For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
STPVVVQTPAMASPWEGGADIEDVARIAEVADSLGFDYLTCSEHVAVPVDEAGLRGAVYWDPLATLGFLA ARTSRIRLATSVLVLGYHHPLEIAKRYGTLDRVSGGRLVLGVGVGSLRAEFEMLSAPWEDRGVRADDAIR ALRSSLSVSAPSYHGEFHRYQAMMVEPHAVQPRVPIWVGGRTARSLRRAVGLADGWMPFGLTPARIAEML AAVDIPDDFDIVLAVGPLDPRARDECLNRLRALRDVGATAVTCSLSASSAEHYCDQLASLRDLVDEL*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. vanbaalenii PYR-1 | Mvan_3368 | - | - | 100% (278) | luciferase family protein |
M. vanbaalenii PYR-1 | Mvan_5167 | - | 1e-39 | 36.53% (219) | luciferase family protein |
M. vanbaalenii PYR-1 | Mvan_2248 | - | 2e-25 | 34.39% (189) | luciferase family protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0965c | - | 2e-19 | 29.65% (199) | oxidoreductase |
M. gilvum PYR-GCK | Mflv_4544 | - | 1e-128 | 79.86% (278) | luciferase family protein |
M. tuberculosis H37Rv | Rv0940c | - | 2e-19 | 29.65% (199) | oxidoreductase |
M. leprae Br4923 | MLBr_00348 | - | 4e-11 | 28.14% (199) | putative coenzyme F420-dependent oxidoreductase |
M. abscessus ATCC 19977 | MAB_0366 | - | 2e-29 | 33.94% (274) | hypothetical protein MAB_0366 |
M. marinum M | MMAR_3440 | - | 8e-88 | 57.97% (276) | hypothetical protein MMAR_3440 |
M. avium 104 | MAV_3045 | - | 8e-36 | 34.93% (209) | hypothetical protein MAV_3045 |
M. smegmatis MC2 155 | MSMEG_2896 | - | 7e-93 | 60.87% (276) | hypothetical protein MSMEG_2896 |
M. thermoresistible (build 8) | TH_3565 | - | 1e-102 | 64.73% (275) | PUTATIVE luciferase family protein |
M. ulcerans Agy99 | MUL_2716 | - | 1e-86 | 57.25% (276) | hypothetical protein MUL_2716 |
CLUSTAL 2.0.9 multiple sequence alignment Mb0965c|M.bovis_AF2122/97 -------------MRFSYAEAMTDFTFYIPLAKAAEAAGYSSMTIP-DSI Rv0940c|M.tuberculosis_H37Rv -------------MRFSYAEAMTDFTFYIPLAKAAEAAGYSSMTIP-DSI Mvan_3368|M.vanbaalenii_PYR-1 ---------------MSTPVVVQTPAMASPWEGGADIEDVARIAEVADSL Mflv_4544|M.gilvum_PYR-GCK -----------MRIGLSTPVVVQTPAAASPWEAGAGIGDIARIAETADDL TH_3565|M.thermoresistible__bu -----------MRIGISTPVVMQMPGVASDWERTAGPDELARVAAAADDL MSMEG_2896|M.smegmatis_MC2_155 -------------MGLSTPVVVQVPQVASAWEATATVDDLVAIAQAADET MMAR_3440|M.marinum_M ------MSAAAAKLSIATPVVTLLPGVSAPWEKTASIEDLTQIAETADKL MUL_2716|M.ulcerans_Agy99 MLASIAMSAAAAKLSIATPVVTLLPGVSAPWEKTASIEDLTQIAETADKL MAB_0366|M.abscessus_ATCC_1997 -----------MKIGVVAPVELGVTAEPDKILEFARAAERLGFSEISVVE MAV_3045|M.avium_104 -----------MKFAFPVPHLMRLKAIAQPWEAAVTGPEQRRMMQCADRW MLBr_00348|M.leprae_Br4923 ---------------MVERANAMKLGLQLGYWAAQPPGNAAELVAAAEGA . . Mb0965c|M.bovis_AF2122/97 AYPFE--SDSKYPYTPDGNREFMDGKPFIETFVLTAALGAVTTRLRFNFF Rv0940c|M.tuberculosis_H37Rv AYPFE--SDSKYPYTPDGNREFMDGKPFIETFVLTAALGAVTTRLRFNFF Mvan_3368|M.vanbaalenii_PYR-1 GFDYL--TCSEHVAVPVDEAGLR-GAVYWDPLATLGFLAARTSRIRLATS Mflv_4544|M.gilvum_PYR-GCK GFDYL--TCSEHVAVPVGDAAVR-GATYWDPLATLGFLAARTARIRLATS TH_3565|M.thermoresistible__bu GFEFL--TCAEHVVVPEADAAVR-GATYWDPVATLGFLAAHTTRIRLATS MSMEG_2896|M.smegmatis_MC2_155 GFDFL--TCSEHVAIPRADAARR-GAVYWDPLSTLGFLAAHTRRIRLATA MMAR_3440|M.marinum_M GYYHL--TCSEHIALPAAEKRRR-GTRYWDPLATLGYLAARTQRIRLATN MUL_2716|M.ulcerans_Agy99 GYYHL--TCSEHIALPAAEKRRR-GTRYWDPLATLSYLAARTQRIRLATN MAB_0366|M.abscessus_ATCC_1997 HAVVIGDTQSTYPYSPTGQSHLPDDIDIPDPLELLSFVAAATTTLGLSTG MAV_3045|M.avium_104 GYDMI--AVPEHLVIPVDQVELS-GSHYLHSTTAQAFIAGATERVAINSC MLBr_00348|M.leprae_Br4923 GFDAV----------FTGEAWGS------DAYTPLAWWGSSTQRVRLGTS : .. . .. * : : Mb0965c|M.bovis_AF2122/97 VLKLPIRPPALVAKQAGSLAALIGNRVGLGVGTSPWPEDYELMGVPFAKR Rv0940c|M.tuberculosis_H37Rv VLKLPIRPPALVAKQAGSLAALIGNRVGLGVGTSPWPEDYELMGVPFAKR Mvan_3368|M.vanbaalenii_PYR-1 VLVLGYHHPLEIAKRYGTLDRVSGGRLVLGVGVGSLRAEFEMLSAPWEDR Mflv_4544|M.gilvum_PYR-GCK VLVLGYHHPLEIAKRYGTLDRVSGGRLILGVGVGSLQPEFDLLGAPWEER TH_3565|M.thermoresistible__bu VIVLGYHHPLEVAKRYGTVDRLSGGRVILGVGVGSLKAEFDLLDAAWSDR MSMEG_2896|M.smegmatis_MC2_155 VLVLSYHHPLELVKRYGTLDRLSCGRLVLGVGIGSLREEFDLIGAPWEKR MMAR_3440|M.marinum_M VLVLGYHHPLEIAKRYGTLDTVSNGRLILGVGVGSLKEEFDLIGAPFEDR MUL_2716|M.ulcerans_Agy99 VLVLGYHHPLEIAKRYGTLDTVSNGRLILGVGVGSLKEEFDLIGAPFENR MAB_0366|M.abscessus_ATCC_1997 VLVLPDHHPVVLAKRLATLDRLSRGRLRICAGVGWMREEIEACGGDFDRR MAV_3045|M.avium_104 VTILPLQHPIVLAKALATADWMSGGRMMVTFGVGWLAREFELLGVPFGER MLBr_00348|M.leprae_Br4923 VVQLSARTPTACAMAALTLDHLSGGRHILGLGVSGPQVVEGWYGQPFPKP * * : * . : : .* : * . . : Mb0965c|M.bovis_AF2122/97 GKRIDECIEIVRGLTTGDYFE-FHGEFYDIPKTKMTPAPTQP-------- Rv0940c|M.tuberculosis_H37Rv GKRIDECIEIVRGLTTGDYFE-FHGEFYDIPKTKMTPAPTQP-------- Mvan_3368|M.vanbaalenii_PYR-1 GVRADDAIRALRSSLSVSAPS-YHGEFHRYQAMMVEPHAVQPR------- Mflv_4544|M.gilvum_PYR-GCK GARADDAIRALRSSLSVAEPS-YDGDFYTFGGMVVEPHAEQPR------- TH_3565|M.thermoresistible__bu DARADEAIRALRASLSQSRPH-HDGEHYRYSGFIVEPCAVQDR------- MSMEG_2896|M.smegmatis_MC2_155 GARADDAIRALRASMGRAEPA-YEGPFYAFSEMTVLPHAERID------- MMAR_3440|M.marinum_M GARADDALRALRAALSVPEPR-YHGEFYSFRDMVVDPCAVQKR------- MUL_2716|M.ulcerans_Agy99 GARADDALRALRAALSVPEPR-YHGEFYSFRDMVVDPCAVQKR------- MAB_0366|M.abscessus_ATCC_1997 GRAADEAIAVMRALWSTDGPTSHDGEFYSFRNAYSYPKPVRPQG------ MAV_3045|M.avium_104 GRIADEYLAAIDELWTSDTPR-FDGRYVSFADIAFEPKPVQKPH------ MLBr_00348|M.leprae_Br4923 LSRTREYIDIVRQVWAREAPVVSDGQHYPLPLTGAGATGLGKALKPITHP : : : .* . . Mb0965c|M.bovis_AF2122/97 ----IPILVGGHADAALRRAAR-ADGWMHGGGDPDELDRLIARVKRLR-E Rv0940c|M.tuberculosis_H37Rv ----IPILVGGHADAALRRAAR-ADGWMHGGGDPDELDRLIARVKRLR-E Mvan_3368|M.vanbaalenii_PYR-1 ----VPIWVGGRTARSLRRAVGLADGWMPFGLTPARIAEMLAAVDIPDDF Mflv_4544|M.gilvum_PYR-GCK ----VPIWVGGRSRRSLRRAVGLADGWMPFGLRTMQIADMLATVDIPDGF TH_3565|M.thermoresistible__bu ----VPIWVGGRTRRSLRRAVTLGDGWMPFGISAAQISEWLGSVELPDGF MSMEG_2896|M.smegmatis_MC2_155 ----VPIWVGGRTEASLRRAVSLGDGWMPFGLRTSGIRALLDATPTPDGF MMAR_3440|M.marinum_M ----LPIWVGGRTLRSLRRATSLAEGWVPFGISLGEARDWLSRFDIGSGF MUL_2716|M.ulcerans_Agy99 ----LPIWVGGRTLRSLRRATSLAEGWVPFGISLGEARDWLSRFDIGSGF MAB_0366|M.abscessus_ATCC_1997 ----VPLYIGGHSKAAARRAGRLGSGFQPLGLVGDDLTAAVGVMRAAAVD MAV_3045|M.avium_104 ----LPVWIGGDADAALRRAARFGSGWWPFLTPPEQIAEKLDYIKSQPCY MLBr_00348|M.leprae_Br4923 LRADIPIMLGAEGPKNVALAAEICDGWLPIFFSPRMADMYNEWLDEGFAR :*: :*. * .*: Mb0965c|M.bovis_AF2122/97 EAG--------KTSPFEIHVISLDGFTVDGVKR---------------LE Rv0940c|M.tuberculosis_H37Rv EAG--------KTSPFEIHVISLDGFTVDGVKR---------------LE Mvan_3368|M.vanbaalenii_PYR-1 DIV--------LAVG-PLDPR-ARDECLNRLRA---------------LR Mflv_4544|M.gilvum_PYR-GCK DIV--------LPAG-PLDPR-EPSGCLTRLRA---------------LR TH_3565|M.thermoresistible__bu EVV--------LATS-ALDPLGDPDAARRRLDR---------------LR MSMEG_2896|M.smegmatis_MC2_155 EVV--------LSTGHAVDPIGDPAGTRKRLSG---------------LA MMAR_3440|M.marinum_M EVV--------LSSPEPLNPIGDPERTRHLLAD---------------LA MUL_2716|M.ulcerans_Agy99 EVV--------LSSPEPLNPIGDPERTRHLLAD---------------LA MAB_0366|M.abscessus_ATCC_1997 AGR--------DPRG--LDLVLGHGLHRVDQAA---------------LD MAV_3045|M.avium_104 DGRP-----FEVMHGLGTNRVGEGHVARRDVRDRPGMSAGQIVDRLGWLA MLBr_00348|M.leprae_Br4923 TGARRSREDFEICASAQIVVTEDRAAAFAGIKP------------FLALY * Mb0965c|M.bovis_AF2122/97 DKGVTDVIVGFRVPYTMGPDTEPLQTKIRNLEMFAENVIAKV-------- Rv0940c|M.tuberculosis_H37Rv DKGVTDVIVGFRVPYTMGPDTEPLQTKIRNLEMFAENVIAKV-------- Mvan_3368|M.vanbaalenii_PYR-1 DVGATAVTCSLSAS-----SAEHYCDQLASLRDLV--DEL---------- Mflv_4544|M.gilvum_PYR-GCK DVGATAVTCSVAAD-----STDHYCAQLASLRGIV--DEL---------- TH_3565|M.thermoresistible__bu ELGATAVTATVSAT-----SAAHYCEQLAALRDLAMGDAL---------- MSMEG_2896|M.smegmatis_MC2_155 DAGATVASCTISAS-----SAAHYRDQVARLSEIAGTVEGRGA------- MMAR_3440|M.marinum_M AHGATTICATFAHS-----SRQQYLDNLHALAELDSP------------- MUL_2716|M.ulcerans_Agy99 AHGATTICATFAHS-----SRQQYLDNLHALAELDSP------------- MAB_0366|M.abscessus_ATCC_1997 QAAHAGAGRMLLSASRRATTLEAVLEEMAGCATRLELGGPR--------- MAV_3045|M.avium_104 EQGVTVTAVPVPAVG----GVDEYLDYAQWVIEEIKPQLA---------- MLBr_00348|M.leprae_Br4923 MGGMGAEGTNFHADVYRRMGYAEVVDEVTALFRSNQKDKAAEIIPNELVD . . Mb0965c|M.bovis_AF2122/97 ------------------------------------------- Rv0940c|M.tuberculosis_H37Rv ------------------------------------------- Mvan_3368|M.vanbaalenii_PYR-1 ------------------------------------------- Mflv_4544|M.gilvum_PYR-GCK ------------------------------------------- TH_3565|M.thermoresistible__bu ------------------------------------------- MSMEG_2896|M.smegmatis_MC2_155 ------------------------------------------- MMAR_3440|M.marinum_M ------------------------------------------- MUL_2716|M.ulcerans_Agy99 ------------------------------------------- MAB_0366|M.abscessus_ATCC_1997 ------------------------------------------- MAV_3045|M.avium_104 ------------------------------------------- MLBr_00348|M.leprae_Br4923 STMIVGDVDYVCKQIAAWSAAGVTMMMVSASSVEQVRDLAGLF