For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTKKPSITDTEPVAPPSVPPLAADLDAGLRRLKLAAVRRTAPEVLITAKTQRWTPEEVLRTLIETELAAR DASNVVNRLKAAAFPVPKNLESFDVAASSIPPKTFDYLSSLEWIRAQQNLAIIGPAVING
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_3895 | - | - | 100% (130) | hypothetical protein Mvan_3895 |
M. vanbaalenii PYR-1 | Mvan_0481 | - | 2e-12 | 31.30% (131) | DNA replication protein-like |
M. vanbaalenii PYR-1 | Mvan_5932 | - | 2e-08 | 32.03% (128) | hypothetical protein Mvan_5932 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2969 | - | 9e-12 | 32.65% (98) | transposase |
M. gilvum PYR-GCK | Mflv_2875 | - | 6e-45 | 92.63% (95) | IstB ATP binding domain-containing protein |
M. tuberculosis H37Rv | Rv2943A | - | 1e-11 | 32.65% (98) | transposase |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_3532 | - | 3e-46 | 76.27% (118) | helper protein |
M. smegmatis MC2 155 | MSMEG_2150 | - | 1e-09 | 32.54% (126) | putative transposition helper protein |
M. thermoresistible (build 8) | TH_1648 | - | 4e-11 | 32.00% (125) | putative transposition helper protein |
M. ulcerans Agy99 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2875|M.gilvum_PYR-GCK ------------------------------------MKLAAVRRTAPEVL MAV_3532|M.avium_104 ----------MTTAAKPVAPSSAAPLAADLDAALRRLKLATVRRNAAEVL Mvan_3895|M.vanbaalenii_PYR-1 -----MTKKPSITDTEPVAPPSVPPLAADLDAGLRRLKLAAVRRTAPEVL MSMEG_2150|M.smegmatis_MC2_155 MTPTPRTAKN-TATVTEEPPSTAASRYQKLRSHLAELKLHAAAAALPAVL TH_1648|M.thermoresistible__bu MTPTPRTPKTATTTTVEESPSAAASRYQQLRSHLAELKLAAAAEALPAVL Mb2969|M.bovis_AF2122/97 --------------MPTTKATQRRDVSTEIAYLTRALKAPTLRESVSRLA Rv2943A|M.tuberculosis_H37Rv --------------MPTTKATQRRDVSTEIAYLTRALKAPTLRESVSRLA :* : . : Mflv_2875|M.gilvum_PYR-GCK ITAKTQRWTPEEVLRTLVETELAARDASNVVNRLKTAAFPVPKTLESFEV MAV_3532|M.avium_104 QVAKTQRWTPEEILRTLVEAEIAARDASNTANRLKAAAFPVTKTLDGFDV Mvan_3895|M.vanbaalenii_PYR-1 ITAKTQRWTPEEVLRTLIETELAARDASNVVNRLKAAAFPVPKNLESFDV MSMEG_2150|M.smegmatis_MC2_155 DQASAENLSLTVALERLLAVEVEASTARRLAGRLRFACLPTPATLDDFDV TH_1648|M.thermoresistible__bu DEATAEGLSLTVALERLLAVEVEASTARRLAGRLRFACLPTPATLADFDV Mb2969|M.bovis_AF2122/97 DRARAENWSHEEYLAACLQREVSARESHGGEGRIRAARFPARKSLEEFDF Rv2943A|M.tuberculosis_H37Rv DRARAENWSHEEYLAACLQREVSARESHGGEGRIRAARFPARKSLEEFDF * :: : * : *: * : .*:: * :*. .* *:. Mflv_2875|M.gilvum_PYR-GCK AASS-IQPKVFDYLSSLEWIRTQQNLAIIGPAGTGKSHTLIGLGTAAIHA MAV_3532|M.avium_104 TGSS-ITAATFDYLSSLEWIRAQQNLAVIGPPGTGKSHLLIGCGHAAVHA Mvan_3895|M.vanbaalenii_PYR-1 AASS-IPPKTFDYLSSLEWIRAQQNLAIIGP---------------AVIN MSMEG_2150|M.smegmatis_MC2_155 DAAAGIDRKLIDELGTCRYLESATNILLVGPPGTGKTHLSVGLARAAAHA TH_1648|M.thermoresistible__bu DAAAGIDRKLIDELGTCRYLESATNILLIGPPGTGKTHLSVGLARAAAHA Mb2969|M.bovis_AF2122/97 EHARGLKRDTIAHLGTLDFITARDNVVFLGPAWHRED-------SSCGRP Rv2943A|M.tuberculosis_H37Rv EHARGLKRDTIAHLGTLDFITARDNVVFLGPAWHRED-------SSCGRP : : : *.: :: : *: .:** . Mflv_2875|M.gilvum_PYR-GCK GHKVRYFTAADLVETLYRGLADNTVGKIIESLLRVDLIILDELGFAPLDD MAV_3532|M.avium_104 GFKVRYFTAADLIEVLYRGLADNTVGKIIDTLLRADLVILDEIGFAPLDD Mvan_3895|M.vanbaalenii_PYR-1 G------------------------------------------------- MSMEG_2150|M.smegmatis_MC2_155 GYRTYFTTAADLAARCHRAAIEGRWATTMRFYAGPTLLVIDELGYLPLPA TH_1648|M.thermoresistible__bu GYRTYFTTAADLAARCHRAAIEGRWATTMRFYAGPTLLVIDELGYLPLPA Mb2969|M.bovis_AF2122/97 GDTRVSGRSSGAVRHRRRMGSTARRGSPRRAHLR------RTHPALPLSA Rv2943A|M.tuberculosis_H37Rv GDTRVSGRSSGAVRHRRRMGSTARRGSPRRAHLR------RTHPALPLSA * Mflv_2875|M.gilvum_PYR-GCK TGTQLLFRLVAGAYERRSLAIGSHWPFEQWGRFLPEQTTAVSILDRLLHH MAV_3532|M.avium_104 TGTQLLFRLVAAGYERRSLAIASHWPFEQWGRFLPEHTTAASILDRLLHH Mvan_3895|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_2150|M.smegmatis_MC2_155 EAASALFQVVSQRYLKTSIVITTNRGVGSWGEILGDTTVAAAMLDRLLHR TH_1648|M.thermoresistible__bu EAASALFQVVSQRYLKTSIVITTNRGVGAWGEILGDTTVAAAMLDRLLHR Mb2969|M.bovis_AF2122/97 PGG----------------------------------------------- Rv2943A|M.tuberculosis_H37Rv PGG----------------------------------------------- Mflv_2875|M.gilvum_PYR-GCK ATVVITDGDSYRMKDAKHRKEQPKPT--------- MAV_3532|M.avium_104 ASIVVTSGESYRMRHADHKKGAAKN---------- Mvan_3895|M.vanbaalenii_PYR-1 ----------------------------------- MSMEG_2150|M.smegmatis_MC2_155 SVVINLDGESYRLRDHQAAAETLRRATTGTRQALH TH_1648|M.thermoresistible__bu SVVINLDGESYRLRDHQAAAETLRRTTTGTRQPLH Mb2969|M.bovis_AF2122/97 ----------------------------------- Rv2943A|M.tuberculosis_H37Rv -----------------------------------