For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MRNSPAKVEPDDGDAAHSAGADAQPPSPEKTSKSASGCEAAVAPECLDRDDVASIADRRGTFVRMLGFWL LPSIALLLALGAAYFKYQEGTASDEDRARVETVQVATEATVAMLSYTPETAAEKLKAARDRLTGPFRGSY TSLTEDVVIPGAQQQRISATARVSAAASVSVSKNRAIVMVFVDQTTTVGKDAPTETDSVVQVSLDKVGSH WLISGFEPK
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. vanbaalenii PYR-1 | Mvan_0520 | - | - | 100% (219) | hypothetical protein Mvan_0520 |
| M. vanbaalenii PYR-1 | Mvan_4597 | - | 1e-45 | 47.69% (216) | hypothetical protein Mvan_4597 |
| M. vanbaalenii PYR-1 | Mvan_0918 | - | 7e-36 | 47.74% (155) | hypothetical protein Mvan_0918 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1397c | - | 2e-20 | 34.33% (201) | hypothetical protein Mb1397c |
| M. gilvum PYR-GCK | Mflv_0645 | - | 1e-120 | 99.54% (219) | hypothetical protein Mflv_0645 |
| M. tuberculosis H37Rv | Rv1973 | - | 1e-43 | 55.48% (155) | MCE associated membrane protein |
| M. leprae Br4923 | MLBr_02615 | - | 3e-08 | 26.35% (148) | hypothetical protein MLBr_02615 |
| M. abscessus ATCC 19977 | MAB_4146c | - | 3e-08 | 25.33% (150) | MCE-family protein |
| M. marinum M | MMAR_4045 | - | 2e-45 | 47.51% (221) | hypothetical protein MMAR_4045 |
| M. avium 104 | MAV_1970 | - | 1e-47 | 47.64% (212) | hypothetical protein MAV_1970 |
| M. smegmatis MC2 155 | MSMEG_0353 | - | 3e-38 | 50.00% (156) | hypothetical protein MSMEG_0353 |
| M. thermoresistible (build 8) | TH_4601 | - | 1e-48 | 52.97% (185) | PUTATIVE putative hypothetical protein Mflv_2108 |
| M. ulcerans Agy99 | MUL_3911 | - | 1e-45 | 47.51% (221) | hypothetical protein MUL_3911 |
CLUSTAL 2.0.9 multiple sequence alignment
Mvan_0520|M.vanbaalenii_PYR-1 ---------MRNSPAKVEPD------------------DGDAAHSAGADA
Mflv_0645|M.gilvum_PYR-GCK ---------MTNSPAKVEPD------------------DGDAAHSAGADA
Rv1973|M.tuberculosis_H37Rv --------------------------------------------------
MAV_1970|M.avium_104 MSRLTWPKRSKSAPEDVALD------------------ANEVTEVSTTEA
TH_4601|M.thermoresistible__bu --------------------------------------VTATTGIEGSET
MMAR_4045|M.marinum_M ----MAKGSAETSGDEVSGKPLPADEPGDEAQSNPAGADSDSDSDAEPDT
MUL_3911|M.ulcerans_Agy99 ----MAKGSAETSGDELSGKPLPADEPGDEAQSNPAGADSDSDSDAEPDT
MSMEG_0353|M.smegmatis_MC2_155 ----------MLAAQEVS--------------------------------
Mb1397c|M.bovis_AF2122/97 ---------MTDDVRDVNTET------------------TDATEVAEIDS
MAB_4146c|M.abscessus_ATCC_199 --------------------------------------------------
MLBr_02615|M.leprae_Br4923 -----MRNRWRLLAFDVVAP--------------------LVAIAALVMI
Mvan_0520|M.vanbaalenii_PYR-1 QPPSPEKTSKSASG-------CEAAVAPECLDRDDVASIADRRGTFVRML
Mflv_0645|M.gilvum_PYR-GCK QPPSPEKTSKSASG-------CEAAVAPECLDRDDVASIADRRGTFVRML
Rv1973|M.tuberculosis_H37Rv -------------------------------------------MSWSRVI
MAV_1970|M.avium_104 PGTDEAETETDTAADSTGDTTDETSAEPTEGTVGEDEPAAEWRVDWSRVV
TH_4601|M.thermoresistible__bu TGPAEADTVAGDTS----------------------------GRSWLRIV
MMAR_4045|M.marinum_M EPDSESDGEPDADA------PAETEDASQPEDSRPRRRRPHPKSSWAAVL
MUL_3911|M.ulcerans_Agy99 EPDSESDGEPDADA------PAETEDASQPEDSRPRRRRPHPKSSWAAVL
MSMEG_0353|M.smegmatis_MC2_155 --------EPEAAQ------PQS--------DSGPRRS--------VRVL
Mb1397c|M.bovis_AF2122/97 AAGEAGDSATEAFD-------TDSATESTAQKGQRHRDLWRMQVTLKPVP
MAB_4146c|M.abscessus_ATCC_199 -------------------------------------------MRWLARI
MLBr_02615|M.leprae_Br4923 GVVLDWPRWWVSACSVLVLLIVEGVGVNFWLLRRDSVTIGTDDDAPGLRL
Mvan_0520|M.vanbaalenii_PYR-1 GFWLLPSIALLLALGAAYFKYQEGTASDEDRARVETVQVATEATVAMLSY
Mflv_0645|M.gilvum_PYR-GCK GFWLLPSIALLLALGAAYFKYQEGTASDEDRARVETVQVATEATVAMLSY
Rv1973|M.tuberculosis_H37Rv AYGLLPGLALALTCGAGLLKWQDGAVRDAAVARAESVRAATDGTTALLSY
MAV_1970|M.avium_104 AFGVLPAIALLLAAAAGFFKWQDNSVRNTDIARIESVQTAKDSTIAMLSY
TH_4601|M.thermoresistible__bu THAVLPALIVVSALGAGYLKWMDGTADAVDRARVESVQAATDITIAMLSY
MMAR_4045|M.marinum_M AWVVLPSLALLLAITAGVLRWQYDTMRYAQIAGVQALQAAREGTVAMLSY
MUL_3911|M.ulcerans_Agy99 AWVVLPSLALLLAITAGVLRWQYDTMRYAQIAGVQALQAAREGTVAMLSY
MSMEG_0353|M.smegmatis_MC2_155 AYVVIPLLIVGLAACAGYLQWRSSSMRAAQAANVSAVPAATDSTIKMLSY
Mb1397c|M.bovis_AF2122/97 VILILLMLISGGATGWLYLEQYRPDQQTDSGAARAAGAAASDGTIALLSY
MAB_4146c|M.abscessus_ATCC_199 FVAVTVLVVVGLSAAAGGMYWHRVDTVASRAAGETLIKQAGKQIGSIFGY
MLBr_02615|M.leprae_Br4923 AVVSVCTAALCAAVLIGYMHWTSPD-RDFSLDSREVVQIATGMAEAMASF
: : * : .:
Mvan_0520|M.vanbaalenii_PYR-1 TPETAAEKLKAARDRLTGPFRGSYTSLTEDVVIPGAQQQRISATARVSAA
Mflv_0645|M.gilvum_PYR-GCK TPETAAEKLKAARDRLTGPFRGSYTSLTEDVVIPGAQQQRISATARVSAA
Rv1973|M.tuberculosis_H37Rv RPDTVQHDLESARSRLTGTFLDAYTQLTHDVVIPGAQQKQISAVATVAAA
MAV_1970|M.avium_104 KPDTVEQQLRSARDLLTGEFRDSYTSLITDVVIPGAKQQQISAEASIPAA
TH_4601|M.thermoresistible__bu QPDTVEEDLGAARDRMTGEFRDSYTSLTNDVVIPGAREKRISTVATVPAA
MMAR_4045|M.marinum_M KPETVEKDLTAAQDHLTGTFRDSYTQLTKDVVIPGAKQQRISAVARVPAA
MUL_3911|M.ulcerans_Agy99 KPETVEKDLTAAQDHLTGTFRDSYTQLTKDVVIPGAKQQRISAVARVPAA
MSMEG_0353|M.smegmatis_MC2_155 KPDTVQKDLELAAEGLTGPFRDDYNSLIHDVVIPGAQEKQISAVATVPAA
Mb1397c|M.bovis_AF2122/97 SPDTLDQDFATARSHLAGDFLSYYDQFTQQIVAPAAKQKSLKTTAKVVRA
MAB_4146c|M.abscessus_ATCC_199 DYQTVERSLDEQYAGLTPEYRREFEDKANREIIPQAKQRKIVSQTSIVGT
MLBr_02615|M.leprae_Br4923 TPSAPTSSIDRAAAMIMPDQAGVFKEQYRKSSADLAR-RNVTAQASVLAA
.: .: : : . *: : : : : : :
Mvan_0520|M.vanbaalenii_PYR-1 ASVSVSKNRAIVMVFVDQTTTVGKDA-PTETDSVVQVSLDKVGSHWLISG
Mflv_0645|M.gilvum_PYR-GCK ASVSVSKNRAIVMVFVDQTTTVGKDA-PTETDSVVQVSLDKVGSHWLISG
Rv1973|M.tuberculosis_H37Rv ASVSTSADRAVVLLFVNQTITVGKDA-PTTAASSVRVTLDNINGRWLISQ
MAV_1970|M.avium_104 ASVSADPREAVVLVFVNQTTIIGKSA-PTDTASTVRVTLNKAGDRWLISK
TH_4601|M.thermoresistible__bu ASVQASTDHAVVVVFVNQATTVGDDV-PTDTASTVRVTLEKVDDQWLMSG
MMAR_4045|M.marinum_M ATVSADWGHAVVLVFVDQTTVIGDDP-PTDMASTVRVKLDKVGDRWLISE
MUL_3911|M.ulcerans_Agy99 ATVSADWGHAVVLVFVDQTTVIGDDP-PTDMASTVRVKLDKVGDRWLISE
MSMEG_0353|M.smegmatis_MC2_155 AVVSATGNRAVVMVFVNQTTIVGADP-PTSTASTVRVTMDKVGERWLVSD
Mb1397c|M.bovis_AF2122/97 AVSELHPDSAVVLVFVDQSTTSKDSPNPSMAASSVMVTLAKVDGNWLITK
MAB_4146c|M.abscessus_ATCC_199 GIIAAHRDSAQVVVYMNRTITDQSRT-PVYDSSSIQVDYTRAGDKWLISY
MLBr_02615|M.leprae_Br4923 GVEAIGSSAASVAVILRVTQNTPGQP-PSQAAPAVRVTLIKRGSDWLVTD
. * * : : : * . : * . . **::
Mvan_0520|M.vanbaalenii_PYR-1 FEPK---
Mflv_0645|M.gilvum_PYR-GCK FEPK---
Rv1973|M.tuberculosis_H37Rv FEPI---
MAV_1970|M.avium_104 FEPV---
TH_4601|M.thermoresistible__bu FEPI---
MMAR_4045|M.marinum_M FQPI---
MUL_3911|M.ulcerans_Agy99 FQPI---
MSMEG_0353|M.smegmatis_MC2_155 FTPI---
Mb1397c|M.bovis_AF2122/97 FTPV---
MAB_4146c|M.abscessus_ATCC_199 ITPL---
MLBr_02615|M.leprae_Br4923 VLSINAR
. .