For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MQVAVRTIRVAGVTLLATSTIAAAPALPTTGISPASRDVHLAATTAVIKPADFYRHIVVETTRNVGGLWG AFSAQPFPVAQVAVGNQVAFVSDLVETVSGVLRGEYPPTEILAPIGDAVATASRNVVTVAAGLVAALPAL TISVVLPVVSTVVSAAFAVADIVRAVAHLDVVELVDAIVNVPGWIVNGFLNGTVIPNEAVPLAIPGFLTV ENGFLPVGPAATVIDRTQLVAEQMSRYPTTAPAEPDAGPVDEADVDSTDAVPSPPGEDADVPVDDDRVPA DGNEPAAPGAVELRGDVLDDLDVLAASEPAPETSTADTPSDAAAMIDPSDTTASEDGVPAEVSTRRAAES THRAVAAATPEGSPPSSPAARTE
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_4381 | - | - | 100% (373) | hypothetical protein Mvan_4381 |
| M. vanbaalenii PYR-1 | Mvan_1938 | - | 1e-24 | 29.06% (382) | hypothetical protein Mvan_1938 |
| M. vanbaalenii PYR-1 | Mvan_0052 | - | 4e-21 | 28.19% (337) | hypothetical protein Mvan_0052 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1068c | PPE15 | 1e-05 | 28.93% (121) | PPE family protein |
| M. gilvum PYR-GCK | Mflv_2285 | - | 1e-110 | 59.95% (372) | hypothetical protein Mflv_2285 |
| M. tuberculosis H37Rv | Rv1039c | PPE15 | 1e-05 | 28.93% (121) | PPE family protein |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_2973 | - | 5e-10 | 23.14% (242) | PE-PGRS family protein |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_5578 | - | 2e-08 | 25.00% (196) | hypothetical protein MSMEG_5578 |
| M. thermoresistible (build 8) | TH_3688 | - | 4e-18 | 23.65% (427) | PUTATIVE - |
| M. ulcerans Agy99 | MUL_1004 | - | 3e-06 | 27.32% (183) | hypothetical protein MUL_1004 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1068c|M.bovis_AF2122/97 --------------------------------------------------
Rv1039c|M.tuberculosis_H37Rv --------------------------------------------------
Mvan_4381|M.vanbaalenii_PYR-1 --------------------------------------------------
Mflv_2285|M.gilvum_PYR-GCK --------------------------------------------------
MSMEG_5578|M.smegmatis_MC2_155 MCLIEPARITISAFLNALMLRRSMTSRQLRERSGKSDSLRFFSGSFRCAR
TH_3688|M.thermoresistible__bu --------------------------------------------------
MMAR_2973|M.marinum_M --------------------------------------------------
MUL_1004|M.ulcerans_Agy99 --------------------------------------------------
Mb1068c|M.bovis_AF2122/97 ----------------MDFGALPPEINSARMYAGAGAGPM---MAAGAAW
Rv1039c|M.tuberculosis_H37Rv ----------------MDFGALPPEINSARMYAGAGAGPM---MAAGAAW
Mvan_4381|M.vanbaalenii_PYR-1 -----------MQVAVRTIRVAGVTLLATSTIAAAPALPT---TGISPAS
Mflv_2285|M.gilvum_PYR-GCK ------------MRAVHAARVAGATLLVTSMIAAAPPQPS---AVIGNAV
MSMEG_5578|M.smegmatis_MC2_155 AHIRTAYEGIFMEVAARSRLLAGAAIIGAGALVAAPIQPVPDVIAAPVIQ
TH_3688|M.thermoresistible__bu -----------MLSSIRPYATAGVALVGAGVIAVAPTVTP---PLPDIKV
MMAR_2973|M.marinum_M ------MSFLTVLPDMVATSAENLVDVCSTLGVANAAAAVPTTGIAAAAS
MUL_1004|M.ulcerans_Agy99 ----------MASTWSLSKGLAAVVVTSAAAFGLCPAAAAD--PAAPQPN
: .
Mb1068c|M.bovis_AF2122/97 NGLAAELGTTAASYESVITRLTTESWMGPASMAMVAAAQPY-LAWLTYTA
Rv1039c|M.tuberculosis_H37Rv NGLAAELGTTAASYESVITRLTTESWMGPASMAMVAAAQPY-LAWLTYTA
Mvan_4381|M.vanbaalenii_PYR-1 RDVHLAATTAVIKPADFYRHIVVETTRNVGGLWGAFSAQPF-PVAQVAVG
Mflv_2285|M.gilvum_PYR-GCK RDVHLSAATAPIAPSDFYRRIAEATADNAGELWRLFASQPF-PIAHVAAG
MSMEG_5578|M.smegmatis_MC2_155 SATPAVEMTALVNPIELWSAVISQAIANTGAIANTVLENPI-PIAHKVID
TH_3688|M.thermoresistible__bu PATVASPVQLTVSPIEFYTGLFERTTGNASALVEKFLANPA-PILSQIIE
MMAR_2973|M.marinum_M DEVSTAIATLFGSYAQEYQTLSARAAAFHDEFVSVLKGSGA-AYLSAEVA
MUL_1004|M.ulcerans_Agy99 PNPQLPGLPALAQLSPIIQQAAGNPEQATQLLMAAAQAFAHNPAAPTESR
. :
Mb1068c|M.bovis_AF2122/97 EAAAHAGSQAMASAAAYEAAYAMT------------------VPPEVVAA
Rv1039c|M.tuberculosis_H37Rv EAAAHAGSQAMASAAAYEAAYAMT------------------VPPEVVAA
Mvan_4381|M.vanbaalenii_PYR-1 NQVAFVSDLVETVSGVLRGEYPPT------------------EILAPIGD
Mflv_2285|M.gilvum_PYR-GCK NQVAFVSDFVDTVGGVLRGEYPLT------------------ELLAPVGD
MSMEG_5578|M.smegmatis_MC2_155 NQLITADVLTSFVALFGEGFVASAGGV-PAALQSAVEQILAGEIYSGVEN
TH_3688|M.thermoresistible__bu NQVANLEFAMEVIPTSINDAIEVFNTVGRAQLEIAFQQLAEGDLYGAVQT
MMAR_2973|M.marinum_M NAEQNLIKTVNAPARALLGHPLIP-----------------TDGSATAGP
MUL_1004|M.ulcerans_Agy99 NVASSVNQFVQEPVNPAPGSPPLG-------------------VPAPAAA
:
Mb1068c|M.bovis_AF2122/97 NRALLAALVATNVLGINTPAIMATEA----------------------LY
Rv1039c|M.tuberculosis_H37Rv NRALLAALVATNVLGINTPAIMATEA----------------------LY
Mvan_4381|M.vanbaalenii_PYR-1 AVATASRNVVTVAAGLVAALPALTIS----------------------VV
Mflv_2285|M.gilvum_PYR-GCK AIATASRNVVTVAVGLAAALPALTVT----------------------VA
MSMEG_5578|M.smegmatis_MC2_155 YAIAILTPVVEGALGALGQLDDISAV----------------------LQ
TH_3688|M.thermoresistible__bu VQNIMLPVALPLLEALGAPLRPIMMASDNLNRVVQQVIPSLILAGPIALI
MMAR_2973|M.marinum_M GTGVIGTAGLRTVDAVATAVRSGANATLG-------------------RV
MUL_1004|M.ulcerans_Agy99 PVEVAPPASAPVPHVPAPGAEPGTLAH---------------------LP
Mb1068c|M.bovis_AF2122/97 AEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLAAQSAAVG--S
Rv1039c|M.tuberculosis_H37Rv AEMWAQDALAMYGYAAASGAAGMLQPLSPPSQTTNPGGLAAQSAAVG--S
Mvan_4381|M.vanbaalenii_PYR-1 LPVVSTVVSAAFAVADIVRAVAHLDVVELVDAIVNVPGWIVNGFLNG--T
Mflv_2285|M.gilvum_PYR-GCK IPVLSTVISAAFAIADIVRAVVDLDVVELDDAIVNVPGWIVNGFLNG--T
MSMEG_5578|M.smegmatis_MC2_155 NPFLNAANVVGTVVSVPTLIGAGLPILFEALSPILQVGLTAQGVYDG--V
TH_3688|M.thermoresistible__bu GPINATMAAAVYVVQSIADGVMSGDPIEVVNALINAPGVVIDGFLNG--G
MMAR_2973|M.marinum_M TAAESVVAASATRVASAATLLPGHVAASVESVSASLPASLASLSLLG--S
MUL_1004|M.ulcerans_Agy99 AGIDPAHAAGPAPVAAPAGAPPASAPAPAAAAPASAPGTAPAPAAAPGPA
.
Mb1068c|M.bovis_AF2122/97 AAATAAVNQVSVADL-ISSLPNAVSGLASPVTS-VLDSTGLSGIIADIDA
Rv1039c|M.tuberculosis_H37Rv AAATAAVNQVSVADL-ISSLPNAVSGLASPVTS-VLDSTGLSGIIADIDA
Mvan_4381|M.vanbaalenii_PYR-1 VIPNEAV-PLAIPGF-LTVENGFLP--VGPAAT-VIDRT---QLVAEQMS
Mflv_2285|M.gilvum_PYR-GCK VIPNEAV-PLAIPGV-LASGNTPMA--RGPVAT-LIDRT---QHVADQMT
MSMEG_5578|M.smegmatis_MC2_155 TAGDLEAVANALISF-PSDMAGTILNGNPTIGN-SGLLGSELGLIPSLLT
TH_3688|M.thermoresistible__bu YGGVLNGGILSVAGMGPPGPIDLLLTFREQIAQ-ALVPQGPYAPTTSAAS
MMAR_2973|M.marinum_M TAAPAAQATVDIAAPYQELIENTAANLQSLGSTWAANPAPFLSQILANQL
MUL_1004|M.ulcerans_Agy99 PAAPAPAPAAAAPAPAPAPAAPPAAPVAAPVAAPAPVPAPAPAAAPAPEA
Mb1068c|M.bovis_AF2122/97 LLATPFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIE
Rv1039c|M.tuberculosis_H37Rv LLATPFVANIINSAVNTAAWYVNAAIPTAIFLANALNSGAPVAIAEGAIE
Mvan_4381|M.vanbaalenii_PYR-1 RYPTTAPAEPDAGPVDEADVDSTDAVP-------------SPPGEDADVP
Mflv_2285|M.gilvum_PYR-GCK RYPAAAPAEPD----DSTGEDAGDSV------------------EDADIP
MSMEG_5578|M.smegmatis_MC2_155 VRQSIADAIQPPAVSTLVGAKMESAPEVNSFTFTVDEDGELGEVTKSTTE
TH_3688|M.thermoresistible__bu AVEESAPPTAQVTKTTLGNNVVDVEVSATSLDTTTSSAAGPEGNSTPVAK
MMAR_2973|M.marinum_M GYGQTIATSLQNAAQDLGAVLYDPSALNRALADLSPISAIGGQIQQNLIN
MUL_1004|M.ulcerans_Agy99 AAPAPAPAPAPAAAPGFGPDAPPTQDFMYPSIGTNCLADGSNIIATALSV
.
Mb1068c|M.bovis_AF2122/97 AAEGAASAAAAGLADSVTPAGLGASL----------------GEATLVGR
Rv1039c|M.tuberculosis_H37Rv AAEGAASAAAAGLADSVTPAGLGASL----------------GEATLVGR
Mvan_4381|M.vanbaalenii_PYR-1 VDDDRVPADGNEPAAPGAVELRGDVL----------------DDLDVLAA
Mflv_2285|M.gilvum_PYR-GCK ADD-VQDLDSTDRRDTVDHPDDADHP----------------DDADAADA
MSMEG_5578|M.smegmatis_MC2_155 SGTTEGNGIQAIAAKSADAEDDATTG----------------TGTETEPE
TH_3688|M.thermoresistible__bu TGNDGAGSENPVEQVESEGLSDTGLS----------------DDDSTTAL
MMAR_2973|M.marinum_M LGGTALTDVAPAVAFVAAGPALSTLQGFGISLNAFTTAVQSGDIAGALGA
MUL_1004|M.ulcerans_Agy99 AGPATIPTPGPGPGQTAYVFTAVGTP-----------------GPAEVQR
Mb1068c|M.bovis_AF2122/97 LSVPAAWST-----------AAPATTAGATALEGSGWTVAAEEAGPVTGM
Rv1039c|M.tuberculosis_H37Rv LSVPAAWST-----------AAPATTAGATALEGSGWTVAAEEAGPVTGM
Mvan_4381|M.vanbaalenii_PYR-1 S--EPAPET-----------STADTPSDAAAMIDPSDTTASEDGVPAEVS
Mflv_2285|M.gilvum_PYR-GCK APEEPAPET-----------STAATPDEDG---ESSEAAVSET--PDTFS
MSMEG_5578|M.smegmatis_MC2_155 KSEKPVEKSKKPLVTLGNKFSPTTTAGDKARPGQRAEAALKSIGNEVNKT
TH_3688|M.thermoresistible__bu KNDESTTPSGG---------TDLSNGNKVSPTATTAATTQNGVAKNRGLT
MMAR_2973|M.marinum_M LVDAPAVLANGFLNGGVTLPLLLPIGLGFVVLDVPFDGILVAPHATTATV
MUL_1004|M.ulcerans_Agy99 LPLNVTWVN------------LTTGKSGSVTLKPRSDINPEGPTTLTGIA
.
Mb1068c|M.bovis_AF2122/97 MPGMASAAKGTGAYAGPRYGFKPTVMPKQVVV--------
Rv1039c|M.tuberculosis_H37Rv MPGMASAAKGTGAYAGPRYGFKPTVMPKQVVV--------
Mvan_4381|M.vanbaalenii_PYR-1 TRRAAESTHRAVAAATPEG--SPPSSPAARTE--------
Mflv_2285|M.gilvum_PYR-GCK TRRVDGTTHTAVSAATREA--NPPRIPAGRTQ--------
MSMEG_5578|M.smegmatis_MC2_155 VKKIGDGVKKALGVKGKKKADSKASSSSKDSAGSED----
TH_3688|M.thermoresistible__bu KASLGDATGGSSGGDSGSATGSSRTTAGSGNTGGSDSGDE
MMAR_2973|M.marinum_M TWFLPYFQEVVSGPTVGGIVSTLLTSVPQELATAITPA--
MUL_1004|M.ulcerans_Agy99 DTGSGSIMSTIFGQVTTKERQCQFMPTIGSTVVP------
.