For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. vanbaalenii PYR-1 Mvan_0931 (-)

annotation: GntR family transcriptional regulator
coordinates: 962931 - 963659
length: 242

VPHRRHSVLLGSLTVERPGGSQQVILDELRRAILDGAVPPGTPIPLAEVAEHFGVSRIPVRESLKTLIGE
GLVAHRANSGYMVAQLTAAELGELYVARESLEAASLAAAVGNASEADFATAIDMNALLEHAIREDDAVAY
HRQSRRFHAALTGPSRMYRLLRMLETAWNLTEPVQPMVHVTPDDRIRLHADHGEMLQAFLTRDVERLLGA
AERHARRLNSVIATLSFETGLLAAEKDISSPQ
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. vanbaalenii PYR-1Mvan_0931--100% (242)GntR family transcriptional regulator
M. vanbaalenii PYR-1Mvan_0130-8e-1428.26% (184) GntR family transcriptional regulator
M. vanbaalenii PYR-1Mvan_1978-9e-1326.74% (187) GntR family transcriptional regulator

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0170c-2e-1228.02% (207) GntR family transcriptional regulator
M. gilvum PYR-GCKMflv_0715-8e-1125.97% (181) regulatory protein GntR, HTH
M. tuberculosis H37RvRv0165c-2e-1130.07% (143) GntR family transcriptional regulator
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_2933c-8e-5750.66% (229) GntR family transcriptional regulator
M. marinum MMMAR_0408-4e-1231.47% (143) GntR family transcriptional regulator
M. avium 104MAV_5020-5e-1227.57% (185) transcriptional regulator, GntR family protein
M. smegmatis MC2 155MSMEG_5731-3e-8570.69% (232) transcriptional regulator, GntR family protein
M. thermoresistible (build 8)TH_0156-4e-1529.12% (182) POSSIBLE TRANSCRIPTIONAL REGULATORY PROTEIN (PROBABLY
M. ulcerans Agy99MUL_3894-3e-1328.88% (187) GntR family transcriptional regulator

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_0715|M.gilvum_PYR-GCK          -----------------------------------MRAADAMNAPARART
TH_0156|M.thermoresistible__bu      -----------------------------------------MNAPITSRL
Mb0170c|M.bovis_AF2122/97           MIKHDVVWVTLWPERPNNKPPPSPRQVPGNPGPTLKVLASHVNAPLSAKP
Rv0165c|M.tuberculosis_H37Rv        MIKHDVVWVTLWPERPNNKPPPSPRQVPGNPGPTLKVLASHVNAPLSAKP
MMAR_0408|M.marinum_M               -----------------------------------------MNIPLSARR
MAV_5020|M.avium_104                ---------------------------------------------MSMQP
MUL_3894|M.ulcerans_Agy99           ----------------------------------------MTDPEFAARP
Mvan_0931|M.vanbaalenii_PYR-1       -----------------------------------------MPHRRHSVL
MSMEG_5731|M.smegmatis_MC2_155      -----------------------------------------MRPHRRSAL
MAB_2933c|M.abscessus_ATCC_199      ----------------------------------------MSRTFRYRRL
                                                                                      

Mflv_0715|M.gilvum_PYR-GCK          ---AGAVRREQLSDEVAARLRVEIMTGALRPESFIRLDETAARLGVSITP
TH_0156|M.thermoresistible__bu      GPNGGGRRRDQLSDEVAAQLRAEIMSGALRPGTYIRLDETAARLGVSITP
Mb0170c|M.bovis_AF2122/97           -RSQLPLRRAQLSDEVAGHLRAAIMSGALRSGTFIRLDETAAELGVSVTP
Rv0165c|M.tuberculosis_H37Rv        -RSQLPLRRAQLSDEVAGHLRAAIMSGALRSGTFIRLDETAAELGVSVTP
MMAR_0408|M.marinum_M               -KSRRPLRRAQLSDEVAGHLRAAIMSGTLRPGTFIRLDETAAELGVSITP
MAV_5020|M.avium_104                -RSRRPLRRAQLSDEVAGHLRAAIMSGALRPGTFIRLDETAAELGVSVTP
MUL_3894|M.ulcerans_Agy99           ----------QLSDDVARYVRKRIYEGNYAAGKYIRLDQLAAELGISVTP
Mvan_0931|M.vanbaalenii_PYR-1       LGSLTVERPGGSQQVILDELRRAILDGAVPPGTPIPLAEVAEHFGVSRIP
MSMEG_5731|M.smegmatis_MC2_155      LQQLVAVAP--SQQAVLDELRRAILDGGVPPGTPIPLAEVAEVFGVSQIP
MAB_2933c|M.abscessus_ATCC_199      INELRATRSGHDQTSVLDGLRRAILDGAAPPGSMIPIGEVADTYQISPIP
                                                .  :   :*  *  *   . . * : : *    :*  *

Mflv_0715|M.gilvum_PYR-GCK          VREALRTLRGEGMVELEPHRGHRVIPLSRNDIEDIFWLQSTIAQELAATA
TH_0156|M.thermoresistible__bu      IREALRTLRGEGMVQLEPHRGHVVAPLTRGDIEDIFWLQATIARKLTAAA
Mb0170c|M.bovis_AF2122/97           VREALLKLRGEGMVGLEPHRGHVVLPLTRQDIDDIFWLQATIAQELATSA
Rv0165c|M.tuberculosis_H37Rv        VREALLKLRGEGMVGLEPHRGHVVLPLTRQDIDDIFWLQATIAQELATSA
MMAR_0408|M.marinum_M               VREALLKLRGEGMVQLEPHRGHVVLPLTRQDIDDIFWLQATIARELAVTA
MAV_5020|M.avium_104                VREALLKLRGEGMVQLEPHRGHVVLPLTRQDIEDIFWLQATIAKELAAAA
MUL_3894|M.ulcerans_Agy99           VREALFALRAEGLVAQQPHRGFVVLPLTKRDLADVAYVQAHVGGELAARA
Mvan_0931|M.vanbaalenii_PYR-1       VRESLKTLIGEGLVAHRANSGYMVAQLTAAELGELYVARESLEAASLAAA
MSMEG_5731|M.smegmatis_MC2_155      VREALKTLIGEGLVAHRRNAGYTVALLTAQELREMYIVRETLESASLMAA
MAB_2933c|M.abscessus_ATCC_199      VREALKTLVAEGLVDHRANGGYRVAQLTLPELREIYFTRGVLERAALAQA
                                    :**:*  * .**:*  . : *. *  *:  :: ::   :  :       *

Mflv_0715|M.gilvum_PYR-GCK          TRRITEEQIEQLSRLNDTLASAVEQHDVQRIAQAEFEFHRTFNRAAGRVK
TH_0156|M.thermoresistible__bu      VDRITDAELDELTALNEALAAAVDRGVVGEVAAAMSAFHRVLHRTTGRIK
Mb0170c|M.bovis_AF2122/97           TAHITDVEIDELDRINNALAGAIGSGDAKTIASIEFAFHRVFNKASRRIK
Rv0165c|M.tuberculosis_H37Rv        TAHITDVEIDELDRINNALAGAIGSGDAKTIASIEFAFHRVFNKASRRIK
MMAR_0408|M.marinum_M               TERISEIDIGELEHINDALTAAVGAGDTEAIAALEFAFHRVLNQSSGRIK
MAV_5020|M.avium_104                TDHITDTEIDELDRINDALAAAVGSGDAETIAGLEFGFHRVFNQASGRIK
MUL_3894|M.ulcerans_Agy99           AINIGAAQLAELQQIQAQLEEAYAADDDERTVRLNHEFHRAINLAADSPR
Mvan_0931|M.vanbaalenii_PYR-1       VGNASEADFATAIDMNALLEHAIREDDAVAYHRQSRRFHAALTGPSRMYR
MSMEG_5731|M.smegmatis_MC2_155      VANATEADRDAAIAANAVLEQAIADDDAATYHRESRQFHAALTRPSRMHR
MAB_2933c|M.abscessus_ATCC_199      AARATPEDVDRALAEHQLLQQATVEDDARAFHVHSRRFHRALVLPCGMHR
                                    . .    :       :  *  *               ** .:  .    :

Mflv_0715|M.gilvum_PYR-GCK          LSWFLLHAARYLP--PQLFASDDDWGAQAVVSHAELIAALRRGDVDVVVE
TH_0156|M.thermoresistible__bu      LAWFLYHVARYMP--PQIYATDQQWGTATVARHRELIAALRRRDTETATR
Mb0170c|M.bovis_AF2122/97           LAWFLLNAARYMP--AQVFAADPRWGADAVNSHRQLIAALRRRDTAAVIE
Rv0165c|M.tuberculosis_H37Rv        LAWFLLNAARYMG--AGVRGRP----AMGRGRGEQSSAADRR---AAPPR
MMAR_0408|M.marinum_M               LAWFLLNAARYMP--AQLYASDPQWGAAAVDNHRQLIAALRRRDTAAVIE
MAV_5020|M.avium_104                LAWFLLNAARYMP--VLVYAADPQWGRAAVDNHRQLIAALRRRDTAAVIE
MUL_3894|M.ulcerans_Agy99           LSQLMSQITRYQP--ESVFPGIEHWPARAVKDHGQVLVALKKHDDKAART
Mvan_0931|M.vanbaalenii_PYR-1       LLRMLETAWNLTEPVQPMVHVTPDDRIRLHADHGEMLQAFLTRDVERLLG
MSMEG_5731|M.smegmatis_MC2_155      LLHMLEAAWNVTEPVQSMVHVRADERVQLHADHREMLDAFLMRDAERLVA
MAB_2933c|M.abscessus_ATCC_199      LLHMFEATWNLTEPFQVMRTVSASDQLQLHADHEAMITAAASRDIDTLLS
                                    *  ::    .       :                    *           

Mflv_0715|M.gilvum_PYR-GCK          LTRGQFTDGLHRLIAWLEQVGLWS---------------
TH_0156|M.thermoresistible__bu      VTVDLFTDSAQRLIAQLEKVGIWT---------------
Mb0170c|M.bovis_AF2122/97           HTVWQFTDGARRLTEALAETEVFG---------------
Rv0165c|M.tuberculosis_H37Rv        HSRR---NRAHRLAVHRWGTQADGGPG------------
MMAR_0408|M.marinum_M               HSVWQFTDAAHRLTQMLETNGIFN---------------
MAV_5020|M.avium_104                HTVWQFTDAAARLTAMRDRTGTPSNRG------------
MUL_3894|M.ulcerans_Agy99           AMSEHLASSAVPLIDHLIARGVVAESAPSGSAAERARGG
Mvan_0931|M.vanbaalenii_PYR-1       AAERHARRLNSVIATLSFETGLLAAEKDISSPQ------
MSMEG_5731|M.smegmatis_MC2_155      ASEAHAARLNAVIAVLPTGTGLLA---------------
MAB_2933c|M.abscessus_ATCC_199      VAATHHDRLESVIVAAAGQLDVVAEA-------------
                                                :