For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VGKLCAEWSLTAGNIAVHEVHTRLVVRRRGPMTVPPMQPPGGRQSWPPNGPTPPSKPSRMPWILIGISLS AVLALVVGVLVWQGTSARGPGSSGPIGSTIGDDRSVRMLSEEDPVCDGWTGAADKLAKVQESWTSTDRST SATDWTPEQRAVIESVGSAMTSAADEFEVLLPRAEHIVLRELIAQTIVYLRLFVERIPSYVEVDSRIAGV AGNFSGAVTYMCSAVPLVPTNSGRVELAESHVADPNSLVPFITHRDIACERLVGLFDRQNAVLRGWAATD SSIPAAHWSAEQETLNRAARTVISGDVAEVQEVAAATDNGLMQDLLNAQALYMSAFADAIPTYAPDDAQL WSVATYLGGGLSAACKVEL
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_1756 | - | - | 100% (369) | hypothetical protein Mvan_1756 |
| M. vanbaalenii PYR-1 | Mvan_0086 | - | 6e-33 | 26.70% (352) | hypothetical protein Mvan_0086 |
| M. vanbaalenii PYR-1 | Mvan_0084 | - | 1e-24 | 25.93% (351) | hypothetical protein Mvan_0084 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1127c | - | 2e-06 | 30.00% (120) | hypothetical protein Mb1127c |
| M. gilvum PYR-GCK | Mflv_0759 | - | 6e-40 | 28.37% (356) | hypothetical protein Mflv_0759 |
| M. tuberculosis H37Rv | Rv1097c | - | 2e-06 | 30.00% (120) | hypothetical protein Rv1097c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_4369 | - | 1e-05 | 40.21% (97) | membrane glycine and proline rich protein |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_4599 | - | 6e-40 | 32.28% (316) | hypothetical protein MSMEG_4599 |
| M. thermoresistible (build 8) | TH_2900 | - | 2e-28 | 29.96% (247) | PUTATIVE hypothetical protein MSMEG_2820 |
| M. ulcerans Agy99 | MUL_0182 | - | 4e-05 | 42.31% (78) | membrane glycine and proline rich protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_0759|M.gilvum_PYR-GCK -------MSTPPGDRPPPPPGPPPGYPGGSPWGAAQPNGPRGRGAA----
TH_2900|M.thermoresistible__bu --------------------------------------------------
MSMEG_4599|M.smegmatis_MC2_155 --------------------------------------------------
Mb1127c|M.bovis_AF2122/97 --------------------------------------------------
Rv1097c|M.tuberculosis_H37Rv --------------------------------------------------
MMAR_4369|M.marinum_M --------------------------------------------------
MUL_0182|M.ulcerans_Agy99 --------------------------------------------------
Mvan_1756|M.vanbaalenii_PYR-1 MGKLCAEWSLTAGNIAVHEVHTRLVVRRRGPMTVPPMQPPGGRQSWPPNG
Mflv_0759|M.gilvum_PYR-GCK VWVLGGLAVLVVIVLTVAATLFVTGRQSEEAGPDPAKPSPTTAVDTSEIA
TH_2900|M.thermoresistible__bu ------------------------------------------------VA
MSMEG_4599|M.smegmatis_MC2_155 ------MAVVLAIALAVVVTVLVVRPDGGTVAAGNGAENSD-----AKLA
Mb1127c|M.bovis_AF2122/97 ------------------MTVPPAGPYGNYPYGPNTYGQDLYWGGQPQGG
Rv1097c|M.tuberculosis_H37Rv ------------------MTVPPAGPYGNYPYGPNTYGQDPYWGGQPQGG
MMAR_4369|M.marinum_M ------------------MTTPPGGPYGQDPAGYNPYGQAPYGYGQPQAG
MUL_0182|M.ulcerans_Agy99 ------------------MTTPPGGPYGQDPAGYNPYGQAPYGYGQPQAG
Mvan_1756|M.vanbaalenii_PYR-1 PTPPSKPSRMPWILIGISLSAVLALVVGVLVWQGTSARGPGSSGPIGSTI
Mflv_0759|M.gilvum_PYR-GCK SADDDGP-------------VEIITEDPTCSSWTTIVTAFVDASRNG-WD
TH_2900|M.thermoresistible__bu SANDTGP-------------VAIITEEPTCAPVRPILIVFSDAQQNG-WD
MSMEG_4599|M.smegmatis_MC2_155 SADDKGP-------------VKILTDDPTCDAWNTVLDEYSGVTKSIRWD
Mb1127c|M.bovis_AF2122/97 ---SYPP-----------------AYPPQQYP---------PGWPAGPYP
Rv1097c|M.tuberculosis_H37Rv ---SYPP-----------------AYPPQQYP---------PGWPAGPYP
MMAR_4369|M.marinum_M GQYPYPPTGPYTNPQGGAPSYGPGTYPPQQFPQAGQPYGTGPGWPTGPYS
MUL_0182|M.ulcerans_Agy99 GQYPYPPTGPYTNPQGGAPSYGPGTYPPQQFPQAGQPYGTGPGWPTGPYS
Mvan_1756|M.vanbaalenii_PYR-1 GDDRSVR--------------MLSEEDPVCDGWTG--AADKLAKVQESWT
* :
Mflv_0759|M.gilvum_PYR-GCK ARDPTSPAASWTPEQSRQYEAMGAAMQSIADRTVELAKRTPHRVMR-ILY
TH_2900|M.thermoresistible__bu RRDASIPASGWTHEVRVQYEEVGDAMRETADRLVPMVKLTPHRVVR-ELY
MSMEG_4599|M.smegmatis_MC2_155 DRDDSVPEGSWTPEQRAMYEAVGKAMTQAADQAVTLMGQTPHRDMR-VLY
Mb1127c|M.bovis_AF2122/97 PGPPPPGPGSKTPWLILAGLAVLGVILLVVILVIGLRGD--NKSTTATSP
Rv1097c|M.tuberculosis_H37Rv PGPPPPGPGSKTPWLILAGLAVLGVILLVVILVIGLRGD--NKSTTATSP
MMAR_4369|M.marinum_M PGPPPKGPGSKAPWLIIAGVAVLGVLALVVVLVFTLGGNKSNNAGPSGTP
MUL_0182|M.ulcerans_Agy99 PGPPPKGPGSKAPWLIIAGVAVLGVLALVVVLVFTLGGNKSNNAGPSGTP
Mvan_1756|M.vanbaalenii_PYR-1 STDRSTSATDWTPEQRAVIESVGSAMTSAADEFEVLLPRAEHIVLR-ELI
. . : : .: . : :
Mflv_0759|M.gilvum_PYR-GCK EQFVAYSRAYVGKLSTYTEQDDRFVRVAISFSGTLNAICDSIAFGAAGAR
TH_2900|M.thermoresistible__bu EQMIAYLRAYAQAIPRYRPADDFLARSGNAAADAISNICKSIEYGAAAAR
MSMEG_4599|M.smegmatis_MC2_155 EQFVATSREFVSRIPTYQPTDDELSAASNAAGAAIANICAAINRRTAQSV
Mb1127c|M.bovis_AF2122/97 ATS-APTSQP-FSQQTATGCTPNVSGGVQPIGDSISAGKLSFPTSAAPGW
Rv1097c|M.tuberculosis_H37Rv ATS-APTSQP-FSQQTATGCTPNVSGGVQPIGDSISAGKLSFPTSAAPGW
MMAR_4369|M.marinum_M ATSGDSTSEPDNSEQNATGCTPNVSAGERPLGEIISAGKLSFPISAAPGW
MUL_0182|M.ulcerans_Agy99 ATSGASTSEPDNSEQNATGCTPNVSAGERPLGEIISAGKLSFPISAAPGW
Mvan_1756|M.vanbaalenii_PYR-1 AQTIVYLRLFVERIPSYVEVDSRIAGVAGNFSGAVTYMCSAVP-------
. . : :.
Mflv_0759|M.gilvum_PYR-GCK APLVPGSAP--PRDLERELDPDNAKPFMTSPSSSCGQWLYATEKFTNDTA
TH_2900|M.thermoresistible__bu ARMVTPLAA--PEVLAPVGDIANPQRLLTEIDPVCAEWADAVSEFQRDAA
MSMEG_4599|M.smegmatis_MC2_155 APLVSDVTG--AEIGS--EDDQELTAVLSTPSPMCSDWKSLVARFHEDTT
Mb1127c|M.bovis_AF2122/97 SAFSDDQNPNLIDAVGVGHEVAGADQWMMQAEVAITNFVTTMDVAAQASK
Rv1097c|M.tuberculosis_H37Rv SAFSDDQNPNLIDAVGVGHEVAGADQWMMQAEVAITNFVTTMDVAAQASK
MMAR_4369|M.marinum_M SVFGDDQSPNLIGALGVGQEVPDASQWMMQAEVAVTNFVASMDVSEQASK
MUL_0182|M.ulcerans_Agy99 SVFGDDQSPNLIGALGVGQEVPDASQWMMQAEVAVTNFVASMDVSEQASK
Mvan_1756|M.vanbaalenii_PYR-1 --LVPTNSGRVELAESHVADPNSLVPFITHRDIACERLVGLFDRQNAVLR
: : : .
Mflv_0759|M.gilvum_PYR-GCK AWRGIDPNIPASELTADQRAVNAAVAPVMEAFATESQQLGRRSNNPIWAD
TH_2900|M.thermoresistible__bu AWGTTSPDIPASQWSSEQRALNDQVMPVMQTFADRLVALGQRTSNPTLRD
MSMEG_4599|M.smegmatis_MC2_155 AWRAIDKNIPATEWTPNQRAINDAAGRIMSATADEMEQLATASDNPRLQN
Mb1127c|M.bovis_AF2122/97 LMQCVADGPGYAGSSPTLGPTKTSSITVDGVRAARVDADITIADSS--RN
Rv1097c|M.tuberculosis_H37Rv LMQCVADGPGYAGSSPTLGPTKTSSITVDGVRAARVDADITIADSS--RN
MMAR_4369|M.marinum_M LMQCVVDGPGYVQSSPTLGPTKKSSTTVDGVKAARVDADITIADTS--RN
MUL_0182|M.ulcerans_Agy99 LMQCVVDGPGYVQSSPTLGPTKKSSTTVDGVKAARVDADITIADTS--RN
Mvan_1756|M.vanbaalenii_PYR-1 GWAATDSSIPAAHWSAEQETLNRAARTVISGDVAEVQEVAAATDNGLMQD
. :. . : : . . :.. :
Mflv_0759|M.gilvum_PYR-GCK LAALSAQYRRAYVSALVTYSPSDNDLQVAAGSTAGAISEACRIVMD-
TH_2900|M.thermoresistible__bu FAELSALYRSAYIEAIPTYMPADQYLTAASIRIAGVVNAACKALTNN
MSMEG_4599|M.smegmatis_MC2_155 IITLAAQYRRGFVKALPNYEPSDSYLELSATSLSRFVNAACAYRS--
Mb1127c|M.bovis_AF2122/97 VKGDSVTIIAVDTKPVTVFLGATPIGDATSRATVERVIEALKVNKS-
Rv1097c|M.tuberculosis_H37Rv VKGDSVTIIAVDTKPVTVFLGATPIGDATSRATVERVIEALKVNKS-
MMAR_4369|M.marinum_M VKGDSVVIIAVDTKPVTIFLGATPIGDAASAATISKVIAALKVDKS-
MUL_0182|M.ulcerans_Agy99 VKGDSVVIIAVDTKPVTIFLGATPIGDAASAATISKVIAALKVDKS-
Mvan_1756|M.vanbaalenii_PYR-1 LLNAQALYMSAFADAIPTYAPDDAQLWSVATYLGGGLSAACKVEL--
. . ..: : : : *