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M. gilvum PYR-GCK Mflv_4845 (-)

annotation: putative succinate dehydrogenase
coordinates: 5157300 - 5157803
length: 167

VTQASRPASGRAENAYDHISDRGGPAPVMQRSFDRPAGLDNPRAPRRSGGMPNFEKYTWLFMRFSGIVLV
FLALGHLFIMLMWENGVYRIDFNYVAQRWSSPFWQTWDLLLLWLAQLHGGNGMRTIIADYTRKDSTKFWL
NTLLALSMAFTLVLGTYVLLTFDASIS
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. gilvum PYR-GCKMflv_4845--100% (167)putative succinate dehydrogenase

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3346sdhD3e-7080.99% (142) succinate dehydrogenase hydrophobic membrane anchor subunit
M. tuberculosis H37RvRv3317sdhD7e-7080.28% (142) succinate dehydrogenase hydrophobic membrane anchor subunit
M. leprae Br4923MLBr_00698sdhD6e-6776.03% (146) putative succinate dehydrogenase hydrophobic membrane anchor
M. abscessus ATCC 19977MAB_3674-1e-7281.94% (144) succinate dehydrogenase, hydrophobic membrane anchor protein
M. marinum MMMAR_1202sdhD4e-7381.17% (154) succinate dehydrogenase (hydrophobic membrane anchor
M. avium 104MAV_4298-1e-6778.62% (145) succinate dehydrogenase hydrophobic membrane anchor protein
M. smegmatis MC2 155MSMEG_1671-1e-6575.86% (145) succinate dehydrogenase hydrophobic membrane anchor protein
M. thermoresistible (build 8)TH_2181sdhD9e-7388.57% (140) PROBABLE SUCCINATE DEHYDROGENASE (HYDROPHOBIC MEMBRANE
M. ulcerans Agy99MUL_1368sdhD2e-6983.57% (140) succinate dehydrogenase (hydrophobic membrane anchor
M. vanbaalenii PYR-1Mvan_1588-6e-8894.87% (156) putative succinate dehydrogenase

CLUSTAL 2.0.9 multiple sequence alignment


Mb3346|M.bovis_AF2122/97            MS-----------------------APVRQRSHDRPASLDNPRSPRRRAG
Rv3317|M.tuberculosis_H37Rv         MS-----------------------APVRQRSHDRPASLDNPRSPRRRAG
MLBr_00698|M.leprae_Br4923          MSNSDL----QLRPQVQPTCQKGQLAPVRQRSYDRPASLDNPRSPRRRAG
MAV_4298|M.avium_104                MSTPDL----QLGP--------GQIAPVKQRFYDRPASLDNPRSPRRRAG
MMAR_1202|M.marinum_M               MSAPDH----QLGR--------GEHAPVLQRSHDRPASLDNPRSPRRRAG
MUL_1368|M.ulcerans_Agy99           ---------------------------MLQRSHDRPASLDNPRSPRRRAS
Mflv_4845|M.gilvum_PYR-GCK          MTQASRPASGRAENAYDHISDRGGPAPVMQRSFDRPAGLDNPRAPRRSGG
Mvan_1588|M.vanbaalenii_PYR-1       MSSGKK----MAENPYDHISDRGGPAPVMQRSYDRPAGLDNPRSPRRAGG
TH_2181|M.thermoresistible__bu      ---------------------------VLETSHDRPAALDNPRAPRRRGG
MSMEG_1671|M.smegmatis_MC2_155      MS---------APGAGE--SRLGRPAPVMEREHDRPAALDHPRAPRKPRG
MAB_3674|M.abscessus_ATCC_1997      MTTP-------QTGSHTSVRASGRPAPVLERNYDRPAALDNPRAPRRGSG
                                                               : :  .****.**:**:**:  .

Mb3346|M.bovis_AF2122/97            MPNFEKFAWLFMRFSGVVLVFLAIGHLFIMLMWDNGVYRLDFNFVAQRWA
Rv3317|M.tuberculosis_H37Rv         MPNFEKFAWLFMRFSGVVLVFLAIGHVFIMLMWDNGVYRLDFNFVAQRWA
MLBr_00698|M.leprae_Br4923          IPNFEKFAWLFMRFSGVALVVLAFGHLFIMLMWDNGVYRIDFNFVAQRWS
MAV_4298|M.avium_104                IPNFEKFAWLFMRFSGVALFVLAIGHLFIMLMWDDGVYRIDFNYVAQRWA
MMAR_1202|M.marinum_M               MPNFEKYAWLFMRFSGVVLVFLALGHLFIGLMWENGVYRIDFNYVAQRWS
MUL_1368|M.ulcerans_Agy99           MPNFEKYAWLFMRFSGVVLVFLALGHLFIGLMWENGVYRIDFNYVAQRWS
Mflv_4845|M.gilvum_PYR-GCK          MPNFEKYTWLFMRFSGIVLVFLALGHLFIMLMWENGVYRIDFNYVAQRWS
Mvan_1588|M.vanbaalenii_PYR-1       MPNFEKYAWLFMRFSGIVLVFLALGHLFIMLMWENGVYRIDFNYVAERWS
TH_2181|M.thermoresistible__bu      MPNFEKYAWLFMRFSGIVLVFLALGHLFIMLMWENGVYRIDFNYVAERWQ
MSMEG_1671|M.smegmatis_MC2_155      IPYFEKYAWLFMRFSGIALVFLALGHLFIMLMWQDGVYRIDFNYVAERWA
MAB_3674|M.abscessus_ATCC_1997      MPNFEKYAWIFMRLSGVVLIFLALGHLFIMLMWDNGVYRLDFNFVAQRWA
                                    :* ***::*:***:**:.*..**:**:** ***::****:***:**:** 

Mb3346|M.bovis_AF2122/97            SPFWQTWDLLLLWLAQLHGGNGLRTIIDDYSRKDTTRFWLNSLLVLSMLF
Rv3317|M.tuberculosis_H37Rv         SPFWQTWDLLLLWLAQLHGGNGLRTIIDDYSRKDTTRFWLNSLLVLSMLF
MLBr_00698|M.leprae_Br4923          SPFWRFWDLALLWLAQVHGGNGLRNIIDDYSRKDHTRFWLNSLLLLSMGF
MAV_4298|M.avium_104                SPFWQFWDLALLWLAQLHGGNGLRTIIDDYSRKDSTRFWLNSLLLLSMGF
MMAR_1202|M.marinum_M               SPFWQTWDLLLLWLAQLHGGNGLRVIIDDYSRKDSTRFWLNSLLVVSIVF
MUL_1368|M.ulcerans_Agy99           SPFWQTWDLLLLWLAQLHGGNGLRVIIDDYSRKDSTRFWLNSLLVVSIVF
Mflv_4845|M.gilvum_PYR-GCK          SPFWQTWDLLLLWLAQLHGGNGMRTIIADYTRKDSTKFWLNTLLALSMAF
Mvan_1588|M.vanbaalenii_PYR-1       SPFWQTWDLLLLWLAQLHGGNGMRTIIADYSRKDSTKFWLNTLLALSMAF
TH_2181|M.thermoresistible__bu      SPFWQIWDLLLLWLAQLHGGNGMRTIIADYARKDSTRFWLNALLALSIVF
MSMEG_1671|M.smegmatis_MC2_155      SPFWQIWDMALLWLAMIHGANGMRTIIGDYARKNVTKFWLNSLLLLATGF
MAB_3674|M.abscessus_ATCC_1997      SPFWQTWDLLMLWLAQLHGGNGMRTIIADYTRKDSTRFWLNCLLALSIIF
                                    ****: **: :**** :**.**:* ** **:**: *:**** ** ::  *

Mb3346|M.bovis_AF2122/97            TLMLGTYVIVTFDPNIS-
Rv3317|M.tuberculosis_H37Rv         TLMLGTYVIVTFDPNIS-
MLBr_00698|M.leprae_Br4923          TLVLGSYVLLSFDPNIS-
MAV_4298|M.avium_104                TLVLGTYVLLTFDPNISG
MMAR_1202|M.marinum_M               TLALGSYVLLTFDANIS-
MUL_1368|M.ulcerans_Agy99           TLALGSYVLLTFDANIS-
Mflv_4845|M.gilvum_PYR-GCK          TLVLGTYVLLTFDASIS-
Mvan_1588|M.vanbaalenii_PYR-1       TLVLGTYVLLTFDATIS-
TH_2181|M.thermoresistible__bu      TLVLGTYVLLTFDANIS-
MSMEG_1671|M.smegmatis_MC2_155      TLVLGSYVLVTFDANIS-
MAB_3674|M.abscessus_ATCC_1997      TVVLGTYVLLTFNPNIG-
                                    *: **:**:::*:..*.