For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MNRPYTAQSPYSLTPTERIRSGRASGRRGGGYGGSDVDELDRYGDSDTDALPPYRDYRPGDHDAHDAYDS DDYTDVENYDEYLDEARIDRRWMWIAGVAGAILFVAVITVSMILGGGDSGSVSATVAAPLPTSSAPEPSA APSPRAAAPASPSLPAETVTTVTPTAETPAPAPVAPSPLLPAPQAAPPPAAAAPGTVTYRITGNRALLDL VTIIYTDEQGALKTDVNAALPWTKTVVLNPGVTLSSVTATSVSGQLNCAILDANGSLIAVQNNNSIITNC TR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. gilvum PYR-GCK | Mflv_4674 | - | - | 100% (282) | hypothetical protein Mflv_4674 |
M. gilvum PYR-GCK | Mflv_2951 | - | 7e-25 | 32.61% (230) | hypothetical protein Mflv_2951 |
M. gilvum PYR-GCK | Mflv_2547 | - | 2e-17 | 32.75% (171) | hypothetical protein Mflv_2547 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3235 | - | 2e-38 | 43.24% (185) | hypothetical protein Mb3235 |
M. tuberculosis H37Rv | Rv3209 | - | 2e-38 | 43.24% (185) | hypothetical protein Rv3209 |
M. leprae Br4923 | MLBr_00813 | - | 2e-30 | 39.36% (188) | hypothetical protein MLBr_00813 |
M. abscessus ATCC 19977 | MAB_3529 | - | 3e-40 | 36.71% (237) | hypothetical protein MAB_3529 |
M. marinum M | MMAR_1348 | - | 2e-46 | 42.13% (254) | putative threonine and proline rich protein |
M. avium 104 | MAV_4157 | - | 6e-41 | 42.24% (232) | hypothetical protein MAV_4157 |
M. smegmatis MC2 155 | MSMEG_1932 | - | 3e-68 | 52.05% (292) | MmpS3 protein |
M. thermoresistible (build 8) | TH_1006 | - | 7e-27 | 64.63% (82) | CONSERVED HYPOTHETICAL THREONIN AND PROLINE RICH PROTEIN |
M. ulcerans Agy99 | MUL_2531 | - | 3e-36 | 52.67% (150) | putative threonine and proline rich protein |
M. vanbaalenii PYR-1 | Mvan_1793 | - | 1e-123 | 80.14% (282) | hypothetical protein Mvan_1793 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_4674|M.gilvum_PYR-GCK MNRPYTAQSPYSLTPTERIRSGRASGRRGGGYGGSDVDELDRYGDSDTDA Mvan_1793|M.vanbaalenii_PYR-1 MNKPYTAQSPYSLTPTERIRSPRG---RYGSYD----DDPDRYGDLDTDA MSMEG_1932|M.smegmatis_MC2_155 MTRPYSPYDTATTNRHGDHAPEPGSYHGSQGYGYGSGYGRGAYAG-DYQD TH_1006|M.thermoresistible__bu -------------------------------------------------- Mb3235|M.bovis_AF2122/97 ---------------------MALGAVATAVIIN-----------SGDST Rv3209|M.tuberculosis_H37Rv ---------------------MALGAVATAVIIN-----------SGDST MMAR_1348|M.marinum_M MLLRRRRISSRLVDAFEAPHIGLSARTSRSRPADWFITIGSNLARHAIAA MUL_2531|M.ulcerans_Agy99 ---------------------MATARPPRARLA---------FRRRGQSS MAV_4157|M.avium_104 MGTTLPHLDDRIRGYPDDDADDACDTDPYLNADYNWTGWPADSRWRPATA MLBr_00813|M.leprae_Br4923 ---------MRLTETTSIRRTTTTSYSGHPIVDG-----------RQVAA MAB_3529|M.abscessus_ATCC_1997 --MVGYRGDSRYSSDYEPYDDPYNSETAPQSTEYSGLDEDFEYRPPGSNE Mflv_4674|M.gilvum_PYR-GCK LPPYRDYRPGDHDAHDAYDSDDYTDVENYDEYLDEARIDRRWMWIAG--- Mvan_1793|M.vanbaalenii_PYR-1 LPPF----PG----------DDY-DAEDYDGYIDEERLDRRWMWIAG--- MSMEG_1932|M.smegmatis_MC2_155 YDDYVRADGGNGGFD-----DGY---DDPDIEFYEEPLDRRWIWVAG--- TH_1006|M.thermoresistible__bu -------------------------------------------------- Mb3235|M.bovis_AF2122/97 ST------------------------------------------------ Rv3209|M.tuberculosis_H37Rv ST------------------------------------------------ MMAR_1348|M.marinum_M LKRHRRVDTIGPISNSAHTQYDTVRDVEDYPDDESYGGYSDYGYQDSQDD MUL_2531|M.ulcerans_Agy99 LR-HR-----APLRHQRH-------------------------------- MAV_4157|M.avium_104 IVGAVVALGAIATAVIIN-------------------------------- MLBr_00813|M.leprae_Br4923 LLG----------------------------------------------- MAB_3529|M.abscessus_ATCC_1997 NWKWVASIAG---------------------------------------- Mflv_4674|M.gilvum_PYR-GCK ------------------------------------VAGAILFVAVITVS Mvan_1793|M.vanbaalenii_PYR-1 ------------------------------------VAGAILFVAVITAS MSMEG_1932|M.smegmatis_MC2_155 ------------------------------------VAGAILLVAVICTV TH_1006|M.thermoresistible__bu -------------------------------------------------- Mb3235|M.bovis_AF2122/97 -------------------------------------------------K Rv3209|M.tuberculosis_H37Rv -------------------------------------------------K MMAR_1348|M.marinum_M QDEYPDSYADLAWPADRRWRPVAAVLGVVVALGAITTALVINSGDSATTK MUL_2531|M.ulcerans_Agy99 -------------------------------------------------R MAV_4157|M.avium_104 ------------------------------------------SGDSASTK MLBr_00813|M.leprae_Br4923 ------------------------------------------------SV MAB_3529|M.abscessus_ATCC_1997 ---------------------------------------AVFAIAVIATA Mflv_4674|M.gilvum_PYR-GCK MILGGGDSGSVSATVAAPLPTSSAPEPS---AAPSPRAAAPASPSLPAET Mvan_1793|M.vanbaalenii_PYR-1 MILGGGDSGSVSATVASPLPSSSAPEPS---AAPAPRVAAPAVPSLPAET MSMEG_1932|M.smegmatis_MC2_155 VILGGGDSGSVSATVADPTQTSQPATTAPQDASSTPRPLPPVAPSLSPET TH_1006|M.thermoresistible__bu -------------------------------------------------- Mb3235|M.bovis_AF2122/97 AIVGAPAPRTVISTSPRPTAPTST---------SPHPSPSTLRPQLPPET Rv3209|M.tuberculosis_H37Rv AIVGAPAPRTVISTSPRPTAPTST---------SPHPSPSTLRPQLPPET MMAR_1348|M.marinum_M GKVGVPTPRTVISTTARTTAPSAPPRTAPYPSTSTRPGPGTSASQLPPET MUL_2531|M.ulcerans_Agy99 GRLPIPAP-------APGQAPALP-----------RPNS-------PPET MAV_4157|M.avium_104 ATVGASAPHSVTSAPATTKASVPP---------SASPSPSR---PLPAET MLBr_00813|M.leprae_Br4923 AALCAIATAVIINSGDNATTKAIVG----------APTPR------PVLT MAB_3529|M.abscessus_ATCC_1997 VVLSGGNDKPPAAAVTTPVPALTPVTTT----TAPPPPPSATSPAKPSTT Mflv_4674|M.gilvum_PYR-GCK VTTVTPTAETPAPAPVAPSP--LLPAPQAAP-----PPAAAAPGTVTYRI Mvan_1793|M.vanbaalenii_PYR-1 VTTVTPTAEIPTPAPTTPAP--LLPAPQAAP-----PPASAAPGTVTYRI MSMEG_1932|M.smegmatis_MC2_155 VTTVTPSPTAPA-ATAEPAP--VAPPAEAAP-----PPA-VNPRAVTYTV TH_1006|M.thermoresistible__bu -------------------------------------------------V Mb3235|M.bovis_AF2122/97 VTTVAPPGTGPTTVPTRTP--TAAPPQTAVP-----PPAPLNPRTVVYRV Rv3209|M.tuberculosis_H37Rv VTTVAPPGTGPTTVPTRTP--TAAPPQTAVP-----PPAPLNPRTVVYRV MMAR_1348|M.marinum_M FTTVTPPGAAPTWPPTAVAPLPGMQPLPAEP-----PSAALNPRTVIYRV MUL_2531|M.ulcerans_Agy99 FTTVTPPGAAPTWPPTAVAPLQGMQPLPAEP-----PSAALNPRTVIYRV MAV_4157|M.avium_104 FTTVTSPSAAPSVAPSLTPGVAPAQTPTAAPPLAAAPTVTVDPRTVVYSV MLBr_00813|M.leprae_Br4923 TPSIPLPATPSSTPPLLLLPDTATATIPHKA-----APPALHPRTVVYNV MAB_3529|M.abscessus_ATCC_1997 TVTSTPAQETPTAEPSTEAP--PPEPPPSNPMLPPEGQRPITPAAFAYYV : Mflv_4674|M.gilvum_PYR-GCK TGNRALLDLVTIIYTDEQGALKTDVNAALPWTKTVVLNPGVTLSSVTATS Mvan_1793|M.vanbaalenii_PYR-1 TGNRALLDLVTVIYTDAQGALQTDVNAALPWSKTIVLNPGVTLSSVTATS MSMEG_1932|M.smegmatis_MC2_155 TGNRQLIDLVTIVYTDERGALQTDINVALPWTKTVVLDPGVELKSVTATS TH_1006|M.thermoresistible__bu TGERPLLDVVTVVYTDAQGALQTDVNVALPWSKTIELNPGVELSSVTATS Mb3235|M.bovis_AF2122/97 TGTKQLFDLVNVVYTDARGFPVTDFNVSLPWTKMVVLNPGVQTESVVATS Rv3209|M.tuberculosis_H37Rv TGTKQLFDLVNVVYTDARGFPVTDFNVSLPWTKMVVLNPGVQTESVVATS MMAR_1348|M.marinum_M TGTKQLLDMVNIVYTDARGFPVTEFNVALPWTKMVVLNPGVQTESVVATS MUL_2531|M.ulcerans_Agy99 TGTKQLLDMVNIVYTDARGFPVTEFNVALPWTKMVVLNPGVQTESVVATS MAV_4157|M.avium_104 SGSKQLLDLVNVVYTDAHGVPQTEFNVSLPWSKVVVLEPGVQTESVVATS MLBr_00813|M.leprae_Br4923 TGMKELLDLVTVVYTDARGYPKTEFNVVLPWTKAVVLNLGVKTQSVVATS MAB_3529|M.abscessus_ATCC_1997 TGNQTPGDLLTITYTDGNGMTRTVLGASLPWTMIVTPSPGITGGSITATS :* : *::.: *** .* * ... ***: : . *: *:.*** Mflv_4674|M.gilvum_PYR-GCK VSGQLNCAILDANGSLIAVQNNNSIITNCTR Mvan_1793|M.vanbaalenii_PYR-1 MSGQLNCAILDANGSLIAAQNNNSIITNCTR MSMEG_1932|M.smegmatis_MC2_155 VAGQLNCSITDAAGNVLVNQANNTMIATCTQ TH_1006|M.thermoresistible__bu VSSRLNCSITDADGNTLVSHRANTIIATCTR Mb3235|M.bovis_AF2122/97 LYSRLNCSIVNTGAQTVVASTNNAIIATCTR Rv3209|M.tuberculosis_H37Rv LYSRLNCSIVNTGAQTVVASTNNAIIATCTR MMAR_1348|M.marinum_M IYGRLNCAIVNAQGQLVVASTNTSIIATCTR MUL_2531|M.ulcerans_Agy99 IYGRLNCAIVNAQGQLVVASTNTSIIATCTR MAV_4157|M.avium_104 FYGRLSCSIFNAAGQRVVASANASNMATCAR MLBr_00813|M.leprae_Br4923 FHSQLHCSIVNAEGQPVVASTNNAVIATCTR MAB_3529|M.abscessus_ATCC_1997 FASQVNCSITNSENQMLAVQNSNSIIARCAK . .:: *:* :: . :. : :: *::