEIE Rv1059|M.tuberculosis_H37Rv GQVAGRRFHWEALVEDTVVVQIAVNWLMGSENLDPPWSFGP-AGERYEIE MMAR_4411|M.marinum_M GQVAGRRFHWEAVVGDTAVVEITVNWLMGEENLDPPWSFGP-AGERYEIE Mvan_4692|M.vanbaalenii_PYR-1 GQVAGRKFHWEALVDGEPVVRVTVNWLMGEENLDPAWSFGP-EGQRYEME Mflv_2027|M.gilvum_PYR-GCK GQVAGRKFHWEALVGGQPVVRVTVNWLMGEENLEPAWSFGP-EGQRYEME MSMEG_5286|M.smegmatis_MC2_155 GQVAGRRFHWEALRGEQVVVRVTVNWLMGEENLDPPWTFGP-QGQRYEMQ TH_1493|M.thermoresistible__bu GQVAGRRFHWEALAGDEVVVRVTVNWLMGEEDLDPPWDFGP-AGQRYEIE MAV_0353|M.avium_104 GTVAARRFRWQALVDGEPVITAAVNWLMGEQNLDPAWDFGG-RGERFEVE MUL_4353|M.ulcerans_Agy99 DTVAGRKFRWQTLADGKPVITAAVNWLMGQADMHPDWSFGE-RGERFEIE MAB_4633|M.abscessus_ATCC_1997 GTMAALHFEVRGIKDGR-AVTVLEHFTRLREDLAPNWPQPAHEGGTYRVE . :*. :*. . : .: :: :: * * * :.:: Mb1088|M.bovis_AF2122/97 VRGSPDTCVTIKGWQPQTVAAGLKSNPGIVATAAHCVNAIPATCAAPAGI Rv1059|M.tuberculosis_H37Rv VRGSPDTCVTIKGWQPQTVAAGLKSNPGIVATAAHCVNAIPATCAAPAGI MMAR_4411|M.marinum_M VRGHPDAFVTIKGWQPDSVAAGLQSNPGIVATAAHCVNAVPATCAAPAGI Mvan_4692|M.vanbaalenii_PYR-1 VRGNPDFTVSVKGFQSEVGGEGPE--YGVVGTAAHCVNSVPAVCAAPPGI Mflv_2027|M.gilvum_PYR-GCK VRGNPDFTVSVKGFQSDIGGEGPE--YGVVGTAAHCVNSVPAVCAAAPGI MSMEG_5286|M.smegmatis_MC2_155 VCGNPDFDVVIKGFQGEVGETGPE--PGVVATAAHCVNSIPAVCAAEPGI TH_1493|M.thermoresistible__bu VRGNPDFTVTINGFQSEPGDHGPE--AGIVATAAHCVNSVPAVCAADPGL MAV_0353|M.avium_104 ITGDPDVSLTFKGLQPETIAEGLVKNPGVVVTANHCVNAIPDVCAAAPGI MUL_4353|M.ulcerans_Agy99 ITGNPSVSLVFKGLQPTSITEGLQRNPGVVATANHCANAIPVVCAADPGI MAB_4633|M.abscessus_ATCC_1997 ITGEPSYLLDLGSFS----ARGDHNYANLIATAMRVVNAVPAVVAAEAGI : * *. : . . . * .:: ** : .*::* . ** .*: Mb1088|M.bovis_AF2122/97 QSFFDLPLITGRAAPGLAR--- Rv1059|M.tuberculosis_H37Rv QSFFDLPLITGRAAPGLAR--- MMAR_4411|M.marinum_M QSFFDLPLITGRAAPELSN--- Mvan_4692|M.vanbaalenii_PYR-1 ATYLDLPLISGKAAPAKARAGI Mflv_2027|M.gilvum_PYR-GCK ATYLDLPLISGKAAPDRARTGS MSMEG_5286|M.smegmatis_MC2_155 ATYLDLPLFSAKAAPHLR---- TH_1493|M.thermoresistible__bu LTYLDMPLISGRAAPRLT---- MAV_0353|M.avium_104 KTYLDLPLFAGRPAPGLATS-- MUL_4353|M.ulcerans_Agy99 ATYLDLPLFAGRPARASRGLER MAB_4633|M.abscessus_ATCC_1997 RTTLDLPLITGKGRAV------ : :*:**::.: