For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. vanbaalenii PYR-1 Mvan_2406 (-)

annotation: hydrogenase assembly chaperone hypC/hupF
coordinates: 2560722 - 2561030
length: 102

CLAVPGKIVSIDERDGTLMSIVDFGGVEKDVCLQYIPDAEVGQYVVVHVGFAIQRLDEESAIRTLAEFEH
LGVLKEEFADGFELAARQAGLANPNTNGVPR*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. vanbaalenii PYR-1Mvan_2406--100% (102)hydrogenase assembly chaperone hypC/hupF
M. vanbaalenii PYR-1Mvan_2360-4e-1959.72% (72) hydrogenase assembly chaperone hypC/hupF
M. vanbaalenii PYR-1Mvan_2408-5e-0728.00% (75) hydrogenase assembly chaperone hypC/hupF

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97-----
M. gilvum PYR-GCKMflv_3980-2e-4282.47% (97) hydrogenase assembly chaperone hypC/hupF
M. tuberculosis H37Rv-----
M. leprae Br4923-----
M. abscessus ATCC 19977-----
M. marinum MMMAR_1858hypC1e-0937.33% (75) hydrogenase maturation factor, HypC
M. avium 104-----
M. smegmatis MC2 155MSMEG_2274hypC2e-2558.14% (86) hydrogenase assembly chaperone HypC/HupF
M. thermoresistible (build 8)TH_0222hypC3e-1747.73% (88) hydrogenase assembly chaperone HypC/HupF
M. ulcerans Agy99-----

CLUSTAL 2.0.9 multiple sequence alignment


Mvan_2406|M.vanbaalenii_PYR-1       MCLAVPGKIVSIDERD-GTLMSIVDFGGVEKDVCLQYIPD--AEVGQYVV
Mflv_3980|M.gilvum_PYR-GCK          MCLAVPGRILSIHERD-GTTMSVVDFGGIRKNVCLQYLPD--AQVGQYVV
MSMEG_2274|M.smegmatis_MC2_155      MCLGIPGKVVAVWDEA-GTRMSTVDFGGTTKTVCLAYLPD--MQIGEYTI
TH_0222|M.thermoresistible__bu      MCLGIPGRIVEIWDEDSGARMARVAFPGEERTACLAYLPD--LQVGDYTI
MMAR_1858|M.marinum_M               MCLGIPGRIVEITDPE--NYLAKVDVSGVQRTISVRLLDEDTPQPDDWVL
                                    ***.:**::: : :      :: * . *  :  .:  : :   : .::.:

Mvan_2406|M.vanbaalenii_PYR-1       VHVGFAIQRLDEESAIRTLAEFEHLGVLKEEFADGFELAARQAGLANPNT
Mflv_3980|M.gilvum_PYR-GCK          VHVGFAIQRLDEESARRTLAEFAHLGVLDEEFADGFASAARQARLANPDT
MSMEG_2274|M.smegmatis_MC2_155      VHAGFAITRLDEASAQETLRMFKDLGVLDEELAEGVETA-----------
TH_0222|M.thermoresistible__bu      LHAGFALTRLDEDQAELTLATMAEYGV----FGDGSAVTA----------
MMAR_1858|M.marinum_M               VHVGFAMAKIDESEALLTLAAIKQLGEAYTAEMEAFDSSSIV--------
                                    :*.***: ::** .*  **  : . *       :.   :           

Mvan_2406|M.vanbaalenii_PYR-1       NG----VPR
Mflv_3980|M.gilvum_PYR-GCK          GARSESIP-
MSMEG_2274|M.smegmatis_MC2_155      ---------
TH_0222|M.thermoresistible__bu      ---------
MMAR_1858|M.marinum_M               ---------