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M. ulcerans Agy99 MUL_1368 (sdhD)

annotation: succinate dehydrogenase (hydrophobic membrane anchor subunit) SdhD
coordinates: 1474462 - 1474884
length: 140

VLQRSHDRPASLDNPRSPRRRASMPNFEKYAWLFMRFSGVVLVFLALGHLFIGLMWENGVYRIDFNYVAQ
RWSSPFWQTWDLLLLWLAQLHGGNGLRVIIDDYSRKDSTRFWLNSLLVVSIVFTLALGSYVLLTFDANIS
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. ulcerans Agy99MUL_1368sdhD-100% (140)succinate dehydrogenase (hydrophobic membrane anchor subunit) SdhD

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3346sdhD2e-7286.43% (140) succinate dehydrogenase hydrophobic membrane anchor subunit
M. gilvum PYR-GCKMflv_4845-2e-6983.57% (140) putative succinate dehydrogenase
M. tuberculosis H37RvRv3317sdhD6e-7285.71% (140) succinate dehydrogenase hydrophobic membrane anchor subunit
M. leprae Br4923MLBr_00698sdhD1e-6782.86% (140) putative succinate dehydrogenase hydrophobic membrane anchor
M. abscessus ATCC 19977MAB_3674-8e-6778.42% (139) succinate dehydrogenase, hydrophobic membrane anchor protein
M. marinum MMMAR_1202sdhD6e-8099.29% (140) succinate dehydrogenase (hydrophobic membrane anchor
M. avium 104MAV_4298-2e-6782.86% (140) succinate dehydrogenase hydrophobic membrane anchor protein
M. smegmatis MC2 155MSMEG_1671-2e-6172.14% (140) succinate dehydrogenase hydrophobic membrane anchor protein
M. thermoresistible (build 8)TH_2181sdhD3e-7185.71% (140) PROBABLE SUCCINATE DEHYDROGENASE (HYDROPHOBIC MEMBRANE
M. vanbaalenii PYR-1Mvan_1588-2e-7085.00% (140) putative succinate dehydrogenase

CLUSTAL 2.0.9 multiple sequence alignment


MUL_1368|M.ulcerans_Agy99           ---------------------------MLQRSHDRPASLDNPRSPRRRAS
MMAR_1202|M.marinum_M               MSAPDH----QLGR--------GEHAPVLQRSHDRPASLDNPRSPRRRAG
Mb3346|M.bovis_AF2122/97            MS-----------------------APVRQRSHDRPASLDNPRSPRRRAG
Rv3317|M.tuberculosis_H37Rv         MS-----------------------APVRQRSHDRPASLDNPRSPRRRAG
MLBr_00698|M.leprae_Br4923          MSNSDL----QLRPQVQPTCQKGQLAPVRQRSYDRPASLDNPRSPRRRAG
MAV_4298|M.avium_104                MSTPDL----QLGP--------GQIAPVKQRFYDRPASLDNPRSPRRRAG
Mflv_4845|M.gilvum_PYR-GCK          MTQASRPASGRAENAYDHISDRGGPAPVMQRSFDRPAGLDNPRAPRRSGG
Mvan_1588|M.vanbaalenii_PYR-1       MSSGKK----MAENPYDHISDRGGPAPVMQRSYDRPAGLDNPRSPRRAGG
TH_2181|M.thermoresistible__bu      ---------------------------VLETSHDRPAALDNPRAPRRRGG
MSMEG_1671|M.smegmatis_MC2_155      MS---------APGAGE--SRLGRPAPVMEREHDRPAALDHPRAPRKPRG
MAB_3674|M.abscessus_ATCC_1997      MTTP-------QTGSHTSVRASGRPAPVLERNYDRPAALDNPRAPRRGSG
                                                               : :  .****.**:**:**:  .

MUL_1368|M.ulcerans_Agy99           MPNFEKYAWLFMRFSGVVLVFLALGHLFIGLMWENGVYRIDFNYVAQRWS
MMAR_1202|M.marinum_M               MPNFEKYAWLFMRFSGVVLVFLALGHLFIGLMWENGVYRIDFNYVAQRWS
Mb3346|M.bovis_AF2122/97            MPNFEKFAWLFMRFSGVVLVFLAIGHLFIMLMWDNGVYRLDFNFVAQRWA
Rv3317|M.tuberculosis_H37Rv         MPNFEKFAWLFMRFSGVVLVFLAIGHVFIMLMWDNGVYRLDFNFVAQRWA
MLBr_00698|M.leprae_Br4923          IPNFEKFAWLFMRFSGVALVVLAFGHLFIMLMWDNGVYRIDFNFVAQRWS
MAV_4298|M.avium_104                IPNFEKFAWLFMRFSGVALFVLAIGHLFIMLMWDDGVYRIDFNYVAQRWA
Mflv_4845|M.gilvum_PYR-GCK          MPNFEKYTWLFMRFSGIVLVFLALGHLFIMLMWENGVYRIDFNYVAQRWS
Mvan_1588|M.vanbaalenii_PYR-1       MPNFEKYAWLFMRFSGIVLVFLALGHLFIMLMWENGVYRIDFNYVAERWS
TH_2181|M.thermoresistible__bu      MPNFEKYAWLFMRFSGIVLVFLALGHLFIMLMWENGVYRIDFNYVAERWQ
MSMEG_1671|M.smegmatis_MC2_155      IPYFEKYAWLFMRFSGIALVFLALGHLFIMLMWQDGVYRIDFNYVAERWA
MAB_3674|M.abscessus_ATCC_1997      MPNFEKYAWIFMRLSGVVLIFLALGHLFIMLMWDNGVYRLDFNFVAQRWA
                                    :* ***::*:***:**:.*..**:**:** ***::****:***:**:** 

MUL_1368|M.ulcerans_Agy99           SPFWQTWDLLLLWLAQLHGGNGLRVIIDDYSRKDSTRFWLNSLLVVSIVF
MMAR_1202|M.marinum_M               SPFWQTWDLLLLWLAQLHGGNGLRVIIDDYSRKDSTRFWLNSLLVVSIVF
Mb3346|M.bovis_AF2122/97            SPFWQTWDLLLLWLAQLHGGNGLRTIIDDYSRKDTTRFWLNSLLVLSMLF
Rv3317|M.tuberculosis_H37Rv         SPFWQTWDLLLLWLAQLHGGNGLRTIIDDYSRKDTTRFWLNSLLVLSMLF
MLBr_00698|M.leprae_Br4923          SPFWRFWDLALLWLAQVHGGNGLRNIIDDYSRKDHTRFWLNSLLLLSMGF
MAV_4298|M.avium_104                SPFWQFWDLALLWLAQLHGGNGLRTIIDDYSRKDSTRFWLNSLLLLSMGF
Mflv_4845|M.gilvum_PYR-GCK          SPFWQTWDLLLLWLAQLHGGNGMRTIIADYTRKDSTKFWLNTLLALSMAF
Mvan_1588|M.vanbaalenii_PYR-1       SPFWQTWDLLLLWLAQLHGGNGMRTIIADYSRKDSTKFWLNTLLALSMAF
TH_2181|M.thermoresistible__bu      SPFWQIWDLLLLWLAQLHGGNGMRTIIADYARKDSTRFWLNALLALSIVF
MSMEG_1671|M.smegmatis_MC2_155      SPFWQIWDMALLWLAMIHGANGMRTIIGDYARKNVTKFWLNSLLLLATGF
MAB_3674|M.abscessus_ATCC_1997      SPFWQTWDLLMLWLAQLHGGNGMRTIIADYTRKDSTRFWLNCLLALSIIF
                                    ****: **: :**** :**.**:* ** **:**: *:**** ** ::  *

MUL_1368|M.ulcerans_Agy99           TLALGSYVLLTFDANIS-
MMAR_1202|M.marinum_M               TLALGSYVLLTFDANIS-
Mb3346|M.bovis_AF2122/97            TLMLGTYVIVTFDPNIS-
Rv3317|M.tuberculosis_H37Rv         TLMLGTYVIVTFDPNIS-
MLBr_00698|M.leprae_Br4923          TLVLGSYVLLSFDPNIS-
MAV_4298|M.avium_104                TLVLGTYVLLTFDPNISG
Mflv_4845|M.gilvum_PYR-GCK          TLVLGTYVLLTFDASIS-
Mvan_1588|M.vanbaalenii_PYR-1       TLVLGTYVLLTFDATIS-
TH_2181|M.thermoresistible__bu      TLVLGTYVLLTFDANIS-
MSMEG_1671|M.smegmatis_MC2_155      TLVLGSYVLVTFDANIS-
MAB_3674|M.abscessus_ATCC_1997      TVVLGTYVLLTFNPNIG-
                                    *: **:**:::*:..*.