For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. vanbaalenii PYR-1 Mvan_2893 (-)

annotation: ferredoxin
coordinates: 3065610 - 3066653
length: 347

LPMSDASRAVPLTVTEVIEESRDAISLVFSVPGEHRDRFGYRPGQFLTLRIPSEQTGSVARCYSLASSPH
TDDAPKVTVKRTDGGYGSNWLCDNVSVGATLESLPPSGLFTPRDLDADFLLWAAGSGITPVMSILKSVLT
AGTGRVVLCYANRDEASVIFAAELRDLAARYAGRFTVLHWLESIQGLPSHAQLSNFARLFTGYQSFICGP
APYMAVVKETLTDVGIPRDHIHLEVFQSLHGDPFADVPVEPFPDEGQAAEAEISIDGRVHHLRWPVGRNL
VDTMMAAGIEVPYSCREGNCGSCAATVIDGQVDLGNAAILEEQDIADGLFLACQACPLSDTVKIEF*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. vanbaalenii PYR-1Mvan_2893--100% (347)ferredoxin
M. vanbaalenii PYR-1Mvan_5309-e-10151.02% (343) ferredoxin
M. vanbaalenii PYR-1Mvan_4186-3e-5435.71% (336) ferredoxin

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3602hmp1e-10352.71% (351) hemoglobine-like protein
M. gilvum PYR-GCKMflv_1462-1e-10151.59% (345) ferredoxin
M. tuberculosis H37RvRv3571hmp1e-10352.71% (351) hemoglobine-like protein
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_0583c-1e-10453.59% (334) putative oxidoreductase
M. marinum MMMAR_5066hmp1e-10454.34% (346) flavodoxin reductase Hmp
M. avium 104MAV_0590-1e-10052.56% (352) oxidoreductase, electron transfer component
M. smegmatis MC2 155MSMEG_2893-1e-15575.85% (352) oxidoreductase, NAD/FAD-binding
M. thermoresistible (build 8)TH_0316-1e-14069.83% (348) POSSIBLE HEMOGLOBINE-RELATED PROTEIN HMP
M. ulcerans Agy99MUL_4142hmp1e-10454.34% (346) flavodoxin reductase Hmp

CLUSTAL 2.0.9 multiple sequence alignment


Mb3602|M.bovis_AF2122/97            --MTEAIG----DEPLGDHVLELQIAEVVDETDEARSLVFAVPDGSDDPE
Rv3571|M.tuberculosis_H37Rv         --MTEAIG----DEPLGDHVLELQIAEVVDETDEARSLVFAVPDGSDDPE
MMAR_5066|M.marinum_M               --MTDAIP----DEPLGSHVLELQIAEVVAETDDARSLVFAVPDGSDDPR
MUL_4142|M.ulcerans_Agy99           --MTDAIP----DEPLGSHVLELQIAEVVAETDDARSLVFAVPDGSDDPR
MAV_0590|M.avium_104                --MTEADSAQALDEPLGDHVLELQIAEVIAETDDARSLVFAVPDDDGDPD
Mflv_1462|M.gilvum_PYR-GCK          --MTDVAA----DEPLGAHVLELEIADVIDETSDARSLVFRSP---ADAP
MAB_0583c|M.abscessus_ATCC_199      --MT--------DVPLGKHVLEVRIAEVIEETADSRSLVFEIPDG-----
Mvan_2893|M.vanbaalenii_PYR-1       --MLPMSD--------ASRAVPLTVTEVIEESRDAISLVFSVP------G
MSMEG_2893|M.smegmatis_MC2_155      --MSDVES--------STRIARLTVTEVIDESHDARSLVFAVP------D
TH_0316|M.thermoresistible__bu      MVDAEISR--------GPRAVRLTVAAVIDESPDARSLVFEVP------E
                                                    . :   : :: *: *: :: ****  *       

Mb3602|M.bovis_AF2122/97            IPPRRLRYAPGQFLTLRVPSERTGSVARCYSLCSSPYTDDALAVTVKRTA
Rv3571|M.tuberculosis_H37Rv         IPPRRLRYAPGQFLTLRVPSERTGSVARCYSLCSSPYTDDALAVTVKRTA
MMAR_5066|M.marinum_M               IPPERLRYAPGQFLTLRVPSERTGSVARCYSLCSSPFTDDALTVTVKRTA
MUL_4142|M.ulcerans_Agy99           IPPERLRYAPGQFLTLRVPSERTGSVARCYSLCSSPFTDDALTVTVKRTA
MAV_0590|M.avium_104                IPPERLRYAPGQFLTLRVPSERTGSVARCYSLCSSPFTDDALTVTVKRTA
Mflv_1462|M.gilvum_PYR-GCK          VAPEKLRYSPGQFLTLRVPSEKTGSVARCYSLCSSPFTGDPLTVTIKRTA
MAB_0583c|M.abscessus_ATCC_199      -AADKFAYAPGQYLTLRIPSDRTGSVARCYSLSSSPHLDDRLAVTVKRTA
Mvan_2893|M.vanbaalenii_PYR-1       EHRDRFGYRPGQFLTLRIPSEQTGSVARCYSLASSPHTDDAPKVTVKRTD
MSMEG_2893|M.smegmatis_MC2_155      EHRDHFGYRPGQFLTLRIPSERTGSVARCYSLASSPHTDDAHKVTVKRTD
TH_0316|M.thermoresistible__bu      EHRTRFVYRPGQFLTLRIPGDRTGSVARCYSLASSPHTDDAMKVTVKRTD
                                        :: * ***:****:*.::**********.***. .*   **:*** 

Mb3602|M.bovis_AF2122/97            DGYASNWLCDHAQVGMRIHVLAPSGNFVPTTLDADFLLLAAGSGITPIMS
Rv3571|M.tuberculosis_H37Rv         DGYASNWLCDHAQVGMRIHVLAPSGNFVPTTLDADFLLLAAGSGITPIMS
MMAR_5066|M.marinum_M               DGYASNWLCDNAHQGMRIHVLAPSGNFVPKTLDDDFLLLAAGSGITPIMS
MUL_4142|M.ulcerans_Agy99           DGYASNWLCDNAHQGMRIHVLAPSGNFVPKTLDDDFLLLAAGSGITPIMS
MAV_0590|M.avium_104                DGYASNWLCDNARPGMRIHVLAPSGNFVPKTLGDDFLLMAAGSGITPIMS
Mflv_1462|M.gilvum_PYR-GCK          DGYASNWLCDNAHAGMKMHVLAPSGTFVPKNLDTDFLLLAAGSGITPMLA
MAB_0583c|M.abscessus_ATCC_199      DGYGSNWICDNAHAGMHMHVLAPSGVFVPKQLDNDFLLLAGGSGVTPMMA
Mvan_2893|M.vanbaalenii_PYR-1       GGYGSNWLCDNVSVGATLESLPPSGLFTPRDLDADFLLWAAGSGITPVMS
MSMEG_2893|M.smegmatis_MC2_155      GGYGSNWLCDNVSVGSTIESLPPSGVFTPASLDDDFLLWAAGSGITPVMS
TH_0316|M.thermoresistible__bu      GGYGSNWLCDNAEPGTTIEALPPAGTFTPASLDGAFLLWAAGSGITPVMS
                                    .**.***:**:.  *  :. *.*:* *.*  *.  *** *.***:**:::

Mb3602|M.bovis_AF2122/97            ICKSALAEGGGQVTLLYANRDDRSVIFGDALRELAAKYPDRLTVLHWLES
Rv3571|M.tuberculosis_H37Rv         ICKSALAEGGGQVTLLYANRDDRSVIFGDALRELAAKYPDRLTVLHWLES
MMAR_5066|M.marinum_M               ICKSTLAEGSGQVTLLYANRDERSVIFADALRELSAKYPDRLTVVHWLES
MUL_4142|M.ulcerans_Agy99           ICKSALAEGGGQVTLLYANRDERSVIFADALRELSAKYPDRLTVVHWLES
MAV_0590|M.avium_104                IAKSALSEGSGRVTLLYANRDERSVIFADALRELSAKYPDRLTVLHWLES
Mflv_1462|M.gilvum_PYR-GCK          ILKSALSEGSGHVTLVYANRDEKSVIFAETLRDLANKYPDRLTTIHWLES
MAB_0583c|M.abscessus_ATCC_199      ICKSALSQGSGKVVLIYANRDEQSVIFGAALRELAAKYPDRLTVIHWLES
Mvan_2893|M.vanbaalenii_PYR-1       ILKSVLTAGTGRVVLCYANRDEASVIFAAELRDLAARYAGRFTVLHWLES
MSMEG_2893|M.smegmatis_MC2_155      ILKSVLSAGSGRVILCYANRDERSVIFAAELRELAARHAGRLTVLHWLES
TH_0316|M.thermoresistible__bu      ILKSVLEAGTGRVILCYANRDERSVIFAGELRELAARHAGRFTVLHWLES
                                    * **.*  * *:* * *****: ****.  **:*: ::..*:*.:*****

Mb3602|M.bovis_AF2122/97            LQGLPSASALAKLVAPYTDRPVFICGPGPFMQAARDALAALKVPAQQVHI
Rv3571|M.tuberculosis_H37Rv         LQGLPSASALAKLVAPYTDRPVFICGPGPFMQAARDALAALKVPAQQVHI
MMAR_5066|M.marinum_M               LQGLPSATALAQLAAPFTGRTAFICGPGPFMEAARVALQTLDVPAGQVHI
MUL_4142|M.ulcerans_Agy99           LQGLPSATALAQLAAPFTGRTAFICGPGPFMEAARVALQTLDVPAGQVHI
MAV_0590|M.avium_104                LQGLPSVTALAQLAAPYTDRPVYICGPGAFMDSAREALETLKVPAAQIHI
Mflv_1462|M.gilvum_PYR-GCK          VQGLPSVSALTALFAPFTSREAFICGPGPFMAAAEEALTASGAAADKIHI
MAB_0583c|M.abscessus_ATCC_199      VQGLPSQQQLATLTAPFAEHEAFICGPGPFMDASEAALKGNGMPHDRVHI
Mvan_2893|M.vanbaalenii_PYR-1       IQGLPSHAQLSNFARLFTGYQSFICGPAPYMAVVKETLTDVGIPRDHIHL
MSMEG_2893|M.smegmatis_MC2_155      VQGLPTRAQLCGFAQLFSGYESFICGPEPFMAVVRAALTEAGVPRRRIHL
TH_0316|M.thermoresistible__bu      VQGLPTTAQMYRFARLFTDHESFVCGPEPFMAVVTAALTEAGVPRNQIHT
                                    :****:   :  :   ::    ::*** .:*     :*     .  ::* 

Mb3602|M.bovis_AF2122/97            EVFKSLESDPFAAVK---VDDSG---DEAPATAVVELDGQTHTVSWPRTA
Rv3571|M.tuberculosis_H37Rv         EVFKSLESDPFAAVK---VDDSG---DEAPATAVVELDGQTHTVSWPRTA
MMAR_5066|M.marinum_M               EVFKSLESDPFAAVT---VEDSA---AEPPATAVVELDGQTHTVSWPRSA
MUL_4142|M.ulcerans_Agy99           EVFKSLESDPFAAVT---VEDSA---AEPPATAVVELDGQTHTVSWPRSA
MAV_0590|M.avium_104                EVFKSLDSDPFAAVK---IEDTAE-GDEPPATAVVELDGETHTVSWPRNA
Mflv_1462|M.gilvum_PYR-GCK          EVFKSLDSDPFAAVT---IDDADDEGDSGPATVVVTLDGETHEVSWPRKA
MAB_0583c|M.abscessus_ATCC_199      EVFRSLESDPFAEVV---LAEPSD-DDEPPATATVELDGETHEVSWPRST
Mvan_2893|M.vanbaalenii_PYR-1       EVFQSLHGDPFAD-----VPVEPFPDEGQAAEAEISIDGRVHHLRWPVGR
MSMEG_2893|M.smegmatis_MC2_155      EVFQSLSGDPFAEDVPASGPAGPGTDAG-AAEAEIELDGTVHQLRWPRDR
TH_0316|M.thermoresistible__bu      EVFRSLTGDPFTDEP-VGEPDGTIADERPPAEAVVVLDGETHVCEWPRTA
                                    ***:** .***:                 .* . : :** .*   **   

Mb3602|M.bovis_AF2122/97            KLLDVLLAAGLDAPFSCREGHCGACACTLRAGKVNMGVNDVLEQQDLDEG
Rv3571|M.tuberculosis_H37Rv         KLLDVLLAAGLDAPFSCREGHCGACACTLRAGKVNMGVNDVLEQQDLDEG
MMAR_5066|M.marinum_M               KLLDVLLAAGLDAPFSCREGHCGACAATLRSGKVNMEVNDVLEQQDLDDG
MUL_4142|M.ulcerans_Agy99           KLLDVLLAAGLDAPFSCREGHCGACAATLRSGKVNMEVNDVLEQQDLDDG
MAV_0590|M.avium_104                KLLDVLLAKGLDAPFSCREGHCGACACTLRKGQVSMEVNDVLEQQDLDEG
Mflv_1462|M.gilvum_PYR-GCK          KLLDVLLNKGLDAPFSCREGHCGACAVLKKSGDIEMEVNDVLEQQDLDEG
MAB_0583c|M.abscessus_ATCC_199      VLLDVLLAKGLDAPFSCREGHCMTCACVLKDGKVRMLVNDALSQNDIDDG
Mvan_2893|M.vanbaalenii_PYR-1       NLVDTMMAAGIEVPYSCREGNCGSCAATVIDGQVDLGNAAILEEQDIADG
MSMEG_2893|M.smegmatis_MC2_155      NLVDTMLAAGVEVPYSCREGSCGSCAATVLDGEIERGDTPILDAQDIADG
TH_0316|M.thermoresistible__bu      TLLDTMLARGLDAPYSCREGNCGSCAATVLEGEVDRGHSDILDPQDVADG
                                     *:*.::  *::.*:***** * :**     *.:       *. :*: :*

Mb3602|M.bovis_AF2122/97            LILACQSRPESDSVEVTYDE
Rv3571|M.tuberculosis_H37Rv         LILACQSRPESDSVEVTYDE
MMAR_5066|M.marinum_M               LILACQSHPESDSVEVTYDE
MUL_4142|M.ulcerans_Agy99           LILACQSHPESDSVEVTYDE
MAV_0590|M.avium_104                LILACQSHPESDSVEVTYDD
Mflv_1462|M.gilvum_PYR-GCK          LILACQAHPTSDSVEVTFDE
MAB_0583c|M.abscessus_ATCC_199      YILACQAVPETDDVNVTFDE
Mvan_2893|M.vanbaalenii_PYR-1       LFLACQACPLSDTVKIEF--
MSMEG_2893|M.smegmatis_MC2_155      LFLACQARPVSDRIRIEF--
TH_0316|M.thermoresistible__bu      LILACQTRPNSDSVRIEF--
                                     :****: * :* :.: :